Last updated on 2018-07-20 09:49:07 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.3.4 | 69.27 | 331.50 | 400.77 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 2.3.4 | 55.44 | 292.58 | 348.02 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 2.3.4 | 527.40 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 2.3.4 | 527.26 | NOTE | |||
| r-devel-windows-ix86+x86_64 | 2.3.4 | 120.00 | 522.00 | 642.00 | NOTE | |
| r-patched-linux-x86_64 | 2.3.4 | 69.31 | 332.42 | 401.73 | NOTE | |
| r-patched-solaris-x86 | 2.3.4 | 3.70 | ERROR | |||
| r-release-linux-x86_64 | 2.3.4 | 69.07 | 327.99 | 397.06 | NOTE | |
| r-release-windows-ix86+x86_64 | 2.3.4 | 161.00 | 693.00 | 854.00 | NOTE | |
| r-release-osx-x86_64 | 2.3.4 | NOTE | ||||
| r-oldrel-windows-ix86+x86_64 | 2.3.4 | 124.00 | 298.00 | 422.00 | ERROR | |
| r-oldrel-osx-x86_64 | 2.3.4 | NOTE |
Version: 2.3.4
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘loomR’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64
Version: 2.3.4
Check: installed package size
Result: NOTE
installed size is 7.9Mb
sub-directories of 1Mb or more:
libs 6.4Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-release-osx-x86_64, r-oldrel-osx-x86_64
Version: 2.3.4
Check: package dependencies
Result: ERROR
Package required but not available: ‘hdf5r’
Packages suggested but not available for checking: ‘loomR’ ‘made4’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-patched-solaris-x86
Version: 2.3.4
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking:
‘loomR’ ‘made4’ ‘SingleCellExperiment’ ‘MAST’
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64
Version: 2.3.4
Check: loading without being on the library search path
Result: WARN
Loading required package: ggplot2
Loading required package: cowplot
Attaching package: 'cowplot'
The following object is masked from 'package:ggplot2':
ggsave
Error: package 'Matrix' 1.2.12 was found, but >= 1.2.14 is required by 'Seurat'
Execution halted
It looks like this package has a loading problem when not on .libPaths:
see the messages for details.
Flavors: r-oldrel-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64
Version: 2.3.4
Check: running examples for arch ‘i386’
Result: ERROR
Running examples in 'Seurat-Ex.R' failed
The error occurred in:
R version 3.4.4 (2018-03-15) -- "Someone to Lean On"
Copyright (C) 2018 The R Foundation for Statistical Computing
Platform: i386-w64-mingw32/i386 (32-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
Natural language support but running in an English locale
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> pkgname <- "Seurat"
> source(file.path(R.home("share"), "R", "examples-header.R"))
> options(warn = 1)
> options(pager = "console")
> library('Seurat')
Loading required package: ggplot2
Loading required package: cowplot
Attaching package: 'cowplot'
The following object is masked from 'package:ggplot2':
ggsave
Error: package 'Matrix' 1.2.12 was found, but >= 1.2.14 is required by 'Seurat'
Execution halted
Flavor: r-oldrel-windows-ix86+x86_64
Version: 2.3.4
Check: running examples for arch ‘x64’
Result: ERROR
Running examples in 'Seurat-Ex.R' failed
The error occurred in:
R version 3.4.4 (2018-03-15) -- "Someone to Lean On"
Copyright (C) 2018 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64 (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
Natural language support but running in an English locale
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> pkgname <- "Seurat"
> source(file.path(R.home("share"), "R", "examples-header.R"))
> options(warn = 1)
> options(pager = "console")
> library('Seurat')
Loading required package: ggplot2
Loading required package: cowplot
Attaching package: 'cowplot'
The following object is masked from 'package:ggplot2':
ggsave
Error: package 'Matrix' 1.2.12 was found, but >= 1.2.14 is required by 'Seurat'
Execution halted
Flavor: r-oldrel-windows-ix86+x86_64
Version: 2.3.4
Check: running tests for arch ‘i386’
Result: ERROR
Running 'testthat.R' [1s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(Seurat)
Loading required package: ggplot2
Loading required package: cowplot
Attaching package: 'cowplot'
The following object is masked from 'package:ggplot2':
ggsave
Error: package 'Matrix' 1.2.12 was found, but >= 1.2.14 is required by 'Seurat'
Execution halted
Flavor: r-oldrel-windows-ix86+x86_64
Version: 2.3.4
Check: running tests for arch ‘x64’
Result: ERROR
Running 'testthat.R' [2s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(Seurat)
Loading required package: ggplot2
Loading required package: cowplot
Attaching package: 'cowplot'
The following object is masked from 'package:ggplot2':
ggsave
Error: package 'Matrix' 1.2.12 was found, but >= 1.2.14 is required by 'Seurat'
Execution halted
Flavor: r-oldrel-windows-ix86+x86_64