Last updated on 2019-10-31 08:47:41 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-gcc | 1.0-2 | 145.81 | 81.80 | 227.61 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.0-2 | 445.37 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0-2 | 409.58 | OK | |||
| r-devel-windows-ix86+x86_64 | 1.0-2 | 397.00 | 245.00 | 642.00 | NOTE | |
| r-patched-solaris-x86 | 1.0-2 | 305.80 | ERROR | |||
| r-release-windows-ix86+x86_64 | 1.0-2 | 325.00 | 182.00 | 507.00 | NOTE | |
| r-release-osx-x86_64 | 1.0-0 | NOTE | ||||
| r-oldrel-osx-x86_64 | 1.0-0 | NOTE |
Version: 1.0-2
Check: installed package size
Result: NOTE
installed size is 16.1Mb
sub-directories of 1Mb or more:
data 1.5Mb
libs 13.9Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64
Version: 1.0-2
Check: examples
Result: ERROR
Running examples in ‘BayesSUR-Ex.R’ failed
The error most likely occurred in:
> ### Name: BayesSUR
> ### Title: main function of the package
> ### Aliases: BayesSUR BayesSUR-package
>
> ### ** Examples
>
> data("example_eQTL", package = "BayesSUR")
> hyperpar <- list( a_w = 2 , b_w = 5 )
>
> fit <- BayesSUR(Y = example_eQTL[["blockList"]][[1]],
+ X = example_eQTL[["blockList"]][[2]],
+ data = example_eQTL[["data"]], outFilePath = tempdir(),
+ nIter = 100, burnin = 50, nChains = 2, gammaPrior = "hotspot",
+ hyperpar = hyperpar, tmpFolder = "tmp/" )
BayesSUR -- Bayesian Seemingly Unrelated Regression Modelling
Using OpenMP
Reading input files ... ... successfull!
Clearing and initialising output files
Init RNG engine .. DONE !
Initialising the (SUR) MCMC Chain ... ... DONE!
Drafting the output files with the start of the chain ... DONE!
Starting 2 (parallel) chain(s) for 100 iterations:
warning: inv_sympd(): given matrix is not symmetric
error: inv_sympd(): matrix is singular or not positive definite
error: matrix multiplication: incompatible matrix dimensions: 0x0 and 36x1
terminate called after throwing an instance of 'std::logic_error'
what(): matrix multiplication: incompatible matrix dimensions: 0x0 and 36x1
Flavor: r-patched-solaris-x86
Version: 1.0-0
Check: installed package size
Result: NOTE
installed size is 15.9Mb
sub-directories of 1Mb or more:
data 1.5Mb
libs 13.7Mb
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64
Version: 1.0-0
Check: dependencies in R code
Result: NOTE
Namespaces in Imports field not imported from:
‘BDgraph’ ‘data.table’ ‘gRbase’ ‘plyr’ ‘scrime’
All declared Imports should be used.
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64