Last updated on 2018-05-09 22:48:15 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.0 | 1.10 | 19.05 | 20.15 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.1.0 | 0.93 | 15.19 | 16.12 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.1.0 | 24.30 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.0 | 22.63 | OK | |||
| r-devel-windows-ix86+x86_64 | 1.1.0 | 3.00 | 51.00 | 54.00 | OK | |
| r-patched-linux-x86_64 | 1.1.0 | 1.13 | 18.16 | 19.29 | ERROR | |
| r-patched-solaris-x86 | 1.1.0 | 39.90 | OK | |||
| r-release-linux-x86_64 | 1.1.0 | 1.21 | 18.71 | 19.92 | ERROR | |
| r-release-windows-ix86+x86_64 | 1.1.0 | 3.00 | 51.00 | 54.00 | OK | |
| r-release-osx-x86_64 | 1.1.0 | OK | ||||
| r-oldrel-windows-ix86+x86_64 | 1.1.0 | 3.00 | 36.00 | 39.00 | OK | |
| r-oldrel-osx-x86_64 | 1.1.0 | OK |
Version: 1.1.0
Check: examples
Result: ERROR
Running examples in ‘CREAM-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: CREAM
> ### Title: CREAM is the main function for CORE identification
> ### Aliases: CREAM
>
> ### ** Examples
>
> CREAM(system.file("extdata", "A549_Chr21.bed", package = "CREAM"),
+ system.file("extdata", "A549_Chr21_COREs.bed", package = "CREAM"),
+ MinLength = 1000, peakNumMin = 2)
[1] "Please make sure there is no overlap between the input genomic regions. Overlap between the input regions may cause error."
[1] "Identifying window size for each Order"
[1] "Identifying COREs"
[1] "Filtering clusters of low order"
Warning in file(file, ifelse(append, "a", "w")) :
cannot open file '/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/CREAM/extdata/A549_Chr21_COREs.bed': Read-only file system
Error in file(file, ifelse(append, "a", "w")) :
cannot open the connection
Calls: CREAM -> write.table -> file
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.1.0
Check: examples
Result: ERROR
Running examples in ‘CREAM-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: CREAM
> ### Title: CREAM is the main function for CORE identification
> ### Aliases: CREAM
>
> ### ** Examples
>
> CREAM(system.file("extdata", "A549_Chr21.bed", package = "CREAM"),
+ system.file("extdata", "A549_Chr21_COREs.bed", package = "CREAM"),
+ MinLength = 1000, peakNumMin = 2)
[1] "Please make sure there is no overlap between the input genomic regions. Overlap between the input regions may cause error."
[1] "Identifying window size for each Order"
[1] "Identifying COREs"
[1] "Filtering clusters of low order"
Warning in file(file, ifelse(append, "a", "w")) :
cannot open file '/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/CREAM/extdata/A549_Chr21_COREs.bed': Read-only file system
Error in file(file, ifelse(append, "a", "w")) :
cannot open the connection
Calls: CREAM -> write.table -> file
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.1.0
Check: examples
Result: ERROR
Running examples in ‘CREAM-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: CREAM
> ### Title: CREAM is the main function for CORE identification
> ### Aliases: CREAM
>
> ### ** Examples
>
> CREAM(system.file("extdata", "A549_Chr21.bed", package = "CREAM"),
+ system.file("extdata", "A549_Chr21_COREs.bed", package = "CREAM"),
+ MinLength = 1000, peakNumMin = 2)
[1] "Please make sure there is no overlap between the input genomic regions. Overlap between the input regions may cause error."
[1] "Identifying window size for each Order"
[1] "Identifying COREs"
[1] "Filtering clusters of low order"
Warning in file(file, ifelse(append, "a", "w")) :
cannot open file '/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/CREAM/extdata/A549_Chr21_COREs.bed': Read-only file system
Error in file(file, ifelse(append, "a", "w")) :
cannot open the connection
Calls: CREAM -> write.table -> file
Execution halted
Flavor: r-patched-linux-x86_64
Version: 1.1.0
Check: examples
Result: ERROR
Running examples in ‘CREAM-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: CREAM
> ### Title: CREAM is the main function for CORE identification
> ### Aliases: CREAM
>
> ### ** Examples
>
> CREAM(system.file("extdata", "A549_Chr21.bed", package = "CREAM"),
+ system.file("extdata", "A549_Chr21_COREs.bed", package = "CREAM"),
+ MinLength = 1000, peakNumMin = 2)
[1] "Please make sure there is no overlap between the input genomic regions. Overlap between the input regions may cause error."
[1] "Identifying window size for each Order"
[1] "Identifying COREs"
[1] "Filtering clusters of low order"
Warning in file(file, ifelse(append, "a", "w")) :
cannot open file '/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/CREAM/extdata/A549_Chr21_COREs.bed': Read-only file system
Error in file(file, ifelse(append, "a", "w")) :
cannot open the connection
Calls: CREAM -> write.table -> file
Execution halted
Flavor: r-release-linux-x86_64