Last updated on 2019-04-22 07:46:37 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.2.1 | 10.30 | 305.26 | 315.56 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.2.1 | 10.54 | 229.74 | 240.28 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.2.1 | 349.40 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 1.2.1 | 370.25 | ERROR | |||
| r-devel-windows-ix86+x86_64 | 1.2.1 | 28.00 | 371.00 | 399.00 | ERROR | |
| r-patched-linux-x86_64 | 1.2.1 | 10.47 | 304.04 | 314.51 | ERROR | |
| r-patched-solaris-x86 | 1.2.1 | 526.30 | ERROR | |||
| r-release-linux-x86_64 | 1.2.1 | 8.27 | 396.06 | 404.33 | NOTE | |
| r-release-windows-ix86+x86_64 | 1.2.1 | 13.00 | 420.00 | 433.00 | NOTE | |
| r-release-osx-x86_64 | 1.2.1 | NOTE | ||||
| r-oldrel-windows-ix86+x86_64 | 1.2.1 | 18.00 | 427.00 | 445.00 | NOTE | |
| r-oldrel-osx-x86_64 | 1.2.1 | NOTE |
Version: 1.2.1
Check: DESCRIPTION meta-information
Result: NOTE
Malformed Description field: should contain one or more complete sentences.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 1.2.1
Check: R code for possible problems
Result: NOTE
initialize,D2C: warning in sort(IM, decr = TRUE, ind = TRUE): partial
argument match of 'decr' to 'decreasing'
updateD2C,D2C: warning in sort(IM, decr = TRUE, ind = TRUE): partial
argument match of 'decr' to 'decreasing'
D2C.2: no visible global function definition for 'quantile'
D2C.2: no visible global function definition for 'sd'
D2C.2: no visible global function definition for 'median'
D2C.2: no visible global function definition for 'cor'
D2C.2: no visible global function definition for 'acf'
D2C.2: no visible global function definition for 'pacf'
D2C.n: no visible global function definition for 'quantile'
H_Rn: no visible global function definition for 'runif'
H_sigmoid: no visible global function definition for 'runif'
Icond: no visible global function definition for 'cor'
PRESS: no visible global function definition for 'resid'
PRESS: no visible global function definition for 'lm.influence'
assoc: no visible global function definition for 'cor'
assoc: no visible global function definition for 'cor.test'
corDC: no visible global function definition for 'cor'
corXY: no visible global function definition for 'cor'
demo: no visible global function definition for 'rnorm'
mimr: no visible global function definition for 'var'
mimr: no visible binding for global variable 'var'
mimr: no visible global function definition for 'cor'
npred: no visible binding for global variable 'sd'
npred: no visible global function definition for 'var'
pcor1: no visible global function definition for 'cor'
ppears: no visible global function definition for 'pnorm'
quantization: no visible global function definition for 'median'
quantization: no visible global function definition for 'quantile'
rankrho: no visible global function definition for 'var'
regrlin: no visible global function definition for 'sd'
regrlin.d: no visible global function definition for 'sd'
varpred: no visible binding for global variable 'sd'
compute,DAG.network: no visible global function definition for
'numNodes'
compute,DAG.network: no visible global function definition for
'inEdges'
initialize,D2C: no visible binding for global variable 'i'
initialize,D2C: no visible global function definition for 'nodes'
initialize,D2C: no visible global function definition for 'subGraph'
initialize,D2C: no visible global function definition for 'inEdges'
initialize,D2C: no visible binding for global variable 'sd'
initialize,DAG.network : <anonymous>: no visible global function
definition for 'rnorm'
initialize,DAG.network: no visible global function definition for
'runif'
initialize,simulatedDAG: no visible binding for global variable 'i'
initialize,simulatedDAG: no visible global function definition for
'runif'
initialize,simulatedDAG: no visible global function definition for
'edges'
predict,D2C: no visible binding for global variable 'sd'
updateD2C,D2C: no visible binding for global variable 'i'
updateD2C,D2C: no visible global function definition for 'nodes'
updateD2C,D2C: no visible global function definition for 'subGraph'
updateD2C,D2C: no visible global function definition for 'inEdges'
Undefined global functions or variables:
acf cor cor.test edges i inEdges lm.influence median nodes numNodes
pacf pnorm quantile resid rnorm runif sd subGraph var
Consider adding
importFrom("stats", "acf", "cor", "cor.test", "lm.influence", "median",
"pacf", "pnorm", "quantile", "resid", "rnorm", "runif",
"sd", "var")
to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 1.2.1
Check: examples
Result: ERROR
Running examples in 'D2C-Ex.R' failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: predict,D2C-method
> ### Title: predict if there is a connection between node i and node j
> ### Aliases: predict,D2C-method
>
> ### ** Examples
>
> require(RBGL)
Loading required package: RBGL
Loading required package: graph
Loading required package: BiocGenerics
Loading required package: parallel
Attaching package: 'BiocGenerics'
The following objects are masked from 'package:parallel':
clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
clusterExport, clusterMap, parApply, parCapply, parLapply,
parLapplyLB, parRapply, parSapply, parSapplyLB
The following object is masked from 'package:randomForest':
combine
The following objects are masked from 'package:stats':
IQR, mad, sd, var, xtabs
The following objects are masked from 'package:base':
Filter, Find, Map, Position, Reduce, anyDuplicated, append,
as.data.frame, basename, cbind, colnames, dirname, do.call,
duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
tapply, union, unique, unsplit, which, which.max, which.min
> require(gRbase)
Loading required package: gRbase
> require(foreach)
Loading required package: foreach
> data(example)
> ## load the D2C object
> testDAG<-new("simulatedDAG",NDAG=1, N=50,noNodes=5,
+ functionType = "linear", seed=1,sdn=c(0.25,0.5))
simulatedDAG: DAG number: 1 generated: #nodes= 5 # edges= 0 # samples= 50
> ## creates a simulatedDAG object for testing
> plot(testDAG@list.DAGs[[1]])
Error in testDAG@list.DAGs[[1]] : subscript out of bounds
Calls: plot
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64
Version: 1.2.1
Check: examples
Result: ERROR
Running examples in ‘D2C-Ex.R’ failed
The error most likely occurred in:
> ### Name: predict,D2C-method
> ### Title: predict if there is a connection between node i and node j
> ### Aliases: predict,D2C-method
>
> ### ** Examples
>
> require(RBGL)
Loading required package: RBGL
Loading required package: graph
Loading required package: BiocGenerics
Loading required package: parallel
Attaching package: ‘BiocGenerics’
The following objects are masked from ‘package:parallel’:
clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
clusterExport, clusterMap, parApply, parCapply, parLapply,
parLapplyLB, parRapply, parSapply, parSapplyLB
The following object is masked from ‘package:randomForest’:
combine
The following objects are masked from ‘package:stats’:
IQR, mad, sd, var, xtabs
The following objects are masked from ‘package:base’:
Filter, Find, Map, Position, Reduce, anyDuplicated, append,
as.data.frame, basename, cbind, colnames, dirname, do.call,
duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
tapply, union, unique, unsplit, which, which.max, which.min
> require(gRbase)
Loading required package: gRbase
> require(foreach)
Loading required package: foreach
> data(example)
> ## load the D2C object
> testDAG<-new("simulatedDAG",NDAG=1, N=50,noNodes=5,
+ functionType = "linear", seed=1,sdn=c(0.25,0.5))
simulatedDAG: DAG number: 1 generated: #nodes= 5 # edges= 0 # samples= 50
> ## creates a simulatedDAG object for testing
> plot(testDAG@list.DAGs[[1]])
Error in testDAG@list.DAGs[[1]] : subscript out of bounds
Calls: plot
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86
Version: 1.2.1
Check: examples
Result: ERROR
Running examples in 'D2C-Ex.R' failed
The error most likely occurred in:
> ### Name: predict,D2C-method
> ### Title: predict if there is a connection between node i and node j
> ### Aliases: predict,D2C-method
>
> ### ** Examples
>
> require(RBGL)
Loading required package: RBGL
Loading required package: graph
Loading required package: BiocGenerics
Loading required package: parallel
Attaching package: 'BiocGenerics'
The following objects are masked from 'package:parallel':
clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
clusterExport, clusterMap, parApply, parCapply, parLapply,
parLapplyLB, parRapply, parSapply, parSapplyLB
The following object is masked from 'package:randomForest':
combine
The following objects are masked from 'package:stats':
IQR, mad, sd, var, xtabs
The following objects are masked from 'package:base':
Filter, Find, Map, Position, Reduce, anyDuplicated, append,
as.data.frame, basename, cbind, colMeans, colSums, colnames,
dirname, do.call, duplicated, eval, evalq, get, grep, grepl,
intersect, is.unsorted, lapply, mapply, match, mget, order, paste,
pmax, pmax.int, pmin, pmin.int, rank, rbind, rowMeans, rowSums,
rownames, sapply, setdiff, sort, table, tapply, union, unique,
unsplit, which, which.max, which.min
> require(gRbase)
Loading required package: gRbase
> require(foreach)
Loading required package: foreach
> data(example)
> ## load the D2C object
> testDAG<-new("simulatedDAG",NDAG=1, N=50,noNodes=5,
+ functionType = "linear", seed=1,sdn=c(0.25,0.5))
simulatedDAG: DAG number: 1 generated: #nodes= 5 # edges= 0 # samples= 50
> ## creates a simulatedDAG object for testing
> plot(testDAG@list.DAGs[[1]])
Error in testDAG@list.DAGs[[1]] : subscript out of bounds
Calls: plot
Execution halted
Flavor: r-devel-windows-ix86+x86_64