CRAN Package Check Results for Package EBS

Last updated on 2018-06-01 08:48:53 CEST.

Check Details

Version: 3.1
Check: compiled code
Result: NOTE
    File ‘EBS/libs/EBS.so’:
     Found ‘rand’, possibly from ‘rand’ (C)
     Object: ‘GeneralFunctions.o’
    File ‘EBS/libs/EBS.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor use Fortran I/O
    nor system RNGs.
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 3.1
Check: examples
Result: ERROR
    Running examples in ‘EBS-Ex.R’ failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: EBS-package
    > ### Title: Contains funcions that run exact bayesian changepoint methods
    > ### and return changepoint probabilities and ICL criteria for model
    > ### selection
    > ### Aliases: EBS-package EBS
    > ### Keywords: changepoint segmentation exact Bayesian
    >
    > ### ** Examples
    >
    > # changes for Poisson model
    > set.seed(1)
    > x<-c(rpois(125,1),rpois(100,5),rpois(50,1),rpois(75,5),rpois(50,1))
    > out <- EBSegmentation(x,Kmax=20)
    > bic <- EBSBIC(out)
    > print(bic$NbBIC)
    [1] 7
    > icl <- EBSICL(out)
    > print(icl$NbICL)
    [1] 4
    > plot(bic$BIC,type='b',pch=1,col='blue',ylim=c(0,1000))
    > lines(icl$ICL,type='b',pch=2,col='red')
    > EBSPlotProba(out, icl$NbICL, data=TRUE, file="my-segmentation.pdf")
    >
    > # changes for Negative Binomial model, comparison of two profiles
    > set.seed(1)
    > x1<-c(rnbinom(125,size=0.2,prob=0.8),rnbinom(100,size=0.2, prob=0.1),
    + rnbinom(50,size=0.2,prob=0.6),rnbinom(75,size=0.2, prob=0.95),
    + rnbinom(50,size=0.2,prob=0.25))
    > x2<-c(rnbinom(125,size=0.15,prob=0.75),rnbinom(75,size=0.15,prob=0.2),
    + rnbinom(75,size=0.15,prob=0.9),rnbinom(125,size=0.15,prob=0.1))
    > M<-rbind(x1,x2)
    > E <- EBSProfiles(M,model=3,K=10,homoscedastic=TRUE)
    Error in while ((theta < 0) & h2 < (n/2)) { :
     the condition has length > 1
    Calls: EBSProfiles -> EBSProfiles.default
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 3.1
Check: compiled code
Result: NOTE
    File 'EBS/libs/i386/EBS.dll':
     Found 'rand', possibly from 'rand' (C)
     Object: 'GeneralFunctions.o'
    File 'EBS/libs/x64/EBS.dll':
     Found 'rand', possibly from 'rand' (C)
     Object: 'GeneralFunctions.o'
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor use Fortran I/O
    nor system RNGs.
    
    See 'Writing portable packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 3.1
Check: compiled code
Result: NOTE
    File ‘EBS/libs/EBS.so’:
     Found ‘rand’, possibly from ‘rand’ (C)
     Object: ‘GeneralFunctions.o’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor use Fortran I/O
    nor system RNGs.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavor: r-patched-solaris-x86

Version: 3.1
Check: compiled code
Result: NOTE
    File ‘EBS/libs/EBS.so’:
     Found ‘_rand’, possibly from ‘rand’ (C)
     Object: ‘GeneralFunctions.o’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor use Fortran I/O
    nor system RNGs.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavor: r-release-osx-x86_64

Version: 3.1
Check: compiled code
Result: NOTE
    File ‘EBS/libs/EBS.so’:
     Found ‘_rand’, possibly from ‘rand’ (C)
     Object: ‘GeneralFunctions.o’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor the system RNG.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavor: r-oldrel-osx-x86_64