Last updated on 2019-04-18 16:50:42 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.3 | 2.00 | 17.29 | 19.29 | WARN | |
| r-devel-linux-x86_64-debian-gcc | 1.1.3 | 1.79 | 14.17 | 15.96 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 1.1.3 | 23.42 | WARN | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.3 | 22.40 | NOTE | |||
| r-devel-windows-ix86+x86_64 | 1.1.3 | 7.00 | 34.00 | 41.00 | NOTE | |
| r-patched-linux-x86_64 | 1.1.3 | 1.83 | 17.28 | 19.11 | NOTE | |
| r-patched-solaris-x86 | 1.1.3 | 42.70 | ERROR | |||
| r-release-linux-x86_64 | 1.1.3 | 1.36 | 16.20 | 17.56 | NOTE | |
| r-release-windows-ix86+x86_64 | 1.1.3 | 5.00 | 32.00 | 37.00 | NOTE | |
| r-release-osx-x86_64 | 1.1.3 | WARN | ||||
| r-oldrel-windows-ix86+x86_64 | 1.1.3 | 5.00 | 27.00 | 32.00 | NOTE | |
| r-oldrel-osx-x86_64 | 1.1.3 | NOTE |
Version: 1.1.3
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
MCP_efficient.c:114:16: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
MCP_efficient.c:134:16: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
MCP_efficient.c:154:16: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-fedora-clang, r-release-osx-x86_64
Version: 1.1.3
Check: DESCRIPTION meta-information
Result: NOTE
Malformed Title field: should not end in a period.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 1.1.3
Check: R code for possible problems
Result: NOTE
SMCP : fun: no visible global function definition for 'cor'
manipulate : fun: no visible global function definition for 'sd'
sp: no visible binding for global variable 'sd'
Undefined global functions or variables:
cor sd
Consider adding
importFrom("stats", "cor", "sd")
to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 1.1.3
Check: compiled code
Result: NOTE
File ‘SMCP/libs/SMCP.so’:
Found no call to: ‘R_useDynamicSymbols’
It is good practice to register native routines and to disable symbol
search.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 1.1.3
Check: examples
Result: ERROR
Running examples in ‘SMCP-Ex.R’ failed
The error most likely occurred in:
> ### Name: SMCP
> ### Title: Smoothed minimax concave penalization (SMCP) method for
> ### genome-wide association studies.
> ### Aliases: SMCP sp
> ### Keywords: model fitting
>
> ### ** Examples
>
> x=matrix(rnorm(100*20),100,20)
> y=rnorm(100)
> fit=SMCP(x,y,0.3,0.3,3)
> #solution path for this data
> s.p=sp(x,y,0.3,10,0.05,3)
Error in SMCP(x, y, alpha, delta * i, gamma) :
NA/NaN/Inf in foreign function call (arg 6)
Calls: sp -> SMCP
Execution halted
Flavor: r-patched-solaris-x86