CRAN Package Check Results for Package VDA

Last updated on 2019-03-19 07:47:29 CET.

Additional issues

gcc-ASAN valgrind

Check Details

Version: 1.3
Check: DESCRIPTION meta-information
Result: NOTE
    Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.3
Check: R code for possible problems
Result: NOTE
    cv.vda.le.default: no visible global function definition for 'predict'
    cv.vda.r.default: no visible global function definition for 'predict'
    Undefined global functions or variables:
     predict
    Consider adding
     importFrom("stats", "predict")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 1.3
Check: compiled code
Result: NOTE
    File ‘VDA/libs/VDA.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.3
Check: examples
Result: ERROR
    Running examples in ‘VDA-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: cv.vda.le
    > ### Title: Choose the optimal pair of lambdas, lambda_1 and lambda_2
    > ### Aliases: cv.vda.le cv.vda.le.default
    >
    > ### ** Examples
    >
    > ### load zoo data
    > ### column 1 is name, columns 2:17 are features, column 18 is class
    > data(zoo)
    >
    > ### feature matrix
    > x <- zoo[,2:17]
    >
    > ### class vector
    > y <- zoo[,18]
    >
    > ### lambda vector
    > lam1 <- (1:5)/100
    > lam2 <- (1:5)/100
    >
    > ### Searching for the best pair, using both lasso and euclidean penalizations
    > cv <- cv.vda.le(x, y, kfold = 3, lam.vec.1 = exp(1:5)/10000, lam.vec.2 = (1:5)/100)
    Error in if (sumcoeff[j] != 0) { : missing value where TRUE/FALSE needed
    Calls: cv.vda.le -> cv.vda.le.default -> vda.le -> vda.le.default
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.3
Check: running examples for arch ‘i386’
Result: ERROR
    Running examples in 'VDA-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: cv.vda.le
    > ### Title: Choose the optimal pair of lambdas, lambda_1 and lambda_2
    > ### Aliases: cv.vda.le cv.vda.le.default
    >
    > ### ** Examples
    >
    > ### load zoo data
    > ### column 1 is name, columns 2:17 are features, column 18 is class
    > data(zoo)
    >
    > ### feature matrix
    > x <- zoo[,2:17]
    >
    > ### class vector
    > y <- zoo[,18]
    >
    > ### lambda vector
    > lam1 <- (1:5)/100
    > lam2 <- (1:5)/100
    >
    > ### Searching for the best pair, using both lasso and euclidean penalizations
    > cv <- cv.vda.le(x, y, kfold = 3, lam.vec.1 = exp(1:5)/10000, lam.vec.2 = (1:5)/100)
    At line 567 of file VDA.f90
    Fortran runtime error: Index '7' of dimension 2 of array 'vertex' outside of expected range (1:6)
Flavor: r-devel-windows-ix86+x86_64

Version: 1.3
Check: running examples for arch ‘x64’
Result: ERROR
    Running examples in 'VDA-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: cv.vda.le
    > ### Title: Choose the optimal pair of lambdas, lambda_1 and lambda_2
    > ### Aliases: cv.vda.le cv.vda.le.default
    >
    > ### ** Examples
    >
    > ### load zoo data
    > ### column 1 is name, columns 2:17 are features, column 18 is class
    > data(zoo)
    >
    > ### feature matrix
    > x <- zoo[,2:17]
    >
    > ### class vector
    > y <- zoo[,18]
    >
    > ### lambda vector
    > lam1 <- (1:5)/100
    > lam2 <- (1:5)/100
    >
    > ### Searching for the best pair, using both lasso and euclidean penalizations
    > cv <- cv.vda.le(x, y, kfold = 3, lam.vec.1 = exp(1:5)/10000, lam.vec.2 = (1:5)/100)
    At line 567 of file VDA.f90
    Fortran runtime error: Index '7' of dimension 2 of array 'vertex' outside of expected range (1:6)
Flavor: r-devel-windows-ix86+x86_64