CRAN Package Check Results for Package liayson

Last updated on 2019-04-22 07:46:49 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.1 18.43 196.27 214.70 ERROR
r-devel-linux-x86_64-debian-gcc 1.0.1 17.36 152.52 169.88 ERROR
r-devel-linux-x86_64-fedora-clang 1.0.1 259.38 ERROR
r-devel-linux-x86_64-fedora-gcc 1.0.1 252.57 ERROR
r-devel-windows-ix86+x86_64 1.0.1 48.00 203.00 251.00 ERROR
r-patched-linux-x86_64 1.0.1 19.25 194.74 213.99 ERROR
r-patched-solaris-x86 1.0.1 371.90 ERROR
r-release-linux-x86_64 1.0.1 13.14 194.03 207.17 OK
r-release-windows-ix86+x86_64 1.0.1 23.00 367.00 390.00 OK
r-release-osx-x86_64 1.0.1 OK
r-oldrel-windows-ix86+x86_64 1.0.1 18.00 320.00 338.00 OK
r-oldrel-osx-x86_64 1.0.1 OK

Check Details

Version: 1.0.1
Check: examples
Result: ERROR
    Running examples in 'liayson-Ex.R' failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: clusterCells
    > ### Title: Grouping cells into clones.
    > ### Aliases: clusterCells
    >
    > ### ** Examples
    >
    > data(cnps)
    > set.seed(2)
    > rcells = sample(colnames(cnps), 120)
    > outc = clusterCells(cnps[apply(cnps, 1, var)>0, rcells])
    [1] "Neither k nor h is set."
    [1] "Using Akaike information criterion to decide number of clusters..."
    Error in kmeans(t(cnps), centers = x) :
     more cluster centers than distinct data points.
    Calls: clusterCells ... sapply -> lapply -> FUN -> .kmeansAIC -> ncol -> kmeans
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64

Version: 1.0.1
Check: examples
Result: ERROR
    Running examples in ‘liayson-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: clusterCells
    > ### Title: Grouping cells into clones.
    > ### Aliases: clusterCells
    >
    > ### ** Examples
    >
    > data(cnps)
    > set.seed(2)
    > rcells = sample(colnames(cnps), 120)
    > outc = clusterCells(cnps[apply(cnps, 1, var)>0, rcells])
    [1] "Neither k nor h is set."
    [1] "Using Akaike information criterion to decide number of clusters..."
    Error in kmeans(t(cnps), centers = x) :
     more cluster centers than distinct data points.
    Calls: clusterCells ... sapply -> lapply -> FUN -> .kmeansAIC -> ncol -> kmeans
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-solaris-x86

Version: 1.0.1
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘liayson.Rnw’ using Sweave
    
    Error: processing vignette 'liayson.Rnw' failed with diagnostics:
     chunk 1
    Error : Please install xml2 package
    
    --- failed re-building ‘liayson.Rnw’
    
    SUMMARY: processing the following file failed:
     ‘liayson.Rnw’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86