Last updated on 2019-09-06 07:49:56 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.2 | OK | ||||
| r-devel-linux-x86_64-debian-gcc | 1.0.2 | 27.84 | 299.65 | 327.49 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.0.2 | 552.15 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0.2 | 558.68 | OK | |||
| r-devel-windows-ix86+x86_64 | 1.0.1 | 122.00 | 342.00 | 464.00 | OK | |
| r-patched-linux-x86_64 | 1.0.2 | 44.48 | 360.33 | 404.81 | OK | |
| r-patched-solaris-x86 | 1.0.2 | 669.00 | OK | |||
| r-release-linux-x86_64 | 1.0.2 | 41.12 | 361.53 | 402.65 | OK | |
| r-release-windows-ix86+x86_64 | 1.0.2 | 109.00 | 316.00 | 425.00 | OK | |
| r-release-osx-x86_64 | 1.0.2 | ERROR | ||||
| r-oldrel-windows-ix86+x86_64 | 1.0.1 | 53.00 | 459.00 | 512.00 | OK | |
| r-oldrel-osx-x86_64 | 1.0.2 | ERROR |
Version: 1.0.2
Check: examples
Result: ERROR
Running examples in ‘GREP2-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: get_metadata
> ### Title: Download metadata from GEO and SRA
> ### Aliases: get_metadata
>
> ### ** Examples
>
>
> get_metadata(geo_series_acc="GSE102170",destdir=tempdir(),
+ geo_only=TRUE,download_method="auto")
Error: XML content does not seem to be XML: 'ChannelException at remote address: 130.14.22.147/130.14.22.147:28244 from service: #/consul/bethesda-prod/svc-http-ratecontrol-318-4147-app01. Remote Info: Upstream Address: Not Available, Upstream id: Not Available, Downstream Address: /130.14.22.147:28244, Downstream label: #/consul/bethesda-prod/svc-http-ratecontrol-318-4147-app01, Trace Id: 979a7e15ab3bb5e0.db12a987323eec2e<:979a7e15ab3bb5e0'
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.0.2
Check: package dependencies
Result: ERROR
Packages required but not available:
'GEOquery', 'Biobase', 'tximport', 'EnsDb.Hsapiens.v86',
'EnsDb.Rnorvegicus.v79', 'EnsDb.Mmusculus.v79', 'AnnotationDbi',
'org.Hs.eg.db', 'org.Mm.eg.db', 'org.Rn.eg.db', 'GenomicFeatures'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-release-osx-x86_64
Version: 1.0.2
Check: package dependencies
Result: ERROR
Packages required but not available:
‘tximport’ ‘EnsDb.Hsapiens.v86’ ‘EnsDb.Rnorvegicus.v79’
‘EnsDb.Mmusculus.v79’ ‘org.Mm.eg.db’ ‘org.Rn.eg.db’ ‘GenomicFeatures’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-oldrel-osx-x86_64