Last updated on 2019-01-26 15:47:39 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.7 | 6.10 | 72.69 | 78.79 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 1.7 | 4.19 | 57.82 | 62.01 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 1.7 | 100.41 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 1.7 | 90.04 | NOTE | |||
| r-devel-windows-ix86+x86_64 | 1.7 | 10.00 | 109.00 | 119.00 | NOTE | |
| r-patched-linux-x86_64 | 1.7 | 6.07 | 68.95 | 75.02 | NOTE | |
| r-patched-solaris-x86 | 1.7 | 139.80 | NOTE | |||
| r-release-linux-x86_64 | 1.7 | 5.44 | 68.45 | 73.89 | NOTE | |
| r-release-windows-ix86+x86_64 | 1.7 | 14.00 | 84.00 | 98.00 | NOTE | |
| r-release-osx-x86_64 | 1.7 | NOTE | ||||
| r-oldrel-windows-ix86+x86_64 | 1.7 | 12.00 | 82.00 | 94.00 | NOTE | |
| r-oldrel-osx-x86_64 | 1.7 | WARN |
Version: 1.7
Check: dependencies in R code
Result: NOTE
'library' or 'require' calls in package code:
‘parallel’ ‘snowfall’
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 1.7
Check: S3 generic/method consistency
Result: NOTE
Found the following apparent S3 methods exported but not registered:
summary.minPtest
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64
Version: 1.7
Check: R code for possible problems
Result: NOTE
generateSNPs : sim.block: no visible global function definition for
‘rbinom’
generateSNPs : <anonymous>: no visible global function definition for
‘rbinom’
minPtest: no visible global function definition for ‘sfIsRunning’
minPtest: no visible global function definition for ‘sfInit’
minPtest: no visible global function definition for ‘sfLibrary’
minPtest: no visible global function definition for ‘sfExport’
minPtest : p_valfunc: no visible global function definition for
‘as.formula’
minPtest : p_valfunc: no visible global function definition for ‘glm’
minPtest : p_valfunc: no visible binding for global variable ‘binomial’
minPtest : perrfunc : <anonymous>: no visible global function
definition for ‘as.formula’
minPtest : perrfunc : <anonymous>: no visible global function
definition for ‘glm’
minPtest : perrfunc : <anonymous>: no visible binding for global
variable ‘binomial’
minPtest : p_valfunc: no visible global function definition for
‘pchisq’
minPtest : perrfunc : <anonymous>: no visible global function
definition for ‘pchisq’
minPtest: no visible global function definition for ‘sfClusterApplyLB’
minPtest: no visible global function definition for ‘mclapply’
minPtest: no visible global function definition for ‘sfStop’
minPtest: no visible global function definition for ‘p.adjust’
plot.minPtest: no visible global function definition for ‘plot’
plot.minPtest: no visible global function definition for ‘points’
plot.minPtest: no visible global function definition for ‘axis’
plot.minPtest: no visible global function definition for ‘box’
plot.minPtest: no visible global function definition for ‘median’
plot.minPtest: no visible global function definition for ‘par’
plot.minPtest: no visible global function definition for ‘lines’
plot.minPtest: no visible global function definition for ‘mtext’
Undefined global functions or variables:
as.formula axis binomial box glm lines mclapply median mtext p.adjust
par pchisq plot points rbinom sfClusterApplyLB sfExport sfInit
sfIsRunning sfLibrary sfStop
Consider adding
importFrom("graphics", "axis", "box", "lines", "mtext", "par", "plot",
"points")
importFrom("stats", "as.formula", "binomial", "glm", "median",
"p.adjust", "pchisq", "rbinom")
to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 1.7
Check: re-building of vignette outputs
Result: WARN
Error in re-building vignettes:
...
Error in texi2dvi(file = file, pdf = TRUE, clean = clean, quiet = quiet, :
Running 'texi2dvi' on 'vignette.tex' failed.
LaTeX errors:
! LaTeX Error: File `blindtext.sty' not found.
Type X to quit or <RETURN> to proceed,
or enter new name. (Default extension: sty)
! Emergency stop.
<read *>
l.14 \usepackage
[bf]{caption2}^^M
! ==> Fatal error occurred, no output PDF file produced!
Calls: buildVignettes -> texi2pdf -> texi2dvi
Execution halted
Flavor: r-oldrel-osx-x86_64