Last updated on 2019-12-21 10:47:50 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.6 | 11.06 | 72.65 | 83.71 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 2.6 | 10.12 | 55.30 | 65.42 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 2.6 | 120.93 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 2.6 | 108.69 | NOTE | |||
| r-devel-windows-ix86+x86_64 | 2.6 | 37.00 | 89.00 | 126.00 | NOTE | |
| r-devel-windows-ix86+x86_64-gcc8 | 2.6 | 35.00 | 90.00 | 125.00 | NOTE | |
| r-patched-linux-x86_64 | 2.6 | NOTE | ||||
| r-patched-solaris-x86 | 2.6 | 145.60 | NOTE | |||
| r-release-linux-x86_64 | 2.6 | 8.66 | 69.53 | 78.19 | NOTE | |
| r-release-windows-ix86+x86_64 | 2.6 | 17.00 | 121.00 | 138.00 | NOTE | |
| r-release-osx-x86_64 | 2.6 | NOTE | ||||
| r-oldrel-windows-ix86+x86_64 | 2.6 | 13.00 | 117.00 | 130.00 | NOTE | |
| r-oldrel-osx-x86_64 | 2.6 | NOTE |
Version: 2.6
Check: dependencies in R code
Result: NOTE
Package in Depends field not imported from: 'logistf'
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 2.6
Check: R code for possible problems
Result: NOTE
mbmdr : NextModel: no visible global function definition for
'read.table'
mbmdr : OffsetFit: no visible global function definition for 'glm'
mbmdr : Regresion: no visible global function definition for 'logistf'
mbmdr : Regresion: no visible global function definition for 'glm'
mbmdr: no visible global function definition for 'write.table'
mbmdr.PermTest: no visible global function definition for 'read.table'
mbmdr.PermTest: no visible global function definition for 'qnorm'
print.mbmdr: no visible global function definition for 'read.table'
summary.mbmdr: no visible global function definition for 'read.table'
Undefined global functions or variables:
glm logistf qnorm read.table write.table
Consider adding
importFrom("stats", "glm", "qnorm")
importFrom("utils", "read.table", "write.table")
to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 2.6
Check: examples
Result: ERROR
Running examples in 'mbmdr-Ex.R' failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: mbmdr.PermTest
> ### Title: Permutation Test for exploring significance of MB-MDR result.
> ### Aliases: mbmdr.PermTest print.mbmdr.PermTest
>
> ### ** Examples
>
> data(simSNP)
> fit <- mbmdr(y=simSNP$Y,data=simSNP[,3:12],order=2,list.models=c(2,1),
+ family=binomial(link=logit))
Error in switch(class(l.list), matrix = { :
EXPR must be a length 1 vector
Calls: mbmdr
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc