Last updated on 2018-05-17 10:46:57 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.3.2 | 5.23 | 299.65 | 304.88 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.3.2 | 4.65 | 275.98 | 280.63 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.3.2 | 394.85 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.3.2 | 387.40 | OK | |||
| r-devel-windows-ix86+x86_64 | 0.3.2 | 9.00 | 330.00 | 339.00 | ERROR | |
| r-patched-linux-x86_64 | 0.3.2 | 4.50 | 320.43 | 324.93 | ERROR | |
| r-patched-solaris-x86 | 0.3.2 | 530.70 | OK | |||
| r-release-linux-x86_64 | 0.3.2 | 4.09 | 313.75 | 317.84 | ERROR | |
| r-release-windows-ix86+x86_64 | 0.3.2 | 12.00 | 329.00 | 341.00 | OK | |
| r-release-osx-x86_64 | 0.3.2 | OK | ||||
| r-oldrel-windows-ix86+x86_64 | 0.3.2 | 10.00 | 285.00 | 295.00 | OK | |
| r-oldrel-osx-x86_64 | 0.3.2 | OK |
Version: 0.3.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [70s/70s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> suppressPackageStartupMessages(library(testthat))
> suppressPackageStartupMessages(library(pulsar))
>
> testthat::test_check("pulsar")
── 1. Failure: default config files are in search path (@test_batchtools.R#34)
basename(conf) not equivalent to `name`.
1/1 mismatches
x[1]: ".batchtools.conf.R"
y[1]: "batchtools.conf.R"
── 2. Failure: default config files are in search path (@test_batchtools.R#34)
dirname(conf) not equivalent to system.file("config", package = "pulsar").
1/1 mismatches
x[1]: "/home/hornik"
y[1]: "/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/pulsar/config"
── 3. Failure: default config files are in search path (@test_batchtools.R#35)
basename(conf) not equivalent to `name`.
Lengths differ: 0 is not 1
── 4. Failure: default config files are in search path (@test_batchtools.R#35)
dirname(conf) not equivalent to system.file("config", package = "pulsar").
Lengths differ: 0 is not 1
── 5. Failure: default config files are in search path (@test_batchtools.R#36)
basename(conf) not equivalent to `name`.
Lengths differ: 0 is not 1
── 6. Failure: default config files are in search path (@test_batchtools.R#36)
dirname(conf) not equivalent to system.file("config", package = "pulsar").
Lengths differ: 0 is not 1
── 7. Failure: default config files are in search path (@test_batchtools.R#37)
basename(conf) not equivalent to `name`.
Lengths differ: 0 is not 1
── 8. Failure: default config files are in search path (@test_batchtools.R#37)
dirname(conf) not equivalent to system.file("config", package = "pulsar").
Lengths differ: 0 is not 1
── 9. Failure: default config files are in search path (@test_batchtools.R#45)
length(batchtools:::findConfFile()) not equivalent to 0.
1/1 mismatches
[1] 1 - 0 == 1
── 10. Error: default config files are in search path (@test_batchtools.R#47) ─
unused argument (check.attributes = FALSE)
1: conftestbt(conf5) at testthat/test_batchtools.R:47
2: expect_equivalent(batchtools:::findConfFile(), conf) at testthat/test_batchtools.R:22
3: compare(act$val, exp$val, ..., check.attributes = FALSE)
── 11. Failure: default template files are in the search path (@test_batchtools.
basename(tmpl1) not equivalent to paste0(base, ".tmpl").
1/1 mismatches
x[1]: ".batchtools.simpletorque.tmpl"
y[1]: "simpletorque.tmpl"
── 12. Failure: default template files are in the search path (@test_batchtools.
dirname(tmpl1) not equivalent to system.file("templates", package = "pulsar").
1/1 mismatches
x[1]: "/home/hornik"
y[1]: "/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/pulsar/templat
y[1]: es"
── 13. Error: default template files are in the search path (@test_batchtools.R#
unused argument (check.attributes = FALSE)
1: templtestbt(tmpl3) at testthat/test_batchtools.R:88
2: expect_equivalent(pulsar::findTemplateFile(name), templ) at testthat/test_batchtools.R:64
3: compare(act$val, exp$val, ..., check.attributes = FALSE)
── 14. Error: batch.pulsar options (@test_batchtools.R#118) ───────────────────
unused argument (check.attributes = FALSE)
1: expect_equivalent(est$init.reg$work.dir, homedir) at testthat/test_batchtools.R:118
2: compare(act$val, exp$val, ..., check.attributes = FALSE)
══ testthat results ═══════════════════════════════════════════════════════════
OK: 146 SKIPPED: 0 FAILED: 14
1. Failure: default config files are in search path (@test_batchtools.R#34)
2. Failure: default config files are in search path (@test_batchtools.R#34)
3. Failure: default config files are in search path (@test_batchtools.R#35)
4. Failure: default config files are in search path (@test_batchtools.R#35)
5. Failure: default config files are in search path (@test_batchtools.R#36)
6. Failure: default config files are in search path (@test_batchtools.R#36)
7. Failure: default config files are in search path (@test_batchtools.R#37)
8. Failure: default config files are in search path (@test_batchtools.R#37)
9. Failure: default config files are in search path (@test_batchtools.R#45)
1. ...
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.3.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [62s/94s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> suppressPackageStartupMessages(library(testthat))
> suppressPackageStartupMessages(library(pulsar))
>
> testthat::test_check("pulsar")
── 1. Failure: default config files are in search path (@test_batchtools.R#34)
basename(conf) not equivalent to `name`.
1/1 mismatches
x[1]: ".batchtools.conf.R"
y[1]: "batchtools.conf.R"
── 2. Failure: default config files are in search path (@test_batchtools.R#34)
dirname(conf) not equivalent to system.file("config", package = "pulsar").
1/1 mismatches
x[1]: "/home/hornik"
y[1]: "/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/pulsar/config"
── 3. Failure: default config files are in search path (@test_batchtools.R#35)
basename(conf) not equivalent to `name`.
Lengths differ: 0 is not 1
── 4. Failure: default config files are in search path (@test_batchtools.R#35)
dirname(conf) not equivalent to system.file("config", package = "pulsar").
Lengths differ: 0 is not 1
── 5. Failure: default config files are in search path (@test_batchtools.R#36)
basename(conf) not equivalent to `name`.
Lengths differ: 0 is not 1
── 6. Failure: default config files are in search path (@test_batchtools.R#36)
dirname(conf) not equivalent to system.file("config", package = "pulsar").
Lengths differ: 0 is not 1
── 7. Failure: default config files are in search path (@test_batchtools.R#37)
basename(conf) not equivalent to `name`.
Lengths differ: 0 is not 1
── 8. Failure: default config files are in search path (@test_batchtools.R#37)
dirname(conf) not equivalent to system.file("config", package = "pulsar").
Lengths differ: 0 is not 1
── 9. Failure: default config files are in search path (@test_batchtools.R#45)
length(batchtools:::findConfFile()) not equivalent to 0.
1/1 mismatches
[1] 1 - 0 == 1
── 10. Error: default config files are in search path (@test_batchtools.R#47) ─
unused argument (check.attributes = FALSE)
1: conftestbt(conf5) at testthat/test_batchtools.R:47
2: expect_equivalent(batchtools:::findConfFile(), conf) at testthat/test_batchtools.R:22
3: compare(act$val, exp$val, ..., check.attributes = FALSE)
── 11. Failure: default template files are in the search path (@test_batchtools.
basename(tmpl1) not equivalent to paste0(base, ".tmpl").
1/1 mismatches
x[1]: ".batchtools.simpletorque.tmpl"
y[1]: "simpletorque.tmpl"
── 12. Failure: default template files are in the search path (@test_batchtools.
dirname(tmpl1) not equivalent to system.file("templates", package = "pulsar").
1/1 mismatches
x[1]: "/home/hornik"
y[1]: "/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/pulsar/templates
y[1]: "
── 13. Error: default template files are in the search path (@test_batchtools.R#
unused argument (check.attributes = FALSE)
1: templtestbt(tmpl3) at testthat/test_batchtools.R:88
2: expect_equivalent(pulsar::findTemplateFile(name), templ) at testthat/test_batchtools.R:64
3: compare(act$val, exp$val, ..., check.attributes = FALSE)
── 14. Error: batch.pulsar options (@test_batchtools.R#118) ───────────────────
unused argument (check.attributes = FALSE)
1: expect_equivalent(est$init.reg$work.dir, homedir) at testthat/test_batchtools.R:118
2: compare(act$val, exp$val, ..., check.attributes = FALSE)
══ testthat results ═══════════════════════════════════════════════════════════
OK: 146 SKIPPED: 0 FAILED: 14
1. Failure: default config files are in search path (@test_batchtools.R#34)
2. Failure: default config files are in search path (@test_batchtools.R#34)
3. Failure: default config files are in search path (@test_batchtools.R#35)
4. Failure: default config files are in search path (@test_batchtools.R#35)
5. Failure: default config files are in search path (@test_batchtools.R#36)
6. Failure: default config files are in search path (@test_batchtools.R#36)
7. Failure: default config files are in search path (@test_batchtools.R#37)
8. Failure: default config files are in search path (@test_batchtools.R#37)
9. Failure: default config files are in search path (@test_batchtools.R#45)
1. ...
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.3.2
Check: tests
Result: ERROR
Running 'testthat.R' [38s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> suppressPackageStartupMessages(library(testthat))
> suppressPackageStartupMessages(library(pulsar))
>
> testthat::test_check("pulsar")
-- 1. Error: default config files are in search path (@test_batchtools.R#47) --
[ENOENT] Failed to realize 'C:/Users/CRAN/.batchtools.conf.R': no such file or directory
1: conftestbt(conf5) at testthat/test_batchtools.R:47
2: expect_equivalent(batchtools:::findConfFile(), conf) at testthat/test_batchtools.R:22
3: quasi_label(enquo(object), label)
4: eval_bare(get_expr(quo), get_env(quo))
5: batchtools:::findConfFile()
6: fs::path_real(x)
7: realize_(old[!is_missing])
-- 2. Failure: default template files are in the search path (@test_batchtools.R
pulsar::findTemplateFile(name) not equivalent to `templ`.
1/1 mismatches
x[1]: "D:/temp/RtmporN01A/RLIBS_41b81f2930e2/pulsar/templates/simpletorque.tmpl"
y[1]: "C:/Users/CRAN/Documents/.batchtools.simpletorque.tmpl"
-- 3. Error: default template files are in the search path (@test_batchtools.R#9
unused argument (check.attributes = FALSE)
1: templtestbt(tmpl4) at testthat/test_batchtools.R:92
2: expect_equivalent(pulsar::findTemplateFile(name), templ) at testthat/test_batchtools.R:64
3: compare(act$val, exp$val, ..., check.attributes = FALSE)
-- 4. Error: batch.pulsar options (@test_batchtools.R#113) --------------------
[ENOENT] Failed to realize 'C:/Users/CRAN/.batchtools.conf.R': no such file or directory
1: suppressWarnings(est <- batch.pulsar(dat$data, huge::huge, fargs, rep.num = 3, lb.stars = TRUE,
wkdir = homedir)) at testthat/test_batchtools.R:113
2: withCallingHandlers(expr, warning = function(w) invokeRestart("muffleWarning"))
3: batch.pulsar(dat$data, huge::huge, fargs, rep.num = 3, lb.stars = TRUE, wkdir = homedir)
4: findConfFile(conffile)
5: getFromNamespace("findConfFile", "batchtools")()
6: fs::path_real(x)
7: realize_(old[!is_missing])
-- 5. Error: weird lambda path results in correct error or warning ------------
[ENOENT] Failed to realize 'C:/Users/CRAN/.batchtools.conf.R': no such file or directory
1: expect_warning(out <- pfun(dat$data, fun = fun, fargs = hargs, rep.num = 2, ...),
"lambda path")
2: quasi_capture(enquo(object), capture_warnings, label = label)
3: capture(act$val <- eval_bare(get_expr(quo), get_env(quo)))
4: withCallingHandlers(code, warning = function(condition) {
out$push(condition)
invokeRestart("muffleWarning")
})
5: eval_bare(get_expr(quo), get_env(quo))
6: pfun(dat$data, fun = fun, fargs = hargs, rep.num = 2, ...)
7: findConfFile(conffile)
8: getFromNamespace("findConfFile", "batchtools")()
9: fs::path_real(x)
10: realize_(old[!is_missing])
-- 6. Error: (unknown) (@test_pulsar.R#31) ------------------------------------
[ENOENT] Failed to realize 'C:/Users/CRAN/.batchtools.conf.R': no such file or directory
1: runtests(batch.pulsar, "batch.pulsar", dat, fun = huge::huge, fargs = list(verbose = FALSE,
scr = TRUE), conffile = conffile, cleanup = TRUE, seed = rseed, wkdir = homedir) at testthat/test_pulsar.R:31
2: pfun(dat$data, fun = fun, fargs = hargs, criterion = "stars", rep.num = 6, ...)
3: findConfFile(conffile)
4: getFromNamespace("findConfFile", "batchtools")()
5: fs::path_real(x)
6: realize_(old[!is_missing])
== testthat results ===========================================================
OK: 70 SKIPPED: 0 FAILED: 6
1. Error: default config files are in search path (@test_batchtools.R#47)
2. Failure: default template files are in the search path (@test_batchtools.R#88)
3. Error: default template files are in the search path (@test_batchtools.R#92)
4. Error: batch.pulsar options (@test_batchtools.R#113)
5. Error: weird lambda path results in correct error or warning
6. Error: (unknown) (@test_pulsar.R#31)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-windows-ix86+x86_64
Version: 0.3.2
Check: re-building of vignette outputs
Result: WARN
Error in re-building vignettes:
...
No optimal index selected for diss criterion
<sparse>[ <logic> ] : .M.sub.i.logical() maybe inefficient
<sparse>[ <logic> ] : .M.sub.i.logical() maybe inefficient
network: Classes for Relational Data
Version 1.13.0.1 created on 2015-08-31.
copyright (c) 2005, Carter T. Butts, University of California-Irvine
Mark S. Handcock, University of California -- Los Angeles
David R. Hunter, Penn State University
Martina Morris, University of Washington
Skye Bender-deMoll, University of Washington
For citation information, type citation("network").
Type help("network-package") to get started.
Attaching package: 'network'
The following objects are masked from 'package:igraph':
%c%, %s%, add.edges, add.vertices, delete.edges,
delete.vertices, get.edge.attribute, get.edges,
get.vertex.attribute, is.bipartite, is.directed,
list.edge.attributes, list.vertex.attributes,
set.edge.attribute, set.vertex.attribute
<sparse>[ <logic> ] : .M.sub.i.logical() maybe inefficient
Quitting from lines 176-177 (D:/temp/RtmporN01A/RLIBS_41b82cd4583/pulsar/CONTENT.Rmd)
Quitting from lines 44-49 (D:/temp/RtmporN01A/RLIBS_41b82cd4583/pulsar/CONTENT.Rmd)
Error: processing vignette 'pulsar.Rmd' failed with diagnostics:
[ENOENT] Failed to realize 'C:/Users/CRAN/.batchtools.conf.R': no such file or directory
Execution halted
Flavor: r-devel-windows-ix86+x86_64
Version: 0.3.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [69s/89s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> suppressPackageStartupMessages(library(testthat))
> suppressPackageStartupMessages(library(pulsar))
>
> testthat::test_check("pulsar")
── 1. Failure: default config files are in search path (@test_batchtools.R#34)
basename(conf) not equivalent to `name`.
1/1 mismatches
x[1]: ".batchtools.conf.R"
y[1]: "batchtools.conf.R"
── 2. Failure: default config files are in search path (@test_batchtools.R#34)
dirname(conf) not equivalent to system.file("config", package = "pulsar").
1/1 mismatches
x[1]: "/home/hornik"
y[1]: "/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pulsar/config"
── 3. Failure: default config files are in search path (@test_batchtools.R#35)
basename(conf) not equivalent to `name`.
Lengths differ: 0 is not 1
── 4. Failure: default config files are in search path (@test_batchtools.R#35)
dirname(conf) not equivalent to system.file("config", package = "pulsar").
Lengths differ: 0 is not 1
── 5. Failure: default config files are in search path (@test_batchtools.R#36)
basename(conf) not equivalent to `name`.
Lengths differ: 0 is not 1
── 6. Failure: default config files are in search path (@test_batchtools.R#36)
dirname(conf) not equivalent to system.file("config", package = "pulsar").
Lengths differ: 0 is not 1
── 7. Failure: default config files are in search path (@test_batchtools.R#37)
basename(conf) not equivalent to `name`.
Lengths differ: 0 is not 1
── 8. Failure: default config files are in search path (@test_batchtools.R#37)
dirname(conf) not equivalent to system.file("config", package = "pulsar").
Lengths differ: 0 is not 1
── 9. Failure: default config files are in search path (@test_batchtools.R#45)
length(batchtools:::findConfFile()) not equivalent to 0.
1/1 mismatches
[1] 1 - 0 == 1
── 10. Error: default config files are in search path (@test_batchtools.R#47) ─
unused argument (check.attributes = FALSE)
1: conftestbt(conf5) at testthat/test_batchtools.R:47
2: expect_equivalent(batchtools:::findConfFile(), conf) at testthat/test_batchtools.R:22
3: compare(act$val, exp$val, ..., check.attributes = FALSE)
── 11. Failure: default template files are in the search path (@test_batchtools.
basename(tmpl1) not equivalent to paste0(base, ".tmpl").
1/1 mismatches
x[1]: ".batchtools.simpletorque.tmpl"
y[1]: "simpletorque.tmpl"
── 12. Failure: default template files are in the search path (@test_batchtools.
dirname(tmpl1) not equivalent to system.file("templates", package = "pulsar").
1/1 mismatches
x[1]: "/home/hornik"
y[1]: "/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/pulsar/templat
y[1]: es"
── 13. Error: default template files are in the search path (@test_batchtools.R#
unused argument (check.attributes = FALSE)
1: templtestbt(tmpl3) at testthat/test_batchtools.R:88
2: expect_equivalent(pulsar::findTemplateFile(name), templ) at testthat/test_batchtools.R:64
3: compare(act$val, exp$val, ..., check.attributes = FALSE)
── 14. Error: batch.pulsar options (@test_batchtools.R#118) ───────────────────
unused argument (check.attributes = FALSE)
1: expect_equivalent(est$init.reg$work.dir, homedir) at testthat/test_batchtools.R:118
2: compare(act$val, exp$val, ..., check.attributes = FALSE)
══ testthat results ═══════════════════════════════════════════════════════════
OK: 146 SKIPPED: 0 FAILED: 14
1. Failure: default config files are in search path (@test_batchtools.R#34)
2. Failure: default config files are in search path (@test_batchtools.R#34)
3. Failure: default config files are in search path (@test_batchtools.R#35)
4. Failure: default config files are in search path (@test_batchtools.R#35)
5. Failure: default config files are in search path (@test_batchtools.R#36)
6. Failure: default config files are in search path (@test_batchtools.R#36)
7. Failure: default config files are in search path (@test_batchtools.R#37)
8. Failure: default config files are in search path (@test_batchtools.R#37)
9. Failure: default config files are in search path (@test_batchtools.R#45)
1. ...
Error: testthat unit tests failed
Execution halted
Flavor: r-patched-linux-x86_64
Version: 0.3.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [68s/88s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> suppressPackageStartupMessages(library(testthat))
> suppressPackageStartupMessages(library(pulsar))
>
> testthat::test_check("pulsar")
── 1. Error: default config files are in search path (@test_batchtools.R#47) ──
unused argument (check.attributes = FALSE)
1: conftestbt(conf5) at testthat/test_batchtools.R:47
2: expect_equivalent(batchtools:::findConfFile(), conf) at testthat/test_batchtools.R:22
3: compare(act$val, exp$val, ..., check.attributes = FALSE)
── 2. Error: default template files are in the search path (@test_batchtools.R#8
unused argument (check.attributes = FALSE)
1: templtestbt(tmpl3) at testthat/test_batchtools.R:88
2: expect_equivalent(pulsar::findTemplateFile(name), templ) at testthat/test_batchtools.R:64
3: compare(act$val, exp$val, ..., check.attributes = FALSE)
── 3. Error: batch.pulsar options (@test_batchtools.R#118) ────────────────────
unused argument (check.attributes = FALSE)
1: expect_equivalent(est$init.reg$work.dir, homedir) at testthat/test_batchtools.R:118
2: compare(act$val, exp$val, ..., check.attributes = FALSE)
══ testthat results ═══════════════════════════════════════════════════════════
OK: 157 SKIPPED: 0 FAILED: 3
1. Error: default config files are in search path (@test_batchtools.R#47)
2. Error: default template files are in the search path (@test_batchtools.R#88)
3. Error: batch.pulsar options (@test_batchtools.R#118)
Error: testthat unit tests failed
Execution halted
Flavor: r-release-linux-x86_64