Last updated on 2019-05-19 15:47:48 CEST.
Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
---|---|---|---|---|---|---|
r-devel-linux-x86_64-debian-clang | 0.8.0 | 18.94 | 163.90 | 182.84 | ERROR | |
r-devel-linux-x86_64-debian-gcc | 0.8.0 | 16.27 | 131.81 | 148.08 | ERROR | |
r-devel-linux-x86_64-fedora-clang | 0.8.0 | 219.17 | ERROR | |||
r-devel-linux-x86_64-fedora-gcc | 0.8.0 | 217.07 | ERROR | |||
r-devel-windows-ix86+x86_64 | 0.8.0 | 56.00 | 258.00 | 314.00 | ERROR | |
r-patched-linux-x86_64 | 0.8.0 | 20.23 | 164.89 | 185.12 | ERROR | |
r-patched-solaris-x86 | 0.8.0 | 332.30 | ERROR | |||
r-release-linux-x86_64 | 0.8.0 | 18.70 | 164.03 | 182.73 | ERROR | |
r-release-windows-ix86+x86_64 | 0.8.0 | 65.00 | 270.00 | 335.00 | ERROR | |
r-release-osx-x86_64 | 0.8.0 | ERROR | ||||
r-oldrel-windows-ix86+x86_64 | 0.8.0 | 33.00 | 239.00 | 272.00 | ERROR | |
r-oldrel-osx-x86_64 | 0.8.0 | OK |
Version: 0.8.0
Check: tests
Result: ERROR
Running 'testthat.R' [7s/15s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(biomartr)
>
> test_check("biomartr")
-- 1. Error: The getENSEMBLGENOMESInfo() interface works properly.. (@test-getEN
The API 'http://rest.ensemblgenomes.org' does not
seem to work properly. Are you connected to the internet?
Is the homepage 'http://rest.ensemblgenomes.org'
currently available?
1: getENSEMBLGENOMESInfo() at testthat/test-getENSEMBLGENOMESInfo.R:6
2: get.ensemblgenome.info(update = TRUE)
3: stop("The API 'http://rest.ensemblgenomes.org' does not \n seem to work properly. Are you connected to the internet? \n Is the homepage 'http://rest.ensemblgenomes.org' \n currently available?",
call. = FALSE)
trying URL 'ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/metagenomes/assembly_summary.txt'
Content type 'unknown' length 2972019 bytes (2.8 MB)
==================================================
== testthat results ===========================================================
OK: 2 SKIPPED: 105 WARNINGS: 0 FAILED: 1
1. Error: The getENSEMBLGENOMESInfo() interface works properly.. (@test-getENSEMBLGENOMESInfo.R#6)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.8.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [6s/15s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(biomartr)
>
> test_check("biomartr")
── 1. Error: The getENSEMBLGENOMESInfo() interface works properly.. (@test-getEN
The API 'http://rest.ensemblgenomes.org' does not
seem to work properly. Are you connected to the internet?
Is the homepage 'http://rest.ensemblgenomes.org'
currently available?
1: getENSEMBLGENOMESInfo() at testthat/test-getENSEMBLGENOMESInfo.R:6
2: get.ensemblgenome.info(update = TRUE)
3: stop("The API 'http://rest.ensemblgenomes.org' does not \n seem to work properly. Are you connected to the internet? \n Is the homepage 'http://rest.ensemblgenomes.org' \n currently available?",
call. = FALSE)
trying URL 'ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/metagenomes/assembly_summary.txt'
Content type 'unknown' length 2972019 bytes (2.8 MB)
==================================================
══ testthat results ═══════════════════════════════════════════════════════════
OK: 2 SKIPPED: 105 WARNINGS: 0 FAILED: 1
1. Error: The getENSEMBLGENOMESInfo() interface works properly.. (@test-getENSEMBLGENOMESInfo.R#6)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.8.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [8s/14s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(biomartr)
>
> test_check("biomartr")
── 1. Error: The getENSEMBLGENOMESInfo() interface works properly.. (@test-getEN
The API 'http://rest.ensemblgenomes.org' does not
seem to work properly. Are you connected to the internet?
Is the homepage 'http://rest.ensemblgenomes.org'
currently available?
1: getENSEMBLGENOMESInfo() at testthat/test-getENSEMBLGENOMESInfo.R:6
2: get.ensemblgenome.info(update = TRUE)
3: stop("The API 'http://rest.ensemblgenomes.org' does not \n seem to work properly. Are you connected to the internet? \n Is the homepage 'http://rest.ensemblgenomes.org' \n currently available?",
call. = FALSE)
trying URL 'ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/metagenomes/assembly_summary.txt'
Content type 'unknown' length 2972019 bytes (2.8 MB)
==================================================
══ testthat results ═══════════════════════════════════════════════════════════
OK: 2 SKIPPED: 105 WARNINGS: 0 FAILED: 1
1. Error: The getENSEMBLGENOMESInfo() interface works properly.. (@test-getENSEMBLGENOMESInfo.R#6)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.8.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [8s/22s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(biomartr)
>
> test_check("biomartr")
── 1. Error: The getENSEMBLGENOMESInfo() interface works properly.. (@test-getEN
The API 'http://rest.ensemblgenomes.org' does not
seem to work properly. Are you connected to the internet?
Is the homepage 'http://rest.ensemblgenomes.org'
currently available?
1: getENSEMBLGENOMESInfo() at testthat/test-getENSEMBLGENOMESInfo.R:6
2: get.ensemblgenome.info(update = TRUE)
3: stop("The API 'http://rest.ensemblgenomes.org' does not \n seem to work properly. Are you connected to the internet? \n Is the homepage 'http://rest.ensemblgenomes.org' \n currently available?",
call. = FALSE)
trying URL 'ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/metagenomes/assembly_summary.txt'
Content type 'unknown' length 2971384 bytes (2.8 MB)
==================================================
══ testthat results ═══════════════════════════════════════════════════════════
OK: 2 SKIPPED: 105 WARNINGS: 0 FAILED: 1
1. Error: The getENSEMBLGENOMESInfo() interface works properly.. (@test-getENSEMBLGENOMESInfo.R#6)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.8.0
Check: tests
Result: ERROR
Running 'testthat.R' [14s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(biomartr)
>
> test_check("biomartr")
-- 1. Error: The getENSEMBLGENOMESInfo() interface works properly.. (@test-getEN
The API 'http://rest.ensemblgenomes.org' does not
seem to work properly. Are you connected to the internet?
Is the homepage 'http://rest.ensemblgenomes.org'
currently available?
1: getENSEMBLGENOMESInfo() at testthat/test-getENSEMBLGENOMESInfo.R:6
2: get.ensemblgenome.info(update = TRUE)
3: stop("The API 'http://rest.ensemblgenomes.org' does not \n seem to work properly. Are you connected to the internet? \n Is the homepage 'http://rest.ensemblgenomes.org' \n currently available?",
call. = FALSE)
trying URL 'ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/metagenomes/assembly_summary.txt'
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.
downloaded 2.8 MB
== testthat results ===========================================================
OK: 2 SKIPPED: 105 WARNINGS: 0 FAILED: 1
1. Error: The getENSEMBLGENOMESInfo() interface works properly.. (@test-getENSEMBLGENOMESInfo.R#6)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-windows-ix86+x86_64
Version: 0.8.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [7s/22s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(biomartr)
>
> test_check("biomartr")
── 1. Error: The getENSEMBLGENOMESInfo() interface works properly.. (@test-getEN
The API 'http://rest.ensemblgenomes.org' does not
seem to work properly. Are you connected to the internet?
Is the homepage 'http://rest.ensemblgenomes.org'
currently available?
1: getENSEMBLGENOMESInfo() at testthat/test-getENSEMBLGENOMESInfo.R:6
2: get.ensemblgenome.info(update = TRUE)
3: stop("The API 'http://rest.ensemblgenomes.org' does not \n seem to work properly. Are you connected to the internet? \n Is the homepage 'http://rest.ensemblgenomes.org' \n currently available?",
call. = FALSE)
trying URL 'ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/metagenomes/assembly_summary.txt'
Content type 'unknown' length 2972019 bytes (2.8 MB)
==================================================
══ testthat results ═══════════════════════════════════════════════════════════
OK: 2 SKIPPED: 105 WARNINGS: 0 FAILED: 1
1. Error: The getENSEMBLGENOMESInfo() interface works properly.. (@test-getENSEMBLGENOMESInfo.R#6)
Error: testthat unit tests failed
Execution halted
Flavor: r-patched-linux-x86_64
Version: 0.8.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [13s/54s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(biomartr)
>
> test_check("biomartr")
── 1. Error: The getENSEMBLGENOMESInfo() interface works properly.. (@test-getEN
The API 'http://rest.ensemblgenomes.org' does not
seem to work properly. Are you connected to the internet?
Is the homepage 'http://rest.ensemblgenomes.org'
currently available?
1: getENSEMBLGENOMESInfo() at testthat/test-getENSEMBLGENOMESInfo.R:6
2: get.ensemblgenome.info(update = TRUE)
3: stop("The API 'http://rest.ensemblgenomes.org' does not \n seem to work properly. Are you connected to the internet? \n Is the homepage 'http://rest.ensemblgenomes.org' \n currently available?",
call. = FALSE)
trying URL 'ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/metagenomes/assembly_summary.txt'
Content type 'unknown' length 2971384 bytes (2.8 MB)
==================================================
══ testthat results ═══════════════════════════════════════════════════════════
OK: 2 SKIPPED: 105 WARNINGS: 0 FAILED: 1
1. Error: The getENSEMBLGENOMESInfo() interface works properly.. (@test-getENSEMBLGENOMESInfo.R#6)
Error: testthat unit tests failed
Execution halted
Flavor: r-patched-solaris-x86
Version: 0.8.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [7s/14s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(biomartr)
>
> test_check("biomartr")
── 1. Error: The getENSEMBLGENOMESInfo() interface works properly.. (@test-getEN
The API 'http://rest.ensemblgenomes.org' does not
seem to work properly. Are you connected to the internet?
Is the homepage 'http://rest.ensemblgenomes.org'
currently available?
1: getENSEMBLGENOMESInfo() at testthat/test-getENSEMBLGENOMESInfo.R:6
2: get.ensemblgenome.info(update = TRUE)
3: stop("The API 'http://rest.ensemblgenomes.org' does not \n seem to work properly. Are you connected to the internet? \n Is the homepage 'http://rest.ensemblgenomes.org' \n currently available?",
call. = FALSE)
trying URL 'ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/metagenomes/assembly_summary.txt'
Content type 'unknown' length 2972019 bytes (2.8 MB)
==================================================
══ testthat results ═══════════════════════════════════════════════════════════
OK: 2 SKIPPED: 105 WARNINGS: 0 FAILED: 1
1. Error: The getENSEMBLGENOMESInfo() interface works properly.. (@test-getENSEMBLGENOMESInfo.R#6)
Error: testthat unit tests failed
Execution halted
Flavor: r-release-linux-x86_64
Version: 0.8.0
Check: tests
Result: ERROR
Running 'testthat.R' [26s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(biomartr)
>
> test_check("biomartr")
-- 1. Error: The getENSEMBLGENOMESInfo() interface works properly.. (@test-getEN
The API 'http://rest.ensemblgenomes.org' does not
seem to work properly. Are you connected to the internet?
Is the homepage 'http://rest.ensemblgenomes.org'
currently available?
1: getENSEMBLGENOMESInfo() at testthat/test-getENSEMBLGENOMESInfo.R:6
2: get.ensemblgenome.info(update = TRUE)
3: stop("The API 'http://rest.ensemblgenomes.org' does not \n seem to work properly. Are you connected to the internet? \n Is the homepage 'http://rest.ensemblgenomes.org' \n currently available?",
call. = FALSE)
trying URL 'ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/metagenomes/assembly_summary.txt'
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
..
downloaded 2.8 MB
== testthat results ===========================================================
OK: 2 SKIPPED: 105 WARNINGS: 0 FAILED: 1
1. Error: The getENSEMBLGENOMESInfo() interface works properly.. (@test-getENSEMBLGENOMESInfo.R#6)
Error: testthat unit tests failed
Execution halted
Flavor: r-release-windows-ix86+x86_64
Version: 0.8.0
Check: package dependencies
Result: ERROR
Packages required but not available: 'biomaRt', 'Biostrings'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-release-osx-x86_64
Version: 0.8.0
Check: tests
Result: ERROR
Running 'testthat.R' [18s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(biomartr)
>
> test_check("biomartr")
-- 1. Error: The getENSEMBLGENOMESInfo() interface works properly.. (@test-getEN
The API 'http://rest.ensemblgenomes.org' does not
seem to work properly. Are you connected to the internet?
Is the homepage 'http://rest.ensemblgenomes.org'
currently available?
1: getENSEMBLGENOMESInfo() at testthat/test-getENSEMBLGENOMESInfo.R:6
2: get.ensemblgenome.info(update = TRUE)
3: stop("The API 'http://rest.ensemblgenomes.org' does not \n seem to work properly. Are you connected to the internet? \n Is the homepage 'http://rest.ensemblgenomes.org' \n currently available?",
call. = FALSE)
trying URL 'ftp://ftp.ncbi.nlm.nih.gov/genomes/genbank/metagenomes/assembly_summary.txt'
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.......... .......... .......... .......... ..........
.
downloaded 2.8 MB
== testthat results ===========================================================
OK: 2 SKIPPED: 105 WARNINGS: 0 FAILED: 1
1. Error: The getENSEMBLGENOMESInfo() interface works properly.. (@test-getENSEMBLGENOMESInfo.R#6)
Error: testthat unit tests failed
Execution halted
Flavor: r-oldrel-windows-ix86+x86_64