Last updated on 2018-06-17 19:50:04 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1 | 5.14 | 45.92 | 51.06 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.1 | 3.66 | 35.43 | 39.09 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.1 | 62.92 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1 | 61.18 | NOTE | |||
| r-devel-windows-ix86+x86_64 | 1.1 | 13.00 | 57.00 | 70.00 | NOTE | |
| r-patched-linux-x86_64 | 1.1 | 4.45 | 42.77 | 47.22 | ERROR | |
| r-patched-solaris-x86 | 1.1 | 91.40 | NOTE | |||
| r-release-linux-x86_64 | 1.1 | 4.40 | 42.50 | 46.90 | ERROR | |
| r-release-windows-ix86+x86_64 | 1.1 | 12.00 | 74.00 | 86.00 | NOTE | |
| r-release-osx-x86_64 | 1.1 | NOTE | ||||
| r-oldrel-windows-ix86+x86_64 | 1.1 | 6.00 | 56.00 | 62.00 | NOTE | |
| r-oldrel-osx-x86_64 | 1.1 | NOTE |
Version: 1.1
Check: DESCRIPTION meta-information
Result: NOTE
Malformed Title field: should not end in a period.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 1.1
Check: dependencies in R code
Result: NOTE
Packages in Depends field not imported from:
‘cubature’ ‘deldir’ ‘splancs’
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 1.1
Check: S3 generic/method consistency
Result: NOTE
Found the following apparent S3 methods exported but not registered:
plot.devresid plot.gridresid plot.stpp plot.superthin plot.supresid
plot.tessdev plot.tessresid plot.thinresid print.devresid
print.gridresid print.stgrid print.stpp print.stwin print.superthin
print.supresid print.tessdev print.tessresid print.thinresid
summary.superthin summary.supresid summary.thinresid
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64
Version: 1.1
Check: R code for possible problems
Result: NOTE
bin.info : xpoints: no visible global function definition for ‘runif’
bin.info : ypoints: no visible global function definition for ‘runif’
bin.info : fun2: no visible global function definition for ‘tail’
bin.info: no visible global function definition for ‘runif’
bin.info: no visible binding for global variable ‘sd’
bin.info: no visible global function definition for ‘sd’
bin.info.MISER : fun2: no visible global function definition for ‘tail’
bin.info.MISER : int.fun: no visible global function definition for
‘sd’
bin.info.MISER: no visible global function definition for ‘runif’
bin.info.MISER : miser: no visible global function definition for
‘median’
bin.info.MISER : miser: no visible global function definition for ‘sd’
bin.info.MISER : miser: no visible global function definition for
‘runif’
bin.info.cubature : fun2: no visible global function definition for
‘tail’
bin.info.cubature : compute.fun: no visible global function definition
for ‘adaptIntegrate’
devbin.info.MISER : fun2: no visible global function definition for
‘tail’
devbin.info.MISER : int.fun: no visible global function definition for
‘sd’
devbin.info.MISER: no visible global function definition for ‘runif’
devbin.info.MISER : miser: no visible global function definition for
‘median’
devbin.info.MISER : miser: no visible global function definition for
‘sd’
devbin.info.MISER : miser: no visible global function definition for
‘runif’
devresid: no visible global function definition for ‘aggregate’
gridresid: no visible global function definition for ‘aggregate’
plot.devresid: no visible global function definition for ‘heat.colors’
plot.devresid: no visible global function definition for ‘tail’
plot.devresid: no visible global function definition for ‘layout’
plot.devresid: no visible global function definition for ‘par’
plot.devresid: no visible global function definition for ‘image’
plot.devresid: no visible global function definition for ‘points’
plot.devresid: no visible global function definition for ‘plot’
plot.devresid: no visible global function definition for ‘lines’
plot.devresid: no visible global function definition for ‘gray’
plot.devresid: no visible global function definition for ‘text’
plot.devresid: no visible global function definition for ‘quantile’
plot.devresid: no visible global function definition for ‘median’
plot.devresid: no visible global function definition for ‘mtext’
plot.gridresid: no visible global function definition for ‘heat.colors’
plot.gridresid: no visible global function definition for ‘tail’
plot.gridresid: no visible global function definition for ‘layout’
plot.gridresid: no visible global function definition for ‘par’
plot.gridresid: no visible global function definition for ‘image’
plot.gridresid: no visible global function definition for ‘points’
plot.gridresid: no visible global function definition for ‘plot’
plot.gridresid: no visible global function definition for ‘lines’
plot.gridresid: no visible global function definition for ‘gray’
plot.gridresid: no visible global function definition for ‘text’
plot.gridresid: no visible global function definition for ‘quantile’
plot.gridresid: no visible global function definition for ‘median’
plot.gridresid: no visible global function definition for ‘mtext’
plot.stpp: no visible global function definition for ‘plot’
plot.superthin: no visible global function definition for ‘plot’
plot.superthin: no visible global function definition for ‘points’
plot.supresid: no visible global function definition for ‘plot’
plot.supresid: no visible global function definition for ‘points’
plot.tessdev: no visible global function definition for ‘heat.colors’
plot.tessdev: no visible global function definition for ‘layout’
plot.tessdev: no visible global function definition for ‘par’
plot.tessdev: no visible global function definition for ‘plot’
plot.tessdev: no visible global function definition for ‘polygon’
plot.tessdev: no visible global function definition for ‘points’
plot.tessdev: no visible global function definition for ‘image’
plot.tessdev: no visible global function definition for ‘lines’
plot.tessdev: no visible global function definition for ‘gray’
plot.tessdev: no visible global function definition for ‘text’
plot.tessdev: no visible global function definition for ‘quantile’
plot.tessdev: no visible global function definition for ‘median’
plot.tessdev: no visible global function definition for ‘mtext’
plot.tessresid: no visible global function definition for ‘heat.colors’
plot.tessresid: no visible global function definition for ‘layout’
plot.tessresid: no visible global function definition for ‘par’
plot.tessresid: no visible global function definition for ‘plot’
plot.tessresid: no visible global function definition for ‘polygon’
plot.tessresid: no visible global function definition for ‘points’
plot.tessresid: no visible global function definition for ‘image’
plot.tessresid: no visible global function definition for ‘lines’
plot.tessresid: no visible global function definition for ‘gray’
plot.tessresid: no visible global function definition for ‘text’
plot.tessresid: no visible global function definition for ‘quantile’
plot.tessresid: no visible global function definition for ‘median’
plot.tessresid: no visible global function definition for ‘mtext’
plot.thinresid: no visible global function definition for ‘plot’
summary.superthin: no visible global function definition for ‘ppois’
summary.supresid: no visible global function definition for ‘ppois’
summary.thinresid: no visible global function definition for ‘ppois’
superthin: no visible global function definition for ‘rpois’
superthin: no visible global function definition for ‘runif’
superthin : fun2: no visible global function definition for ‘tail’
supresid: no visible global function definition for ‘rpois’
supresid: no visible global function definition for ‘runif’
supresid : fun2: no visible global function definition for ‘tail’
tess.info : fun2: no visible global function definition for ‘tail’
tess.info : new.points: no visible global function definition for
‘as.points’
tess.info : new.points: no visible global function definition for ‘csr’
tess.info: no visible global function definition for ‘runif’
tess.info: no visible binding for global variable ‘sd’
tess.info: no visible global function definition for ‘sd’
tess.info.MISER : fun2: no visible global function definition for
‘tail’
tess.info.MISER : int.fun: no visible global function definition for
‘as.points’
tess.info.MISER : int.fun: no visible global function definition for
‘inpip’
tess.info.MISER : int.fun: no visible global function definition for
‘sd’
tess.info.MISER: no visible global function definition for ‘runif’
tess.info.MISER : miser: no visible global function definition for
‘median’
tess.info.MISER : miser: no visible global function definition for ‘sd’
tess.info.MISER : miser: no visible global function definition for
‘runif’
tessdev: no visible global function definition for ‘deldir’
tessdev: no visible global function definition for ‘tile.list’
tessdev : sum.l: no visible global function definition for ‘as.points’
tessdev : sum.l: no visible global function definition for ‘inpip’
tessdev.info : fun2.1: no visible global function definition for ‘tail’
tessdev.info : fun2.2: no visible global function definition for ‘tail’
tessdev.info : all: no visible global function definition for
‘as.points’
tessdev.info : all: no visible global function definition for ‘inpip’
tessdev.info : all: no visible global function definition for ‘sd’
tessdev.info: no visible global function definition for ‘runif’
tessresid: no visible global function definition for ‘deldir’
tessresid: no visible global function definition for ‘tile.list’
tessresid : num: no visible global function definition for ‘as.points’
tessresid : num: no visible global function definition for ‘inpip’
thinresid: no visible global function definition for ‘runif’
Undefined global functions or variables:
adaptIntegrate aggregate as.points csr deldir gray heat.colors image
inpip layout lines median mtext par plot points polygon ppois
quantile rpois runif sd tail text tile.list
Consider adding
importFrom("grDevices", "gray", "heat.colors")
importFrom("graphics", "image", "layout", "lines", "mtext", "par",
"plot", "points", "polygon", "text")
importFrom("stats", "aggregate", "median", "ppois", "quantile",
"rpois", "runif", "sd")
importFrom("utils", "tail")
to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 1.1
Check: Rd line widths
Result: NOTE
Rd file 'gridresid.Rd':
\usage lines wider than 90 characters:
gridresid(X, cifunction, theta = NULL, lambda = NULL, grid = c(10, 10), gf = NULL, resid = c("raw", "pearson", "inverse"), algthm = c(" ... [TRUNCATED]
These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 1.1
Check: examples
Result: ERROR
Running examples in ‘stppResid-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: gridresid
> ### Title: Calculate grid-based residuals
> ### Aliases: gridresid
>
> ### ** Examples
>
> #===> load simulated data <===#
> data(simdata)
> X <- stpp(simdata$x, simdata$y, simdata$t)
stw missing - using default space-time window [0, 1]x[0, 1]
>
> #===> define two conditional intensity functions <===#
> ci1 <- function(X, theta){theta*exp(-2*X$x - 2*X$y - 2*X$t)} #correct model
>
> ci2 <- function(X, theta = NULL){rep(250, length(X$x))} #homogeneous Poisson model
>
> ## Not run:
> ##D gresiduals <- gridresid(X, ci1, theta = 3000)
> ##D plot(gresiduals)
> ## End(Not run)
> gresiduals2 <- gridresid(X, ci2)
> plot(gresiduals2)
Error in xy.coords(x, y, xlabel, ylabel, log) :
'x' is a list, but does not have components 'x' and 'y'
Calls: plot -> plot -> plot.default -> xy.coords
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64