Last updated on 2019-01-23 12:47:57 CET.
Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
---|---|---|---|---|---|---|
r-devel-linux-x86_64-debian-clang | 0.1.2 | 5.03 | 121.35 | 126.38 | WARN | |
r-devel-linux-x86_64-debian-gcc | 0.1.2 | 5.25 | 87.01 | 92.26 | WARN | |
r-devel-linux-x86_64-fedora-clang | 0.1.2 | 155.02 | WARN | |||
r-devel-linux-x86_64-fedora-gcc | 0.1.2 | 147.67 | WARN | |||
r-devel-windows-ix86+x86_64 | 0.1.2 | 14.00 | 152.00 | 166.00 | WARN | |
r-patched-linux-x86_64 | 0.1.2 | 6.01 | 110.84 | 116.85 | NOTE | |
r-patched-solaris-x86 | 0.1.2 | 200.40 | NOTE | |||
r-release-linux-x86_64 | 0.1.2 | 4.96 | 109.78 | 114.74 | NOTE | |
r-release-windows-ix86+x86_64 | 0.1.2 | 10.00 | 193.00 | 203.00 | NOTE | |
r-release-osx-x86_64 | 0.1.2 | NOTE | ||||
r-oldrel-windows-ix86+x86_64 | 0.1.2 | 10.00 | 192.00 | 202.00 | NOTE | |
r-oldrel-osx-x86_64 | 0.1.2 | WARN |
Version: 0.1.2
Check: R code for possible problems
Result: NOTE
plot.eb: no visible global function definition for ‘plot’
plot.eb : <anonymous>: no visible global function definition for
‘lines’
plot.ebhistorical: no visible global function definition for ‘palette’
plot.ebhistorical: no visible global function definition for ‘dev.new’
plot.ebhistorical: no visible global function definition for ‘par’
plot.ebhistorical: no visible global function definition for
‘topo.colors’
plot.ebhistorical: no visible global function definition for ‘plot’
plot.ebhistorical: no visible global function definition for ‘curve’
plot.ebhistorical: no visible global function definition for ‘lines’
plot.ebhistoricalsummary: no visible global function definition for
‘topo.colors’
plot.ebhistoricalsummary: no visible global function definition for
‘dev.new’
plot.ebhistoricalsummary: no visible global function definition for
‘plot’
plot.ebhistoricalsummary: no visible global function definition for
‘axis’
plot.ebhistoricalsummary: no visible global function definition for
‘lines’
plot.ebhistoricalsummary: no visible global function definition for
‘legend’
Undefined global functions or variables:
axis curve dev.new legend lines palette par plot topo.colors
Consider adding
importFrom("grDevices", "dev.new", "palette", "topo.colors")
importFrom("graphics", "axis", "curve", "legend", "lines", "par",
"plot")
to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 0.1.2
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
duplicated vignette title:
‘Disease Freedom with EpiBayes’
--- re-building ‘EpiBayes2Level.Rnw’ using knitr
Loading required package: survival
Package epiR 0.9-99 is loaded
Type help(epi.about) for summary information
--- finished re-building ‘EpiBayes2Level.Rnw’
--- re-building ‘EpiBayes3Level.Rnw’ using knitr
--- finished re-building ‘EpiBayes3Level.Rnw’
--- re-building ‘EpiBayesIntroduction.Rnw’ using knitr
Loading required package: survival
Package epiR 0.9-99 is loaded
Type help(epi.about) for summary information
Error in parse(text = code, keep.source = FALSE) :
<text>:2:17: unexpected symbol
1: install.packages("EpiBayes_0.0.1", type = "source", repos = NULL) # Make sure the
2: version is
^
Warning in highr::hilight(x, format, prompt = options$prompt, markup = opts$markup) :
the syntax of the source code is invalid; the fallback mode is used
--- finished re-building ‘EpiBayesIntroduction.Rnw’
Error: Duplicate vignette titles.
Ensure that the %\VignetteIndexEntry lines in the vignette sources
correspond to the vignette titles.
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 0.1.2
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
duplicated vignette title:
‘Disease Freedom with EpiBayes’
--- re-building ‘EpiBayes2Level.Rnw’ using knitr
Loading required package: survival
Package epiR 0.9-99 is loaded
Type help(epi.about) for summary information
--- finished re-building ‘EpiBayes2Level.Rnw’
--- re-building ‘EpiBayes3Level.Rnw’ using knitr
--- finished re-building ‘EpiBayes3Level.Rnw’
--- re-building ‘EpiBayesIntroduction.Rnw’ using knitr
Loading required package: survival
Package epiR 0.9-99 is loaded
Type help(epi.about) for summary information
Error in parse(text = code, keep.source = FALSE) :
<text>:2:17: unexpected symbol
1: install.packages("EpiBayes_0.0.1", type = "source", repos = NULL) # Make sure the
2: version is
^
Warning in highr::hilight(x, format, prompt = options$prompt, markup = opts$markup) :
the syntax of the source code is invalid; the fallback mode is used
--- finished re-building ‘EpiBayesIntroduction.Rnw’
Error: Duplicate vignette titles.
Ensure that the %\VignetteIndexEntry lines in the vignette sources
correspond to the vignette titles.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64
Version: 0.1.2
Check: re-building of vignette outputs
Result: WARN
Error in re-building vignettes:
...
Warning: running command 'kpsewhich framed.sty' had status 1
Warning in test_latex_pkg("framed", system.file("misc", "framed.sty", package = "knitr")) :
unable to find LaTeX package 'framed'; will use a copy from knitr
Loading required package: survival
Package epiR 0.9-79 is loaded
Type help(epi.about) for summary information
Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet, :
Running 'texi2dvi' on 'EpiBayes2Level.tex' failed.
LaTeX errors:
! LaTeX Error: File `titling.sty' not found.
Type X to quit or <RETURN> to proceed,
or enter new name. (Default extension: sty)
! Emergency stop.
<read *>
l.63 \usepackage
{datetime}^^M
! ==> Fatal error occurred, no output PDF file produced!
Calls: buildVignettes -> texi2pdf -> texi2dvi
Execution halted
Flavor: r-oldrel-osx-x86_64