CRAN Package Check Results for Package mssm

Last updated on 2019-08-02 08:51:48 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.1.1 295.20 59.03 354.23 OK
r-devel-linux-x86_64-debian-gcc 0.1.1 249.10 45.90 295.00 OK
r-devel-linux-x86_64-fedora-clang 0.1.1 550.94 ERROR
r-devel-linux-x86_64-fedora-gcc 0.1.1 570.99 ERROR
r-devel-windows-ix86+x86_64 0.1.1 856.00 228.00 1084.00 NOTE
r-patched-linux-x86_64 0.1.1 275.94 59.00 334.94 OK
r-patched-solaris-x86 0.1.1 442.90 OK
r-release-linux-x86_64 0.1.1 276.00 59.56 335.56 OK
r-release-windows-ix86+x86_64 0.1.1 865.00 220.00 1085.00 NOTE
r-release-osx-x86_64 0.1.1 NOTE
r-oldrel-windows-ix86+x86_64 0.1.1 610.00 216.00 826.00 NOTE
r-oldrel-osx-x86_64 0.1.1 NOTE

Additional issues

LTO OpenBLAS

Check Details

Version: 0.1.1
Check: installed package size
Result: NOTE
     installed size is 16.6Mb
     sub-directories of 1Mb or more:
     help 1.0Mb
     libs 15.5Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64

Version: 0.1.1
Check: tests
Result: ERROR
     Running ‘testthat.R’ [17s/18s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(mssm)
     >
     > test_check("mssm", reporter = "summary")
     C++: .
     Test versus old results for kernel methods: .......
     Test versus old results for 'mssm' methods: .............................S......................S......................S......................S......................S......................S......................S...1.2.....3....4..5.6S......................S..
     Testing manual page results: SS...S..S
     Testing miscellaneous functions: .
     Testing sample methods: ....
    
     ══ Skipped ═════════════════════════════════════════════════════════════════════
     1. get the same with 'poisson_log' (@test-gets-old-mssm.R#213) - Reason: On CRAN
    
     2. get the same with 'poisson_sqrt' (@test-gets-old-mssm.R#225) - Reason: On CRAN
    
     3. get the same with 'binomial_logit' (@test-gets-old-mssm.R#236) - Reason: On CRAN
    
     4. get the same with 'binomial_cloglog' (@test-gets-old-mssm.R#248) - Reason: On CRAN
    
     5. get the same with 'binomial_probit' (@test-gets-old-mssm.R#261) - Reason: On CRAN
    
     6. get the same with 'Gamma_log' (@test-gets-old-mssm.R#273) - Reason: On CRAN
    
     7. get the same with 'gaussian_identity' (@test-gets-old-mssm.R#283) - Reason: On CRAN
    
     8. get the same with 'gaussian_log' (@test-gets-old-mssm.R#294) - Reason: On CRAN
    
     9. get the same with 'gaussian_inverse' (@test-gets-old-mssm.R#306) - Reason: On CRAN
    
     10. manual page for 'mssm' yields the same output (@test-man-pages.R#6) - Reason: On CRAN
    
     11. manual page for 'mssm' yields the same output (@test-man-pages.R#6) - Reason: On CRAN
    
     12. manual page for 'plot.mssm' yields the same output (@test-man-pages.R#62) - Reason: On CRAN
    
     13. manual page for 'get_ess.mssm' and `plot.mssmEss` yields the same output (@test-man-pages.R#99) - Reason: On CRAN
    
     ══ Failed ══════════════════════════════════════════════════════════════════════
     ── 1. Failure: get the same with 'gaussian_log' (@test-gets-old-mssm.R#291) ───
     gaussian-log has changed from known value recorded in 'mssm-gaussian-log.RDS'.
     Component "pf_output": Component 1: Component 1: Mean relative difference: 2.946e-06
     Component "pf_output": Component 1: Component 3: Mean relative difference: 2.107e-06
     Component "pf_output": Component 1: Component 4: Mean relative difference: 9.859e-06
     Component "pf_output": Component 2: Component 1: Mean relative difference: 1.35e-06
     Component "pf_output": Component 2: Component 3: Mean relative difference: 7.405e-08
     Component "pf_output": Component 2: Component 4: Mean relative difference: 1.96e-07
     Component "pf_output": Component 3: Component 1: Mean relative difference: 9.774e-07
     Component "pf_output": Component 3: Component 3: Mean relative difference: 2.415e-08
     Component "pf_output": Component 3: Component 4: Mean relative difference: 3.261e-08
     ...
    
     ── 2. Failure: get the same with 'gaussian_log' (@test-gets-old-mssm.R#291) ───
     gaussian-log has changed from known value recorded in 'mssm-smooth-gaussian-log.RDS'.
     100/100 mismatches (average diff: 4.75e-06)
     [1] -4.65 - -4.65 == -4.58e-06
     [2] -4.98 - -4.98 == -5.86e-06
     [3] -4.58 - -4.58 == -2.03e-06
     [4] -4.58 - -4.58 == -3.50e-06
     [5] -4.68 - -4.68 == -9.76e-06
     [6] -4.70 - -4.70 == -7.53e-06
     [7] -4.45 - -4.45 == 2.62e-06
     [8] -4.62 - -4.62 == -5.63e-06
     [9] -4.62 - -4.62 == -6.73e-06
     ...
    
     ── 3. Failure: get the same with 'gaussian_log' (@test-gets-old-mssm.R#291) ───
     gaussian-log has changed from known value recorded in 'mssm-gradient-gaussian-log.RDS'.
     Component 20: Mean relative difference: 1.152e-05
    
     ── 4. Failure: get the same with 'gaussian_log' (@test-gets-old-mssm.R#291) ───
     gaussian-log has changed from known value recorded in 'mssm-gaussian-log-kd.RDS'.
     Component "pf_output": Component 1: Component 1: Mean relative difference: 2.946e-06
     Component "pf_output": Component 1: Component 3: Mean relative difference: 2.107e-06
     Component "pf_output": Component 1: Component 4: Mean relative difference: 9.859e-06
     Component "pf_output": Component 2: Component 1: Mean relative difference: 1.35e-06
     Component "pf_output": Component 2: Component 3: Mean relative difference: 7.405e-08
     Component "pf_output": Component 2: Component 4: Mean relative difference: 1.96e-07
     Component "pf_output": Component 3: Component 1: Mean relative difference: 9.774e-07
     Component "pf_output": Component 3: Component 3: Mean relative difference: 2.415e-08
     Component "pf_output": Component 3: Component 4: Mean relative difference: 3.261e-08
     ...
    
     ── 5. Failure: get the same with 'gaussian_log' (@test-gets-old-mssm.R#291) ───
     gaussian-log has changed from known value recorded in 'mssm-gaussian-log-kd-large-eps.RDS'.
     Component "pf_output": Component 1: Component 1: Mean relative difference: 2.946e-06
     Component "pf_output": Component 1: Component 3: Mean relative difference: 2.107e-06
     Component "pf_output": Component 1: Component 4: Mean relative difference: 9.859e-06
     Component "pf_output": Component 2: Component 1: Mean relative difference: 1.35e-06
     Component "pf_output": Component 2: Component 3: Mean relative difference: 7.589e-08
     Component "pf_output": Component 2: Component 4: Mean relative difference: 1.95e-07
     Component "pf_output": Component 3: Component 1: Mean relative difference: 1.018e-06
     Component "pf_output": Component 3: Component 3: Mean relative difference: 2.287e-08
     Component "pf_output": Component 3: Component 4: Mean relative difference: 3.242e-08
     ...
    
     ── 6. Failure: get the same with 'gaussian_log' (@test-gets-old-mssm.R#291) ───
     gaussian-log has changed from known value recorded in 'mssm-smooth-gaussian-log-kd-.RDS'.
     100/100 mismatches (average diff: 4.77e-06)
     [1] -4.65 - -4.65 == -4.57e-06
     [2] -4.99 - -4.99 == -5.90e-06
     [3] -4.57 - -4.57 == -2.03e-06
     [4] -4.58 - -4.58 == -3.51e-06
     [5] -4.68 - -4.68 == -9.80e-06
     [6] -4.70 - -4.70 == -7.54e-06
     [7] -4.45 - -4.45 == 2.61e-06
     [8] -4.62 - -4.62 == -5.67e-06
     [9] -4.62 - -4.62 == -6.75e-06
     ...
    
     ══ DONE ════════════════════════════════════════════════════════════════════════
     Error: Test failures
     Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.1.1
Check: tests
Result: ERROR
     Running ‘testthat.R’ [17s/17s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(mssm)
     >
     > test_check("mssm", reporter = "summary")
     C++: .
     Test versus old results for kernel methods: .......
     Test versus old results for 'mssm' methods: .............................S......................S......................S......................S......................S......................S......................S...1.2.....3....4..5.6S......................S..
     Testing manual page results: SS...S..S
     Testing miscellaneous functions: .
     Testing sample methods: ....
    
     ══ Skipped ═════════════════════════════════════════════════════════════════════
     1. get the same with 'poisson_log' (@test-gets-old-mssm.R#213) - Reason: On CRAN
    
     2. get the same with 'poisson_sqrt' (@test-gets-old-mssm.R#225) - Reason: On CRAN
    
     3. get the same with 'binomial_logit' (@test-gets-old-mssm.R#236) - Reason: On CRAN
    
     4. get the same with 'binomial_cloglog' (@test-gets-old-mssm.R#248) - Reason: On CRAN
    
     5. get the same with 'binomial_probit' (@test-gets-old-mssm.R#261) - Reason: On CRAN
    
     6. get the same with 'Gamma_log' (@test-gets-old-mssm.R#273) - Reason: On CRAN
    
     7. get the same with 'gaussian_identity' (@test-gets-old-mssm.R#283) - Reason: On CRAN
    
     8. get the same with 'gaussian_log' (@test-gets-old-mssm.R#294) - Reason: On CRAN
    
     9. get the same with 'gaussian_inverse' (@test-gets-old-mssm.R#306) - Reason: On CRAN
    
     10. manual page for 'mssm' yields the same output (@test-man-pages.R#6) - Reason: On CRAN
    
     11. manual page for 'mssm' yields the same output (@test-man-pages.R#6) - Reason: On CRAN
    
     12. manual page for 'plot.mssm' yields the same output (@test-man-pages.R#62) - Reason: On CRAN
    
     13. manual page for 'get_ess.mssm' and `plot.mssmEss` yields the same output (@test-man-pages.R#99) - Reason: On CRAN
    
     ══ Failed ══════════════════════════════════════════════════════════════════════
     ── 1. Failure: get the same with 'gaussian_log' (@test-gets-old-mssm.R#291) ───
     gaussian-log has changed from known value recorded in 'mssm-gaussian-log.RDS'.
     Component "pf_output": Component 1: Component 1: Mean relative difference: 2.946e-06
     Component "pf_output": Component 1: Component 3: Mean relative difference: 2.107e-06
     Component "pf_output": Component 1: Component 4: Mean relative difference: 9.859e-06
     Component "pf_output": Component 2: Component 1: Mean relative difference: 1.35e-06
     Component "pf_output": Component 2: Component 3: Mean relative difference: 7.405e-08
     Component "pf_output": Component 2: Component 4: Mean relative difference: 1.96e-07
     Component "pf_output": Component 3: Component 1: Mean relative difference: 9.774e-07
     Component "pf_output": Component 3: Component 3: Mean relative difference: 2.415e-08
     Component "pf_output": Component 3: Component 4: Mean relative difference: 3.261e-08
     ...
    
     ── 2. Failure: get the same with 'gaussian_log' (@test-gets-old-mssm.R#291) ───
     gaussian-log has changed from known value recorded in 'mssm-smooth-gaussian-log.RDS'.
     100/100 mismatches (average diff: 4.75e-06)
     [1] -4.65 - -4.65 == -4.58e-06
     [2] -4.98 - -4.98 == -5.86e-06
     [3] -4.58 - -4.58 == -2.03e-06
     [4] -4.58 - -4.58 == -3.50e-06
     [5] -4.68 - -4.68 == -9.76e-06
     [6] -4.70 - -4.70 == -7.53e-06
     [7] -4.45 - -4.45 == 2.62e-06
     [8] -4.62 - -4.62 == -5.63e-06
     [9] -4.62 - -4.62 == -6.73e-06
     ...
    
     ── 3. Failure: get the same with 'gaussian_log' (@test-gets-old-mssm.R#291) ───
     gaussian-log has changed from known value recorded in 'mssm-gradient-gaussian-log.RDS'.
     Component 20: Mean relative difference: 1.152e-05
    
     ── 4. Failure: get the same with 'gaussian_log' (@test-gets-old-mssm.R#291) ───
     gaussian-log has changed from known value recorded in 'mssm-gaussian-log-kd.RDS'.
     Component "pf_output": Component 1: Component 1: Mean relative difference: 2.946e-06
     Component "pf_output": Component 1: Component 3: Mean relative difference: 2.107e-06
     Component "pf_output": Component 1: Component 4: Mean relative difference: 9.859e-06
     Component "pf_output": Component 2: Component 1: Mean relative difference: 1.35e-06
     Component "pf_output": Component 2: Component 3: Mean relative difference: 7.405e-08
     Component "pf_output": Component 2: Component 4: Mean relative difference: 1.96e-07
     Component "pf_output": Component 3: Component 1: Mean relative difference: 9.774e-07
     Component "pf_output": Component 3: Component 3: Mean relative difference: 2.415e-08
     Component "pf_output": Component 3: Component 4: Mean relative difference: 3.261e-08
     ...
    
     ── 5. Failure: get the same with 'gaussian_log' (@test-gets-old-mssm.R#291) ───
     gaussian-log has changed from known value recorded in 'mssm-gaussian-log-kd-large-eps.RDS'.
     Component "pf_output": Component 1: Component 1: Mean relative difference: 2.946e-06
     Component "pf_output": Component 1: Component 3: Mean relative difference: 2.107e-06
     Component "pf_output": Component 1: Component 4: Mean relative difference: 9.859e-06
     Component "pf_output": Component 2: Component 1: Mean relative difference: 1.35e-06
     Component "pf_output": Component 2: Component 3: Mean relative difference: 7.589e-08
     Component "pf_output": Component 2: Component 4: Mean relative difference: 1.95e-07
     Component "pf_output": Component 3: Component 1: Mean relative difference: 1.018e-06
     Component "pf_output": Component 3: Component 3: Mean relative difference: 2.287e-08
     Component "pf_output": Component 3: Component 4: Mean relative difference: 3.242e-08
     ...
    
     ── 6. Failure: get the same with 'gaussian_log' (@test-gets-old-mssm.R#291) ───
     gaussian-log has changed from known value recorded in 'mssm-smooth-gaussian-log-kd-.RDS'.
     100/100 mismatches (average diff: 4.77e-06)
     [1] -4.65 - -4.65 == -4.57e-06
     [2] -4.99 - -4.99 == -5.90e-06
     [3] -4.57 - -4.57 == -2.03e-06
     [4] -4.58 - -4.58 == -3.51e-06
     [5] -4.68 - -4.68 == -9.80e-06
     [6] -4.70 - -4.70 == -7.54e-06
     [7] -4.45 - -4.45 == 2.61e-06
     [8] -4.62 - -4.62 == -5.67e-06
     [9] -4.62 - -4.62 == -6.75e-06
     ...
    
     ══ DONE ════════════════════════════════════════════════════════════════════════
     Error: Test failures
     Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc