CRAN Package Check Results for Package ProNet

Last updated on 2018-07-14 19:46:47 CEST.

Check Details

Version: 1.0.0
Check: compiled code
Result: NOTE
    File ‘ProNet/libs/ProNet.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.0.0
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Loading required package: Rcpp
    Loading required package: igraph
    
    Attaching package: ‘igraph’
    
    The following objects are masked from ‘package:stats’:
    
     decompose, spectrum
    
    The following object is masked from ‘package:base’:
    
     union
    
    Loading required package: MCL
    Loading required package: linkcomm
    Loading required package: RColorBrewer
    
    Welcome to linkcomm version 1.0-11
    
    For a step-by-step guide to using linkcomm functions:
     > vignette(topic = "linkcomm", package = "linkcomm")
    To run an interactive demo:
     > demo(topic = "linkcomm", package = "linkcomm")
    To cite, see:
     > citation("linkcomm")
    NOTE: To use linkcomm, you require read and write permissions in the current directory (see: help("getwd"), help("setwd"))
    
    Warning in graph.data.frame(input, directed = FALSE) :
     In `d' `NA' elements were replaced with string "NA"
    Warning in `[<-.factor`(`*tmp*`, thisvar, value = "NA") :
     invalid factor level, NA generated
    Warning in `[<-.factor`(`*tmp*`, thisvar, value = "NA") :
     invalid factor level, NA generated
    Warning in graph.data.frame(edgelist, directed = FALSE) :
     In `d' `NA' elements were replaced with string "NA"
    Warning in `[<-.factor`(`*tmp*`, thisvar, value = "NA") :
     invalid factor level, NA generated
    Warning in `[<-.factor`(`*tmp*`, thisvar, value = "NA") :
     invalid factor level, NA generated
    Warning in location(g3, species = c("human"), vertex.size = 3, vertex.label.cex = 0.5, :
     There are some 'NA' values in graph attribute 'category'!
    
    Error: processing vignette ‘Tutorial.Rnw’ failed with diagnostics:
     chunk 23 (label = Toplo)
    Error in if (layout %in% c("reingold.tilford", "circle", "random", "fruchterman.reingold", :
     the condition has length > 1
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.0.0
Check: re-building of vignette outputs
Result: NOTE
    Error in re-building vignettes:
     ...
     In `d' `NA' elements were replaced with string "NA"
    Warning in `[<-.factor`(`*tmp*`, thisvar, value = "NA") :
     invalid factor level, NA generated
    Warning in `[<-.factor`(`*tmp*`, thisvar, value = "NA") :
     invalid factor level, NA generated
    Warning in location(g3, species = c("human"), vertex.size = 3, vertex.label.cex = 0.5, :
     There are some 'NA' values in graph attribute 'category'!
    Warning in if (layout %in% c("reingold.tilford", "circle", "random", "fruchterman.reingold", :
     the condition has length > 1 and only the first element will be used
    Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet, :
     Running 'texi2dvi' on 'Tutorial.tex' failed.
    LaTeX errors:
    ! LaTeX Error: File `sectsty.sty' not found.
    
    Type X to quit or <RETURN> to proceed,
    or enter new name. (Default extension: sty)
    
    ! Emergency stop.
    <read *>
    
    l.7 \usepackage
     {caption}^^M
    ! ==> Fatal error occurred, no output PDF file produced!
    Calls: buildVignettes -> texi2pdf -> texi2dvi
    Execution halted
Flavor: r-oldrel-osx-x86_64