CRAN Package Check Results for Package BatchMap

Last updated on 2019-12-10 13:46:30 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.2.0 103.92 172.71 276.63 NOTE
r-devel-linux-x86_64-debian-gcc 1.0.2.0 72.90 130.03 202.93 NOTE
r-devel-linux-x86_64-fedora-clang 1.0.2.0 357.23 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0.2.0 334.12 NOTE
r-devel-windows-ix86+x86_64 1.0.2.0 186.00 212.00 398.00 ERROR
r-devel-windows-ix86+x86_64-gcc8 1.0.2.0 207.00 203.00 410.00 ERROR
r-patched-linux-x86_64 1.0.2.0 87.59 153.24 240.83 OK
r-patched-solaris-x86 1.0.2.0 222.00 ERROR
r-release-linux-x86_64 1.0.2.0 83.73 154.37 238.10 OK
r-release-windows-ix86+x86_64 1.0.2.0 184.00 197.00 381.00 ERROR
r-release-osx-x86_64 1.0.2.0 OK
r-oldrel-windows-ix86+x86_64 1.0.2.0 180.00 191.00 371.00 ERROR
r-oldrel-osx-x86_64 1.0.2.0 OK

Additional issues

clang-UBSAN LTO

Check Details

Version: 1.0.2.0
Check: for non-standard things in the check directory
Result: NOTE
    Found the following files/directories:
     'MyRawData_out.jpg' 'SegregationTests.jpg' 'SegregationTypes.jpg'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.0.2.0
Check: running examples for arch ‘i386’
Result: ERROR
    Running examples in 'BatchMap-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: add.marker
    > ### Title: Creates a new sequence by adding markers.
    > ### Aliases: add.marker
    >
    > ### ** Examples
    >
    > data(example.out)
    > twopt <- rf.2pts(example.out)
    Error in est_rf_out(geno = input.obj$geno, seg_type = input.obj$segr.type.num, :
     function 'dataptr' not provided by package 'Rcpp'
    Calls: rf.2pts -> est_rf_out
    Execution halted
Flavors: r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0.2.0
Check: running examples for arch ‘x64’
Result: ERROR
    Running examples in 'BatchMap-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: add.marker
    > ### Title: Creates a new sequence by adding markers.
    > ### Aliases: add.marker
    >
    > ### ** Examples
    >
    > data(example.out)
    > twopt <- rf.2pts(example.out)
    Error in est_rf_out(geno = input.obj$geno, seg_type = input.obj$segr.type.num, :
     function 'dataptr' not provided by package 'Rcpp'
    Calls: rf.2pts -> est_rf_out
    Execution halted
Flavors: r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0.2.0
Check: examples
Result: ERROR
    Running examples in ‘BatchMap-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: add.marker
    > ### Title: Creates a new sequence by adding markers.
    > ### Aliases: add.marker
    >
    > ### ** Examples
    >
    > data(example.out)
    > twopt <- rf.2pts(example.out)
    Error in est_rf_out(geno = input.obj$geno, seg_type = input.obj$segr.type.num, :
     function 'dataptr' not provided by package 'Rcpp'
    Calls: rf.2pts -> est_rf_out
    Execution halted
Flavor: r-patched-solaris-x86

Version: 1.0.2.0
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘BatchMap.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Quitting from lines 32-37 (BatchMap.Rmd)
    Error: processing vignette 'BatchMap.Rmd' failed with diagnostics:
    function 'enterRNGScope' not provided by package 'Rcpp'
    --- failed re-building ‘BatchMap.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘BatchMap.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86