CRAN Package Check Results for Package ascii

Last updated on 2019-01-26 15:47:22 CET.

Check Details

Version: 2.1
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘cacheSweave’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64

Version: 2.1
Check: whether the namespace can be loaded with stated dependencies
Result: NOTE
    Warning: no function found corresponding to methods exports from ‘ascii’ for: ‘show’
    
    A namespace must be able to be loaded with just the base namespace
    loaded: otherwise if the namespace gets loaded by a saved object, the
    session will be unable to start.
    
    Probably some imports need to be declared in the NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 2.1
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls in package code:
     ‘cacheSweave’ ‘weaver’
     Please use :: or requireNamespace() instead.
     See section 'Suggested packages' in the 'Writing R Extensions' manual.
    Package in Depends field not imported from: ‘methods’
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    ':::' call which should be '::': ‘utils:::RtangleSetup’
     See the note in ?`:::` about the use of this operator.
    Unexported objects imported by ':::' calls:
     ‘survival:::survmean’ ‘utils:::.SweaveValidFilenameRegexp’
     ‘utils:::RtangleFinish’ ‘utils:::RtangleRuncode’
     ‘utils:::SweaveParseOptions’
     See the note in ?`:::` about the use of this operator.
    Unavailable namespace imported from by a ':::' call: ‘cacheSweave’
     See the note in ?`:::` about the use of this operator.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 2.1
Check: S3 generic/method consistency
Result: NOTE
    Found the following apparent S3 methods exported but not registered:
     cbind.ascii
    See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
    manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64

Version: 2.1
Check: R code for possible problems
Result: NOTE
    Asciidoc: no visible binding for global variable ‘RweaveAsciidoc’
    Org: no visible binding for global variable ‘RweaveOrg’
    Pandoc: no visible binding for global variable ‘RweavePandoc’
    ReST: no visible binding for global variable ‘RweaveReST’
    Report: no visible global function definition for ‘new’
    T2t: no visible binding for global variable ‘RweaveT2t’
    Textile: no visible binding for global variable ‘RweaveTextile’
    ascii.coxph: no visible global function definition for ‘pchisq’
    ascii.mtable: no visible global function definition for ‘ftable’
    ascii.summary.survfit: no visible global function definition for
     ‘naprint’
    ascii.survdiff: no visible global function definition for ‘pchisq’
    ascii.survfit: no visible global function definition for ‘naprint’
    ascii.ts: no visible global function definition for ‘time’
    ascii.ts: no visible global function definition for ‘cycle’
    ascii.ts: no visible global function definition for ‘frequency’
    ascii.ts: no visible global function definition for ‘start’
    ascii.ts: no visible global function definition for ‘end’
    ascii.zoo: no visible global function definition for ‘as.ts’
    asciiCbind: no visible global function definition for ‘new’
    asciiList: no visible global function definition for ‘new’
    asciiMixed: no visible global function definition for ‘new’
    asciiTable: no visible global function definition for ‘new’
    fig: no visible global function definition for ‘jpeg’
    fig: no visible global function definition for ‘png’
    fig: no visible global function definition for ‘pdf’
    fig: no visible global function definition for ‘dev.off’
    graph: no visible global function definition for ‘jpeg’
    graph: no visible global function definition for ‘png’
    graph: no visible global function definition for ‘pdf’
    graph: no visible global function definition for ‘dev.off’
    weaverAsciiFinish: no visible global function definition for
     ‘resetStorage’
    weaverAsciiFinish: no visible binding for global variable ‘cache_expr’
    weaverAsciiRuncode: Error while checking: object ‘weaverEvalWithOpt’
     not found
    weaverAsciiSetup: no visible global function definition for ‘log_debug’
    weaverOrgSetup: no visible global function definition for ‘log_debug’
    weaverPandocSetup: no visible global function definition for
     ‘log_debug’
    weaverReSTSetup: no visible global function definition for ‘log_debug’
    weaverT2tSetup: no visible global function definition for ‘log_debug’
    weaverTextileSetup: no visible global function definition for
     ‘log_debug’
    Undefined global functions or variables:
     RweaveAsciidoc RweaveOrg RweavePandoc RweaveReST RweaveT2t
     RweaveTextile as.ts cache_expr cycle dev.off end frequency ftable
     jpeg log_debug naprint new pchisq pdf png resetStorage start time
    Consider adding
     importFrom("grDevices", "dev.off", "jpeg", "pdf", "png")
     importFrom("methods", "new")
     importFrom("stats", "as.ts", "cycle", "end", "frequency", "ftable",
     "naprint", "pchisq", "start", "time")
    to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
    contains 'methods').
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 2.1
Check: Rd line widths
Result: NOTE
    Rd file 'RweaveAsciiSetup.Rd':
     \usage lines wider than 90 characters:
     RweaveAsciiSetup(file, syntax, output = NULL, quiet = FALSE, debug = FALSE, extension = "txt", backend = "asciidoc", openSchunk = "---- ... [TRUNCATED]
    
    Rd file 'RweaveAsciidoc.Rd':
     \usage lines wider than 90 characters:
     weaverAsciiSetup(file, syntax, output = NULL, quiet = FALSE, debug = FALSE, extension = "txt", backend = "asciidoc", openSchunk = "---- ... [TRUNCATED]
    
    Rd file 'RweaveOrg.Rd':
     \usage lines wider than 90 characters:
     RweaveOrgSetup(file, syntax, output = NULL, quiet = FALSE, debug = FALSE, extension = "org", backend = "org-mode", openSchunk = "#+BEGI ... [TRUNCATED]
     weaverOrgSetup(file, syntax, output = NULL, quiet = FALSE, debug = FALSE, extension = "org", backend = "org-mode", openSchunk = "#+BEGI ... [TRUNCATED]
    
    Rd file 'RweavePandoc.Rd':
     \usage lines wider than 90 characters:
     RweavePandocSetup(file, syntax, output = NULL, quiet = FALSE, debug = FALSE, extension = "md", backend = "pandoc", openSchunk = "~~~~~~ ... [TRUNCATED]
     weaverPandocSetup(file, syntax, output = NULL, quiet = FALSE, debug = FALSE, extension = "md", backend = "pandoc", openSchunk = "~~~~~~ ... [TRUNCATED]
    
    Rd file 'RweaveReST.Rd':
     \usage lines wider than 90 characters:
     RweaveReSTSetup(file, syntax, output = NULL, quiet = FALSE, debug = FALSE, extension = "rst", backend = "docutils, sphinx, ...", openSc ... [TRUNCATED]
     weaverReSTSetup(file, syntax, output = NULL, quiet = FALSE, debug = FALSE, extension = "rst", backend = "docutils, sphinx, ...", openSc ... [TRUNCATED]
    
    Rd file 'RweaveT2t.Rd':
     \usage lines wider than 90 characters:
     RweaveT2tSetup(file, syntax, output = NULL, quiet = FALSE, debug = FALSE, extension = "t2t", backend = "txt2tags", openSchunk = "```", ... [TRUNCATED]
     weaverT2tSetup(file, syntax, output = NULL, quiet = FALSE, debug = FALSE, extension = "t2t", backend = "txt2tags", openSchunk = "```", ... [TRUNCATED]
    
    Rd file 'RweaveTextile.Rd':
     \usage lines wider than 90 characters:
     RweaveTextileSetup(file, syntax, output = NULL, quiet = FALSE, debug = FALSE, extension = "txt", backend = "textile", openSchunk = "\nb ... [TRUNCATED]
     weaverTextileSetup(file, syntax, output = NULL, quiet = FALSE, debug = FALSE, extension = "txt", backend = "textile", openSchunk = "\nb ... [TRUNCATED]
    
    Rd file 'ascii.Rd':
     \usage lines wider than 90 characters:
     ascii(x, include.rownames = TRUE, include.colnames = TRUE, rownames = NULL, colnames = NULL, format = "f", digits = 2, decimal.mark = " ... [TRUNCATED]
     ascii(x, scale = 1, print.rmean = getOption("survfit.print.rmean"), rmean = getOption("survfit.rmean"), include.rownames = TRUE, includ ... [TRUNCATED]
    
    Rd file 'asciiOpts.Rd':
     \usage lines wider than 90 characters:
     asciiOpts(select = "all", .backends = NULL, .outputs = NULL, .extensions = NULL, .cli = NULL, .args = NULL, .O = NULL, .f = NULL, .e = ... [TRUNCATED]
    
    Rd file 'cbind.ascii.Rd':
     \usage lines wider than 90 characters:
     cbind.ascii(..., caption = NULL, caption.level = NULL, frame = NULL, grid = NULL, col.width = 1, width = 0)
    
    Rd file 'convert.Rd':
     \usage lines wider than 90 characters:
     convert(i, d = NULL, f = NULL, e = NULL, O = NULL, backend = getOption("asciiBackend"), cygwin = FALSE, open = FALSE)
    
    Rd file 'createreport.Rd':
     \usage lines wider than 90 characters:
     createreport(..., list = NULL, file = NULL, format = NULL, open = TRUE, backend = getOption("asciiBackend"), encoding = NULL, options = ... [TRUNCATED]
    
    Rd file 'header.asciidoc.Rd':
     \usage lines wider than 90 characters:
     header.asciidoc(caption = NULL, caption.level = NULL, frame = NULL, grid = NULL, col.width = 1, width = 0)
    
    Rd file 'print.character.matrix.Rd':
     \usage lines wider than 90 characters:
     print.character.matrix(x, vsep = "|", before_vsep = "", after_vsep = "", hsep = "-", csep = "+", before_cell_content = " ", after_cell_ ... [TRUNCATED]
    
    Rd file 'replace.Rd':
     \usage lines wider than 90 characters:
     replace(backend = getOption("asciiBackend"), cygwin = FALSE, i, f = NULL, d = NULL, e = NULL, O = NULL)
    
    Rd file 'show.asciidoc.table.Rd':
     \usage lines wider than 90 characters:
     show.asciidoc.table(x, include.rownames = FALSE, include.colnames = FALSE, rownames = NULL, colnames = NULL, format = "f", digits = 2, ... [TRUNCATED]
    
    Rd file 'show.org.table.Rd':
     \usage lines wider than 90 characters:
     show.org.table(x, include.rownames = FALSE, include.colnames = FALSE, rownames = NULL, colnames = NULL, format = "f", digits = 2, decim ... [TRUNCATED]
    
    Rd file 'show.pandoc.table.Rd':
     \usage lines wider than 90 characters:
     show.pandoc.table(x, include.rownames = FALSE, include.colnames = FALSE, rownames = NULL, colnames = NULL, format = "f", digits = 2, de ... [TRUNCATED]
    
    Rd file 'show.rest.table.Rd':
     \usage lines wider than 90 characters:
     show.rest.table(x, include.rownames = FALSE, include.colnames = FALSE, rownames = NULL, colnames = NULL, format = "f", digits = 2, deci ... [TRUNCATED]
    
    Rd file 'show.t2t.table.Rd':
     \usage lines wider than 90 characters:
     show.t2t.table(x, include.rownames = FALSE, include.colnames = FALSE, rownames = NULL, colnames = NULL, format = "f", digits = 2, decim ... [TRUNCATED]
    
    Rd file 'show.textile.table.Rd':
     \usage lines wider than 90 characters:
     show.textile.table(x, include.rownames = FALSE, include.colnames = FALSE, rownames = NULL, colnames = NULL, format = "f", digits = 2, d ... [TRUNCATED]
    
    Rd file 'tocharac.Rd':
     \usage lines wider than 90 characters:
     tocharac(x, include.rownames = FALSE, include.colnames = FALSE, rownames = NULL, colnames = NULL, format = "f", digits = 2, decimal.mar ... [TRUNCATED]
    
    These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 2.1
Check: Rd \usage sections
Result: NOTE
    S3 methods shown with full name in documentation object 'cbind.ascii':
     ‘cbind.ascii’
    
    The \usage entries for S3 methods should use the \method markup and not
    their full name.
    See chapter ‘Writing R documentation files’ in the ‘Writing R
    Extensions’ manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64

Version: 2.1
Check: package dependencies
Result: NOTE
    Packages suggested but not available for checking: ‘cacheSweave’ ‘weaver’
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 2.1
Check: dependencies in R code
Result: NOTE
    'library' or 'require' calls in package code:
     'cacheSweave' 'weaver'
     Please use :: or requireNamespace() instead.
     See section 'Suggested packages' in the 'Writing R Extensions' manual.
    Package in Depends field not imported from: 'methods'
     These packages need to be imported from (in the NAMESPACE file)
     for when this namespace is loaded but not attached.
    ':::' call which should be '::': 'utils:::RtangleSetup'
     See the note in ?`:::` about the use of this operator.
    Unexported objects imported by ':::' calls:
     'cacheSweave:::metaChunkName' 'cacheSweave:::metaSetCreationTime'
     'survival:::survmean' 'utils:::.SweaveValidFilenameRegexp'
     'utils:::RtangleFinish' 'utils:::RtangleRuncode'
     'utils:::SweaveParseOptions'
     See the note in ?`:::` about the use of this operator.
Flavor: r-oldrel-windows-ix86+x86_64