CRAN Package Check Results for Package warbleR

Last updated on 2019-08-12 09:51:03 CEST.

Check Details

Version: 1.1.15
Check: examples
Result: ERROR
    Running examples in 'warbleR-Ex.R' failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: dfDTW
    > ### Title: Acoustic dissimilarity using dynamic time warping on dominant
    > ### frequency contours
    > ### Aliases: dfDTW
    >
    > ### ** Examples
    >
    > {
    + # set the temp directory
    + # setwd(tempdir())
    +
    + #load data
    + data(list = c("Phae.long1", "Phae.long2","selec.table"))
    + writeWave(Phae.long2, "Phae.long2.wav") #save sound files
    + writeWave(Phae.long1, "Phae.long1.wav")
    +
    + # run function
    + dfDTW(selec.table, length.out = 30, flim = c(1, 12), bp = c(2, 9), wl = 300)
    + }
    measuring dominant frequency contours (step 1 of 2):
    Creating spectrograms overlaid with dominant frequency measurements:
     | | 0 % ~calculating Error in seewave::dfreq(wave, f, wl, wn, ovlp, fftw, at, tlim, threshold, :
     'clip' value has to be superior to 0 and inferior to 1
    Calls: dfDTW ... lapply -> FUN -> dftsFUN -> track_harm -> <Anonymous>
    
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.1.15
Check: for non-standard things in the check directory
Result: NOTE
    Found the following files/directories:
     'Phae.long1-1-c24.wav' 'Phae.long1-1.wav' 'Phae.long1-2-c25.wav'
     'Phae.long1-2.wav' 'Phae.long1-3-c26.wav' 'Phae.long1-3.wav'
     'Phae.long1.wav' 'Phae.long2-1-c27.wav' 'Phae.long2-1.wav'
     'Phae.long2-2-c28.wav' 'Phae.long2-2.wav' 'Phae.long2.wav'
     'Phae.long3-1-c29.wav' 'Phae.long3-1.wav' 'Phae.long3-2-c30.wav'
     'Phae.long3-2.wav' 'Phae.long3-3-c31.wav' 'Phae.long3-3.wav'
     'Phae.long3.wav' 'Phae.long4-1-c32.wav' 'Phae.long4-1.wav'
     'Phae.long4-2-c33.wav' 'Phae.long4-2.wav' 'Phae.long4-3-c34.wav'
     'Phae.long4-3.wav' 'Phae.long4.wav' 'altern-coor.singing.tiff'
     'consolidated_folder' 'folder1' 'folder2' 'ovlp-coor.singing.tiff'
     'uncoord-coor.singing.tiff'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.1.15
Check: installed package size
Result: NOTE
     installed size is 5.5Mb
     sub-directories of 1Mb or more:
     R 1.0Mb
     doc 4.0Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.1.15
Check: examples
Result: ERROR
    Running examples in ‘warbleR-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: dfDTW
    > ### Title: Acoustic dissimilarity using dynamic time warping on dominant
    > ### frequency contours
    > ### Aliases: dfDTW
    >
    > ### ** Examples
    >
    > {
    + # set the temp directory
    + # setwd(tempdir())
    +
    + #load data
    + data(list = c("Phae.long1", "Phae.long2","selec.table"))
    + writeWave(Phae.long2, "Phae.long2.wav") #save sound files
    + writeWave(Phae.long1, "Phae.long1.wav")
    +
    + # run function
    + dfDTW(selec.table, length.out = 30, flim = c(1, 12), bp = c(2, 9), wl = 300)
    + }
    measuring dominant frequency contours (step 1 of 2):
    Creating spectrograms overlaid with dominant frequency measurements:
     | | 0 % ~calculating Error in seewave::dfreq(wave, f, wl, wn, ovlp, fftw, at, tlim, threshold, :
     'clip' value has to be superior to 0 and inferior to 1
    Calls: dfDTW ... lapply -> FUN -> dftsFUN -> track_harm -> <Anonymous>
    
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.1.15
Check: package dependencies
Result: ERROR
    Package required but not available: ‘bioacoustics’
    
    Package suggested but not available for checking: ‘Rraven’
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-release-osx-x86_64

Version: 1.1.15
Check: package dependencies
Result: ERROR
    Package required but not available: ‘bioacoustics’
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-oldrel-osx-x86_64