Last updated on 2019-04-22 07:46:47 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.2.0 | 13.17 | 197.84 | 211.01 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.2.0 | 9.43 | 147.93 | 157.36 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.2.0 | 236.20 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 0.2.0 | 245.40 | ERROR | |||
| r-devel-windows-ix86+x86_64 | 0.2.0 | 27.00 | 267.00 | 294.00 | ERROR | |
| r-patched-linux-x86_64 | 0.2.0 | 14.45 | 193.72 | 208.17 | ERROR | |
| r-patched-solaris-x86 | 0.2.0 | 319.60 | ERROR | |||
| r-release-linux-x86_64 | 0.2.0 | 10.76 | 214.55 | 225.31 | OK | |
| r-release-windows-ix86+x86_64 | 0.2.0 | 13.00 | 216.00 | 229.00 | OK | |
| r-release-osx-x86_64 | 0.2.0 | NOTE | ||||
| r-oldrel-windows-ix86+x86_64 | 0.1.1 | 21.00 | 278.00 | 299.00 | OK | |
| r-oldrel-osx-x86_64 | 0.2.0 | ERROR |
Version: 0.2.0
Check: tests
Result: ERROR
Running 'testthat.R' [94s/99s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(INDperform)
>
> test_check("INDperform")
-- 1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
round(test5$prop, 1) not equal to 0.8.
1/1 mismatches
[1] 0.7 - 0.8 == -0.1
variable required_data_type
1 edf numeric
# A tibble: 2 x 5
id ind press nr_test_timesteps NAs_in_ind_press
<int> <chr> <chr> <int> <int>
1 1 TZA Tsum 3 3
2 3 MS Tsum 3 3
variable required_data_type
1 a list
2 b factor
3 c character
[1] 1 1 1 1 1 1 1 2
[1] 2 2 4 2 2 2 2 2
-- 2. Failure: test sample_boot (@test_cond_boot.R#69) ------------------------
test1$considered[2] isn't true.
-- 3. Failure: test sample_boot (@test_cond_boot.R#70) ------------------------
all(test2$considered[c(3, 4, 6)]) isn't true.
# A tibble: 12 x 5
id ind press nr_test_timesteps NAs_in_ind_press
<int> <chr> <chr> <int> <int>
1 1 TZA Tsum 3 3
2 3 MS Tsum 3 3
3 5 rCC Tsum 3 3
4 7 Cops Tsum 3 3
5 9 Micro Tsum 3 3
6 11 rZPPP Tsum 3 3
7 13 Sprat Tsum 3 3
8 15 Herring Tsum 3 3
9 17 Stickle Tsum 3 3
10 19 Cod Tsum 3 3
11 21 SPF Tsum 3 3
12 23 LPF Tsum 3 3
# A tibble: 1 x 5
id ind press nr_test_timesteps NAs_in_ind_press
<int> <chr> <chr> <int> <int>
1 3 test_ind press 3 3
variable required_data_type
1 id integer
# A tibble: 1 x 4
id ind press error_message
<int> <chr> <chr> <chr>
1 3 test_ind press "Error in mgcv::gam(stats::as.formula(paste0(names(dat)[~
# A tibble: 1 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 44 Sprat Swin gamm arma21 "Error in lme.formula(y ~ X - 1, rando~
# A tibble: 1 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 39 rZPPP Nwin gamm arma12 "Error in lme.formula(y ~ X - 1, rando~
# A tibble: 1 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 39 rZPPP Nwin gamm arma12 "Error in lme.formula(y ~ X - 1, rando~
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
# A tibble: 1 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 1 TZA Tsum gamm arma12 "Error in lme.formula(fixed = fixed, r~
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
# A tibble: 2 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 1 TZA Tsum gamm arma11 "Error in lme.formula(fixed = fixed, r~
2 1 TZA Tsum gamm arma21 "Error in lme.formula(fixed = fixed, r~
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
# A tibble: 3 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 1 TZA Tsum gamm arma11 "Error in lme.formula(fixed = fixed, r~
2 1 TZA Tsum gamm arma12 "Error in lme.formula(fixed = fixed, r~
3 1 TZA Tsum gamm arma21 "Error in lme.formula(fixed = fixed, r~
# A tibble: 1 x 5
id ind press nr_test_timesteps NAs_in_ind_press
<int> <chr> <chr> <int> <int>
1 2 test press 3 3
variable required_data_type
1 id integer
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
# A tibble: 6 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 2 test press gamm none "Error in mgcv::gamm(formula = form, d~
2 2 test press gamm ar1 "Error in mgcv::gamm(formula = form, d~
3 2 test press gamm ar2 "Error in mgcv::gamm(formula = form, d~
4 2 test press gamm arma11 "Error in mgcv::gamm(formula = form, d~
5 2 test press gamm arma12 "Error in mgcv::gamm(formula = form, d~
6 2 test press gamm arma21 "Error in mgcv::gamm(formula = form, d~
# A tibble: 1 x 3
ind_id ind error_message
<int> <chr> <chr>
1 5 ind_na "Error in mgcv::gam(stats::as.formula(paste0(ind_name, \" ~ 1 +~
variable required_data_type
1 edf numeric
variable required_data_type
1 pred list
press press_type
1 Tsum add here
2 Swin add here
3 Pwin add here
4 Nwin add here
5 Fsprat add here
6 Fher add here
7 Fcod add here
variable required_data_type
1 edf numeric
The conditions set in the crit_scores table for sub-criterion
C9_1
are not unique, i.e. conditions are met multiple times!
Please correct your crit_score table before you continue. variable required_data_type
1 edf numeric
variable required_data_type
1 r_sq numeric
== testthat results ===========================================================
OK: 630 SKIPPED: 0 FAILED: 3
1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
2. Failure: test sample_boot (@test_cond_boot.R#69)
3. Failure: test sample_boot (@test_cond_boot.R#70)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.2.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [69s/91s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(INDperform)
>
> test_check("INDperform")
── 1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
round(test5$prop, 1) not equal to 0.8.
1/1 mismatches
[1] 0.7 - 0.8 == -0.1
variable required_data_type
1 edf numeric
# A tibble: 2 x 5
id ind press nr_test_timesteps NAs_in_ind_press
<int> <chr> <chr> <int> <int>
1 1 TZA Tsum 3 3
2 3 MS Tsum 3 3
variable required_data_type
1 a list
2 b factor
3 c character
[1] 1 1 1 1 1 1 1 2
[1] 2 2 4 2 2 2 2 2
── 2. Failure: test sample_boot (@test_cond_boot.R#69) ────────────────────────
test1$considered[2] isn't true.
── 3. Failure: test sample_boot (@test_cond_boot.R#70) ────────────────────────
all(test2$considered[c(3, 4, 6)]) isn't true.
# A tibble: 12 x 5
id ind press nr_test_timesteps NAs_in_ind_press
<int> <chr> <chr> <int> <int>
1 1 TZA Tsum 3 3
2 3 MS Tsum 3 3
3 5 rCC Tsum 3 3
4 7 Cops Tsum 3 3
5 9 Micro Tsum 3 3
6 11 rZPPP Tsum 3 3
7 13 Sprat Tsum 3 3
8 15 Herring Tsum 3 3
9 17 Stickle Tsum 3 3
10 19 Cod Tsum 3 3
11 21 SPF Tsum 3 3
12 23 LPF Tsum 3 3
# A tibble: 1 x 5
id ind press nr_test_timesteps NAs_in_ind_press
<int> <chr> <chr> <int> <int>
1 3 test_ind press 3 3
variable required_data_type
1 id integer
# A tibble: 1 x 4
id ind press error_message
<int> <chr> <chr> <chr>
1 3 test_ind press "Error in mgcv::gam(stats::as.formula(paste0(names(dat)[…
# A tibble: 1 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 44 Sprat Swin gamm arma21 "Error in lme.formula(y ~ X - 1, rando…
# A tibble: 1 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 39 rZPPP Nwin gamm arma12 "Error in lme.formula(y ~ X - 1, rando…
# A tibble: 1 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 39 rZPPP Nwin gamm arma12 "Error in lme.formula(y ~ X - 1, rando…
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
# A tibble: 1 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 1 TZA Tsum gamm arma12 "Error in lme.formula(fixed = fixed, r…
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
# A tibble: 2 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 1 TZA Tsum gamm arma11 "Error in lme.formula(fixed = fixed, r…
2 1 TZA Tsum gamm arma21 "Error in lme.formula(fixed = fixed, r…
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
# A tibble: 3 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 1 TZA Tsum gamm arma11 "Error in lme.formula(fixed = fixed, r…
2 1 TZA Tsum gamm arma12 "Error in lme.formula(fixed = fixed, r…
3 1 TZA Tsum gamm arma21 "Error in lme.formula(fixed = fixed, r…
# A tibble: 1 x 5
id ind press nr_test_timesteps NAs_in_ind_press
<int> <chr> <chr> <int> <int>
1 2 test press 3 3
variable required_data_type
1 id integer
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
# A tibble: 6 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 2 test press gamm none "Error in mgcv::gamm(formula = form, d…
2 2 test press gamm ar1 "Error in mgcv::gamm(formula = form, d…
3 2 test press gamm ar2 "Error in mgcv::gamm(formula = form, d…
4 2 test press gamm arma11 "Error in mgcv::gamm(formula = form, d…
5 2 test press gamm arma12 "Error in mgcv::gamm(formula = form, d…
6 2 test press gamm arma21 "Error in mgcv::gamm(formula = form, d…
# A tibble: 1 x 3
ind_id ind error_message
<int> <chr> <chr>
1 5 ind_na "Error in mgcv::gam(stats::as.formula(paste0(ind_name, \" ~ 1 +…
variable required_data_type
1 edf numeric
variable required_data_type
1 pred list
press press_type
1 Tsum add here
2 Swin add here
3 Pwin add here
4 Nwin add here
5 Fsprat add here
6 Fher add here
7 Fcod add here
variable required_data_type
1 edf numeric
The conditions set in the crit_scores table for sub-criterion
C9_1
are not unique, i.e. conditions are met multiple times!
Please correct your crit_score table before you continue. variable required_data_type
1 edf numeric
variable required_data_type
1 r_sq numeric
══ testthat results ═══════════════════════════════════════════════════════════
OK: 630 SKIPPED: 0 FAILED: 3
1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
2. Failure: test sample_boot (@test_cond_boot.R#69)
3. Failure: test sample_boot (@test_cond_boot.R#70)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.2.0
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from: ‘lazyeval’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64
Version: 0.2.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [104s/110s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(INDperform)
>
> test_check("INDperform")
── 1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
round(test5$prop, 1) not equal to 0.8.
1/1 mismatches
[1] 0.7 - 0.8 == -0.1
variable required_data_type
1 edf numeric
# A tibble: 2 x 5
id ind press nr_test_timesteps NAs_in_ind_press
<int> <chr> <chr> <int> <int>
1 1 TZA Tsum 3 3
2 3 MS Tsum 3 3
variable required_data_type
1 a list
2 b factor
3 c character
[1] 1 1 1 1 1 1 1 2
[1] 2 2 4 2 2 2 2 2
── 2. Failure: test sample_boot (@test_cond_boot.R#69) ────────────────────────
test1$considered[2] isn't true.
── 3. Failure: test sample_boot (@test_cond_boot.R#70) ────────────────────────
all(test2$considered[c(3, 4, 6)]) isn't true.
# A tibble: 12 x 5
id ind press nr_test_timesteps NAs_in_ind_press
<int> <chr> <chr> <int> <int>
1 1 TZA Tsum 3 3
2 3 MS Tsum 3 3
3 5 rCC Tsum 3 3
4 7 Cops Tsum 3 3
5 9 Micro Tsum 3 3
6 11 rZPPP Tsum 3 3
7 13 Sprat Tsum 3 3
8 15 Herring Tsum 3 3
9 17 Stickle Tsum 3 3
10 19 Cod Tsum 3 3
11 21 SPF Tsum 3 3
12 23 LPF Tsum 3 3
# A tibble: 1 x 5
id ind press nr_test_timesteps NAs_in_ind_press
<int> <chr> <chr> <int> <int>
1 3 test_ind press 3 3
variable required_data_type
1 id integer
# A tibble: 1 x 4
id ind press error_message
<int> <chr> <chr> <chr>
1 3 test_ind press "Error in mgcv::gam(stats::as.formula(paste0(names(dat)[…
# A tibble: 1 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 44 Sprat Swin gamm arma21 "Error in lme.formula(y ~ X - 1, rando…
# A tibble: 1 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 39 rZPPP Nwin gamm arma12 "Error in lme.formula(y ~ X - 1, rando…
# A tibble: 1 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 39 rZPPP Nwin gamm arma12 "Error in lme.formula(y ~ X - 1, rando…
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
# A tibble: 1 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 1 TZA Tsum gamm arma12 "Error in lme.formula(fixed = fixed, r…
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
# A tibble: 2 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 1 TZA Tsum gamm arma11 "Error in lme.formula(fixed = fixed, r…
2 1 TZA Tsum gamm arma21 "Error in lme.formula(fixed = fixed, r…
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
# A tibble: 3 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 1 TZA Tsum gamm arma11 "Error in lme.formula(fixed = fixed, r…
2 1 TZA Tsum gamm arma12 "Error in lme.formula(fixed = fixed, r…
3 1 TZA Tsum gamm arma21 "Error in lme.formula(fixed = fixed, r…
# A tibble: 1 x 5
id ind press nr_test_timesteps NAs_in_ind_press
<int> <chr> <chr> <int> <int>
1 2 test press 3 3
variable required_data_type
1 id integer
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
# A tibble: 6 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 2 test press gamm none "Error in mgcv::gamm(formula = form, d…
2 2 test press gamm ar1 "Error in mgcv::gamm(formula = form, d…
3 2 test press gamm ar2 "Error in mgcv::gamm(formula = form, d…
4 2 test press gamm arma11 "Error in mgcv::gamm(formula = form, d…
5 2 test press gamm arma12 "Error in mgcv::gamm(formula = form, d…
6 2 test press gamm arma21 "Error in mgcv::gamm(formula = form, d…
# A tibble: 1 x 3
ind_id ind error_message
<int> <chr> <chr>
1 5 ind_na "Error in mgcv::gam(stats::as.formula(paste0(ind_name, \" ~ 1 +…
variable required_data_type
1 edf numeric
variable required_data_type
1 pred list
press press_type
1 Tsum add here
2 Swin add here
3 Pwin add here
4 Nwin add here
5 Fsprat add here
6 Fher add here
7 Fcod add here
variable required_data_type
1 edf numeric
The conditions set in the crit_scores table for sub-criterion
C9_1
are not unique, i.e. conditions are met multiple times!
Please correct your crit_score table before you continue. variable required_data_type
1 edf numeric
variable required_data_type
1 r_sq numeric
══ testthat results ═══════════════════════════════════════════════════════════
OK: 630 SKIPPED: 0 FAILED: 3
1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
2. Failure: test sample_boot (@test_cond_boot.R#69)
3. Failure: test sample_boot (@test_cond_boot.R#70)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.2.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [110s/120s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(INDperform)
>
> test_check("INDperform")
── 1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
round(test5$prop, 1) not equal to 0.8.
1/1 mismatches
[1] 0.7 - 0.8 == -0.1
variable required_data_type
1 edf numeric
# A tibble: 2 x 5
id ind press nr_test_timesteps NAs_in_ind_press
<int> <chr> <chr> <int> <int>
1 1 TZA Tsum 3 3
2 3 MS Tsum 3 3
variable required_data_type
1 a list
2 b factor
3 c character
[1] 1 1 1 1 1 1 1 2
[1] 2 2 4 2 2 2 2 2
── 2. Failure: test sample_boot (@test_cond_boot.R#69) ────────────────────────
test1$considered[2] isn't true.
── 3. Failure: test sample_boot (@test_cond_boot.R#70) ────────────────────────
all(test2$considered[c(3, 4, 6)]) isn't true.
# A tibble: 12 x 5
id ind press nr_test_timesteps NAs_in_ind_press
<int> <chr> <chr> <int> <int>
1 1 TZA Tsum 3 3
2 3 MS Tsum 3 3
3 5 rCC Tsum 3 3
4 7 Cops Tsum 3 3
5 9 Micro Tsum 3 3
6 11 rZPPP Tsum 3 3
7 13 Sprat Tsum 3 3
8 15 Herring Tsum 3 3
9 17 Stickle Tsum 3 3
10 19 Cod Tsum 3 3
11 21 SPF Tsum 3 3
12 23 LPF Tsum 3 3
# A tibble: 1 x 5
id ind press nr_test_timesteps NAs_in_ind_press
<int> <chr> <chr> <int> <int>
1 3 test_ind press 3 3
variable required_data_type
1 id integer
# A tibble: 1 x 4
id ind press error_message
<int> <chr> <chr> <chr>
1 3 test_ind press "Error in mgcv::gam(stats::as.formula(paste0(names(dat)[…
# A tibble: 1 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 44 Sprat Swin gamm arma21 "Error in lme.formula(y ~ X - 1, rando…
# A tibble: 1 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 39 rZPPP Nwin gamm arma12 "Error in lme.formula(y ~ X - 1, rando…
# A tibble: 1 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 39 rZPPP Nwin gamm arma12 "Error in lme.formula(y ~ X - 1, rando…
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
# A tibble: 1 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 1 TZA Tsum gamm arma12 "Error in lme.formula(fixed = fixed, r…
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
# A tibble: 2 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 1 TZA Tsum gamm arma11 "Error in lme.formula(fixed = fixed, r…
2 1 TZA Tsum gamm arma21 "Error in lme.formula(fixed = fixed, r…
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
# A tibble: 3 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 1 TZA Tsum gamm arma11 "Error in lme.formula(fixed = fixed, r…
2 1 TZA Tsum gamm arma12 "Error in lme.formula(fixed = fixed, r…
3 1 TZA Tsum gamm arma21 "Error in lme.formula(fixed = fixed, r…
# A tibble: 1 x 5
id ind press nr_test_timesteps NAs_in_ind_press
<int> <chr> <chr> <int> <int>
1 2 test press 3 3
variable required_data_type
1 id integer
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
# A tibble: 6 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 2 test press gamm none "Error in mgcv::gamm(formula = form, d…
2 2 test press gamm ar1 "Error in mgcv::gamm(formula = form, d…
3 2 test press gamm ar2 "Error in mgcv::gamm(formula = form, d…
4 2 test press gamm arma11 "Error in mgcv::gamm(formula = form, d…
5 2 test press gamm arma12 "Error in mgcv::gamm(formula = form, d…
6 2 test press gamm arma21 "Error in mgcv::gamm(formula = form, d…
# A tibble: 1 x 3
ind_id ind error_message
<int> <chr> <chr>
1 5 ind_na "Error in mgcv::gam(stats::as.formula(paste0(ind_name, \" ~ 1 +…
variable required_data_type
1 edf numeric
variable required_data_type
1 pred list
press press_type
1 Tsum add here
2 Swin add here
3 Pwin add here
4 Nwin add here
5 Fsprat add here
6 Fher add here
7 Fcod add here
variable required_data_type
1 edf numeric
The conditions set in the crit_scores table for sub-criterion
C9_1
are not unique, i.e. conditions are met multiple times!
Please correct your crit_score table before you continue. variable required_data_type
1 edf numeric
variable required_data_type
1 r_sq numeric
══ testthat results ═══════════════════════════════════════════════════════════
OK: 630 SKIPPED: 0 FAILED: 3
1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
2. Failure: test sample_boot (@test_cond_boot.R#69)
3. Failure: test sample_boot (@test_cond_boot.R#70)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.2.0
Check: tests
Result: ERROR
Running 'testthat.R' [114s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(INDperform)
>
> test_check("INDperform")
-- 1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
round(test5$prop, 1) not equal to 0.8.
1/1 mismatches
[1] 0.7 - 0.8 == -0.1
variable required_data_type
1 edf numeric
# A tibble: 2 x 5
id ind press nr_test_timesteps NAs_in_ind_press
<int> <chr> <chr> <int> <int>
1 1 TZA Tsum 3 3
2 3 MS Tsum 3 3
variable required_data_type
1 a list
2 b factor
3 c character
[1] 1 1 1 1 1 1 1 2
[1] 2 2 4 2 2 2 2 2
-- 2. Failure: test sample_boot (@test_cond_boot.R#69) ------------------------
test1$considered[2] isn't true.
-- 3. Failure: test sample_boot (@test_cond_boot.R#70) ------------------------
all(test2$considered[c(3, 4, 6)]) isn't true.
# A tibble: 12 x 5
id ind press nr_test_timesteps NAs_in_ind_press
<int> <chr> <chr> <int> <int>
1 1 TZA Tsum 3 3
2 3 MS Tsum 3 3
3 5 rCC Tsum 3 3
4 7 Cops Tsum 3 3
5 9 Micro Tsum 3 3
6 11 rZPPP Tsum 3 3
7 13 Sprat Tsum 3 3
8 15 Herring Tsum 3 3
9 17 Stickle Tsum 3 3
10 19 Cod Tsum 3 3
11 21 SPF Tsum 3 3
12 23 LPF Tsum 3 3
# A tibble: 1 x 5
id ind press nr_test_timesteps NAs_in_ind_press
<int> <chr> <chr> <int> <int>
1 3 test_ind press 3 3
variable required_data_type
1 id integer
# A tibble: 1 x 4
id ind press error_message
<int> <chr> <chr> <chr>
1 3 test_ind press "Error in mgcv::gam(stats::as.formula(paste0(names(dat)[~
# A tibble: 1 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 44 Sprat Swin gamm arma21 "Error in lme.formula(y ~ X - 1, rando~
# A tibble: 1 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 39 rZPPP Nwin gamm arma12 "Error in lme.formula(y ~ X - 1, rando~
# A tibble: 1 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 39 rZPPP Nwin gamm arma12 "Error in lme.formula(y ~ X - 1, rando~
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
# A tibble: 1 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 1 TZA Tsum gamm arma12 "Error in lme.formula(fixed = fixed, r~
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
# A tibble: 2 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 1 TZA Tsum gamm arma11 "Error in lme.formula(fixed = fixed, r~
2 1 TZA Tsum gamm arma21 "Error in lme.formula(fixed = fixed, r~
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
# A tibble: 3 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 1 TZA Tsum gamm arma11 "Error in lme.formula(fixed = fixed, r~
2 1 TZA Tsum gamm arma12 "Error in lme.formula(fixed = fixed, r~
3 1 TZA Tsum gamm arma21 "Error in lme.formula(fixed = fixed, r~
# A tibble: 1 x 5
id ind press nr_test_timesteps NAs_in_ind_press
<int> <chr> <chr> <int> <int>
1 2 test press 3 3
variable required_data_type
1 id integer
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
# A tibble: 6 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 2 test press gamm none "Error in mgcv::gamm(formula = form, d~
2 2 test press gamm ar1 "Error in mgcv::gamm(formula = form, d~
3 2 test press gamm ar2 "Error in mgcv::gamm(formula = form, d~
4 2 test press gamm arma11 "Error in mgcv::gamm(formula = form, d~
5 2 test press gamm arma12 "Error in mgcv::gamm(formula = form, d~
6 2 test press gamm arma21 "Error in mgcv::gamm(formula = form, d~
# A tibble: 1 x 3
ind_id ind error_message
<int> <chr> <chr>
1 5 ind_na "Error in mgcv::gam(stats::as.formula(paste0(ind_name, \" ~ 1 +~
variable required_data_type
1 edf numeric
variable required_data_type
1 pred list
press press_type
1 Tsum add here
2 Swin add here
3 Pwin add here
4 Nwin add here
5 Fsprat add here
6 Fher add here
7 Fcod add here
variable required_data_type
1 edf numeric
The conditions set in the crit_scores table for sub-criterion
C9_1
are not unique, i.e. conditions are met multiple times!
Please correct your crit_score table before you continue. variable required_data_type
1 edf numeric
variable required_data_type
1 r_sq numeric
== testthat results ===========================================================
OK: 630 SKIPPED: 0 FAILED: 3
1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
2. Failure: test sample_boot (@test_cond_boot.R#69)
3. Failure: test sample_boot (@test_cond_boot.R#70)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-windows-ix86+x86_64
Version: 0.2.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [92s/97s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(INDperform)
>
> test_check("INDperform")
── 1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
round(test5$prop, 1) not equal to 0.8.
1/1 mismatches
[1] 0.7 - 0.8 == -0.1
variable required_data_type
1 edf numeric
# A tibble: 2 x 5
id ind press nr_test_timesteps NAs_in_ind_press
<int> <chr> <chr> <int> <int>
1 1 TZA Tsum 3 3
2 3 MS Tsum 3 3
variable required_data_type
1 a list
2 b factor
3 c character
[1] 1 1 1 1 1 1 1 2
[1] 2 2 4 2 2 2 2 2
── 2. Failure: test sample_boot (@test_cond_boot.R#69) ────────────────────────
test1$considered[2] isn't true.
── 3. Failure: test sample_boot (@test_cond_boot.R#70) ────────────────────────
all(test2$considered[c(3, 4, 6)]) isn't true.
# A tibble: 12 x 5
id ind press nr_test_timesteps NAs_in_ind_press
<int> <chr> <chr> <int> <int>
1 1 TZA Tsum 3 3
2 3 MS Tsum 3 3
3 5 rCC Tsum 3 3
4 7 Cops Tsum 3 3
5 9 Micro Tsum 3 3
6 11 rZPPP Tsum 3 3
7 13 Sprat Tsum 3 3
8 15 Herring Tsum 3 3
9 17 Stickle Tsum 3 3
10 19 Cod Tsum 3 3
11 21 SPF Tsum 3 3
12 23 LPF Tsum 3 3
# A tibble: 1 x 5
id ind press nr_test_timesteps NAs_in_ind_press
<int> <chr> <chr> <int> <int>
1 3 test_ind press 3 3
variable required_data_type
1 id integer
# A tibble: 1 x 4
id ind press error_message
<int> <chr> <chr> <chr>
1 3 test_ind press "Error in mgcv::gam(stats::as.formula(paste0(names(dat)[…
# A tibble: 1 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 44 Sprat Swin gamm arma21 "Error in lme.formula(y ~ X - 1, rando…
# A tibble: 1 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 39 rZPPP Nwin gamm arma12 "Error in lme.formula(y ~ X - 1, rando…
# A tibble: 1 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 39 rZPPP Nwin gamm arma12 "Error in lme.formula(y ~ X - 1, rando…
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
# A tibble: 1 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 1 TZA Tsum gamm arma12 "Error in lme.formula(fixed = fixed, r…
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
# A tibble: 2 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 1 TZA Tsum gamm arma11 "Error in lme.formula(fixed = fixed, r…
2 1 TZA Tsum gamm arma21 "Error in lme.formula(fixed = fixed, r…
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
# A tibble: 3 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 1 TZA Tsum gamm arma11 "Error in lme.formula(fixed = fixed, r…
2 1 TZA Tsum gamm arma12 "Error in lme.formula(fixed = fixed, r…
3 1 TZA Tsum gamm arma21 "Error in lme.formula(fixed = fixed, r…
# A tibble: 1 x 5
id ind press nr_test_timesteps NAs_in_ind_press
<int> <chr> <chr> <int> <int>
1 2 test press 3 3
variable required_data_type
1 id integer
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
# A tibble: 6 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 2 test press gamm none "Error in mgcv::gamm(formula = form, d…
2 2 test press gamm ar1 "Error in mgcv::gamm(formula = form, d…
3 2 test press gamm ar2 "Error in mgcv::gamm(formula = form, d…
4 2 test press gamm arma11 "Error in mgcv::gamm(formula = form, d…
5 2 test press gamm arma12 "Error in mgcv::gamm(formula = form, d…
6 2 test press gamm arma21 "Error in mgcv::gamm(formula = form, d…
# A tibble: 1 x 3
ind_id ind error_message
<int> <chr> <chr>
1 5 ind_na "Error in mgcv::gam(stats::as.formula(paste0(ind_name, \" ~ 1 +…
variable required_data_type
1 edf numeric
variable required_data_type
1 pred list
press press_type
1 Tsum add here
2 Swin add here
3 Pwin add here
4 Nwin add here
5 Fsprat add here
6 Fher add here
7 Fcod add here
variable required_data_type
1 edf numeric
The conditions set in the crit_scores table for sub-criterion
C9_1
are not unique, i.e. conditions are met multiple times!
Please correct your crit_score table before you continue. variable required_data_type
1 edf numeric
variable required_data_type
1 r_sq numeric
══ testthat results ═══════════════════════════════════════════════════════════
OK: 630 SKIPPED: 0 FAILED: 3
1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
2. Failure: test sample_boot (@test_cond_boot.R#69)
3. Failure: test sample_boot (@test_cond_boot.R#70)
Error: testthat unit tests failed
Execution halted
Flavor: r-patched-linux-x86_64
Version: 0.2.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [135s/167s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(INDperform)
>
> test_check("INDperform")
── 1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
round(test5$prop, 1) not equal to 0.8.
1/1 mismatches
[1] 0.7 - 0.8 == -0.1
variable required_data_type
1 edf numeric
# A tibble: 2 x 5
id ind press nr_test_timesteps NAs_in_ind_press
<int> <chr> <chr> <int> <int>
1 1 TZA Tsum 3 3
2 3 MS Tsum 3 3
variable required_data_type
1 a list
2 b factor
3 c character
[1] 1 1 1 1 1 1 1 2
[1] 2 2 4 2 2 2 2 2
── 2. Failure: test sample_boot (@test_cond_boot.R#69) ────────────────────────
test1$considered[2] isn't true.
── 3. Failure: test sample_boot (@test_cond_boot.R#70) ────────────────────────
all(test2$considered[c(3, 4, 6)]) isn't true.
# A tibble: 12 x 5
id ind press nr_test_timesteps NAs_in_ind_press
<int> <chr> <chr> <int> <int>
1 1 TZA Tsum 3 3
2 3 MS Tsum 3 3
3 5 rCC Tsum 3 3
4 7 Cops Tsum 3 3
5 9 Micro Tsum 3 3
6 11 rZPPP Tsum 3 3
7 13 Sprat Tsum 3 3
8 15 Herring Tsum 3 3
9 17 Stickle Tsum 3 3
10 19 Cod Tsum 3 3
11 21 SPF Tsum 3 3
12 23 LPF Tsum 3 3
# A tibble: 1 x 5
id ind press nr_test_timesteps NAs_in_ind_press
<int> <chr> <chr> <int> <int>
1 3 test_ind press 3 3
variable required_data_type
1 id integer
# A tibble: 1 x 4
id ind press error_message
<int> <chr> <chr> <chr>
1 3 test_ind press "Error in mgcv::gam(stats::as.formula(paste0(names(dat)[…
# A tibble: 1 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 44 Sprat Swin gamm arma21 "Error in lme.formula(y ~ X - 1, rando…
# A tibble: 1 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 39 rZPPP Nwin gamm arma12 "Error in lme.formula(y ~ X - 1, rando…
# A tibble: 1 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 39 rZPPP Nwin gamm arma12 "Error in lme.formula(y ~ X - 1, rando…
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
# A tibble: 1 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 1 TZA Tsum gamm arma12 "Error in lme.formula(fixed = fixed, r…
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
# A tibble: 2 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 1 TZA Tsum gamm arma11 "Error in lme.formula(fixed = fixed, r…
2 1 TZA Tsum gamm arma21 "Error in lme.formula(fixed = fixed, r…
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
# A tibble: 3 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 1 TZA Tsum gamm arma11 "Error in lme.formula(fixed = fixed, r…
2 1 TZA Tsum gamm arma12 "Error in lme.formula(fixed = fixed, r…
3 1 TZA Tsum gamm arma21 "Error in lme.formula(fixed = fixed, r…
# A tibble: 1 x 5
id ind press nr_test_timesteps NAs_in_ind_press
<int> <chr> <chr> <int> <int>
1 2 test press 3 3
variable required_data_type
1 id integer
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
Maximum number of PQL iterations: 20
# A tibble: 6 x 6
id ind press model_type corrstruc error_message
<int> <chr> <chr> <chr> <chr> <chr>
1 2 test press gamm none "Error in mgcv::gamm(formula = form, d…
2 2 test press gamm ar1 "Error in mgcv::gamm(formula = form, d…
3 2 test press gamm ar2 "Error in mgcv::gamm(formula = form, d…
4 2 test press gamm arma11 "Error in mgcv::gamm(formula = form, d…
5 2 test press gamm arma12 "Error in mgcv::gamm(formula = form, d…
6 2 test press gamm arma21 "Error in mgcv::gamm(formula = form, d…
# A tibble: 1 x 3
ind_id ind error_message
<int> <chr> <chr>
1 5 ind_na "Error in mgcv::gam(stats::as.formula(paste0(ind_name, \" ~ 1 +…
variable required_data_type
1 edf numeric
variable required_data_type
1 pred list
press press_type
1 Tsum add here
2 Swin add here
3 Pwin add here
4 Nwin add here
5 Fsprat add here
6 Fher add here
7 Fcod add here
variable required_data_type
1 edf numeric
The conditions set in the crit_scores table for sub-criterion
C9_1
are not unique, i.e. conditions are met multiple times!
Please correct your crit_score table before you continue. variable required_data_type
1 edf numeric
variable required_data_type
1 r_sq numeric
══ testthat results ═══════════════════════════════════════════════════════════
OK: 630 SKIPPED: 0 FAILED: 3
1. Failure: check gams under different distributions (@test_calc_deriv.R#82)
2. Failure: test sample_boot (@test_cond_boot.R#69)
3. Failure: test sample_boot (@test_cond_boot.R#70)
Error: testthat unit tests failed
Execution halted
Flavor: r-patched-solaris-x86
Version: 0.2.0
Check: package dependencies
Result: ERROR
Package required and available but unsuitable version: ‘grDevices’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-oldrel-osx-x86_64