Last updated on 2020-02-02 07:58:49 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0 | 3.42 | 28.08 | 31.50 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 1.0 | 2.62 | 22.91 | 25.53 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 1.0 | 39.88 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0 | 38.96 | NOTE | |||
| r-devel-windows-ix86+x86_64 | 1.0 | 7.00 | 57.00 | 64.00 | NOTE | |
| r-devel-windows-ix86+x86_64-gcc8 | 1.0 | 10.00 | 54.00 | 64.00 | NOTE | |
| r-patched-linux-x86_64 | 1.0 | 2.33 | 26.26 | 28.59 | NOTE | |
| r-patched-solaris-x86 | 1.0 | 56.20 | NOTE | |||
| r-release-linux-x86_64 | 1.0 | 2.18 | 27.13 | 29.31 | NOTE | |
| r-release-windows-ix86+x86_64 | 1.0 | 5.00 | 41.00 | 46.00 | NOTE | |
| r-release-osx-x86_64 | 1.0 | NOTE | ||||
| r-oldrel-windows-ix86+x86_64 | 1.0 | 3.00 | 35.00 | 38.00 | NOTE | |
| r-oldrel-osx-x86_64 | 1.0 | NOTE |
Version: 1.0
Check: DESCRIPTION meta-information
Result: NOTE
Deprecated license: BSD
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64, r-oldrel-osx-x86_64
Version: 1.0
Check: top-level files
Result: NOTE
Non-standard file/directory found at top level:
'sample'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 1.0
Check: dependencies in R code
Result: NOTE
'library' or 'require' call to 'XML' which was already attached by Depends.
Please remove these calls from your code.
Package in Depends field not imported from: 'XML'
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 1.0
Check: R code for possible problems
Result: NOTE
csv2list: no visible global function definition for 'read.csv'
kgml_i: no visible global function definition for 'xmlTreeParse'
kgml_i: no visible global function definition for 'xmlRoot'
kgml_i: no visible global function definition for 'xmlAttrs'
list2xml: no visible global function definition for 'xmlNode'
list2xml: no visible global function definition for 'append.xmlNode'
msea_ora: no visible global function definition for 'fisher.test'
msea_ora: no visible global function definition for 'p.adjust'
msea_sub: no visible global function definition for 'sd'
msea_sub: no visible global function definition for 'cor.test'
pathway_class: no visible global function definition for 'untar'
pca_scaled: no visible binding for global variable 'sd'
pca_scaled: no visible global function definition for 'cor.test'
pca_scaled: no visible global function definition for 'p.adjust'
pca_scaled: no visible binding for global variable 'var'
read_pathway: no visible global function definition for 'xmlTreeParse'
read_pathway: no visible global function definition for 'xmlRoot'
read_pathway: no visible global function definition for 'xmlToList'
read_pathway: no visible global function definition for 'xmlAttrs'
Undefined global functions or variables:
append.xmlNode cor.test fisher.test p.adjust read.csv sd untar var
xmlAttrs xmlNode xmlRoot xmlToList xmlTreeParse
Consider adding
importFrom("stats", "cor.test", "fisher.test", "p.adjust", "sd", "var")
importFrom("utils", "read.csv", "untar")
to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64