Last updated on 2020-02-19 14:48:23 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.5-3 | 3.07 | 27.24 | 30.31 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.5-3 | 2.34 | 22.90 | 25.24 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.5-3 | 38.56 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 1.5-3 | 38.20 | ERROR | |||
| r-devel-windows-ix86+x86_64 | 1.5-3 | 10.00 | 55.00 | 65.00 | NOTE | |
| r-devel-windows-ix86+x86_64-gcc8 | 1.5-3 | 15.00 | 71.00 | 86.00 | NOTE | |
| r-patched-linux-x86_64 | 1.5-3 | 2.12 | 27.43 | 29.55 | NOTE | |
| r-patched-solaris-x86 | 1.5-3 | 60.00 | NOTE | |||
| r-release-linux-x86_64 | 1.5-3 | 2.32 | 27.66 | 29.98 | NOTE | |
| r-release-windows-ix86+x86_64 | 1.5-3 | 9.00 | 76.00 | 85.00 | NOTE | |
| r-release-osx-x86_64 | 1.5-3 | NOTE | ||||
| r-oldrel-windows-ix86+x86_64 | 1.5-3 | 8.00 | 48.00 | 56.00 | NOTE | |
| r-oldrel-osx-x86_64 | 1.5-3 | NOTE |
Version: 1.5-3
Check: R code for possible problems
Result: NOTE
defineTasks: no visible global function definition for 'par'
defineTasks: no visible global function definition for 'abline'
plotCorCoeff: no visible global function definition for 'hist'
plotCorCoeff: no visible global function definition for 'plot.new'
plotCorCoeff: no visible global function definition for 'plot.window'
plotCorCoeff: no visible global function definition for 'rect'
plotCorCoeff: no visible global function definition for 'axis'
plotCorCoeff: no visible global function definition for 'title'
plotCorCoeff: no visible global function definition for 'legend'
Undefined global functions or variables:
abline axis hist legend par plot.new plot.window rect title
Consider adding
importFrom("graphics", "abline", "axis", "hist", "legend", "par",
"plot.new", "plot.window", "rect", "title")
to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-windows-ix86+x86_64, r-oldrel-osx-x86_64
Version: 1.5-3
Check: examples
Result: ERROR
Running examples in 'PCIT-Ex.R' failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: idxInvert
> ### Title: Invert linear indices from a matrix
> ### Aliases: idxInvert
>
> ### ** Examples
>
> m <- matrix(1, 5, 5)
> diag(m) <- 0
> m
[,1] [,2] [,3] [,4] [,5]
[1,] 0 1 1 1 1
[2,] 1 0 1 1 1
[3,] 1 1 0 1 1
[4,] 1 1 1 0 1
[5,] 1 1 1 1 0
> idx <- which(m==0)
> idx
[1] 1 7 13 19 25
> idxInvert(m, idx)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
PCIT
--- call from context ---
idxInvert(m, idx)
--- call from argument ---
if (class(m) == "numeric" | class(m) == "integer") {
nNodes <- m
} else {
nNodes <- try(nrow(m), silent = TRUE)
if (class(nNodes) == "try-error" | is.null(nNodes)) {
cat("ERROR: argument 'm' must be a numeric OR an object on which nrow() can be performed.\n\n",
geterrmessage())
return(FALSE)
}
}
--- R stacktrace ---
where 1: idxInvert(m, idx)
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (m, idx)
{
if (class(m) == "numeric" | class(m) == "integer") {
nNodes <- m
}
else {
nNodes <- try(nrow(m), silent = TRUE)
if (class(nNodes) == "try-error" | is.null(nNodes)) {
cat("ERROR: argument 'm' must be a numeric OR an object on which nrow() can be performed.\n\n",
geterrmessage())
return(FALSE)
}
}
return(setdiff(1:(nNodes^2), idx))
}
<bytecode: 0x283d170>
<environment: namespace:PCIT>
--- function search by body ---
Function idxInvert in namespace PCIT has this body.
----------- END OF FAILURE REPORT --------------
Error in if (class(m) == "numeric" | class(m) == "integer") { :
the condition has length > 1
Calls: idxInvert
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.5-3
Check: for non-standard things in the check directory
Result: NOTE
Found the following files/directories:
'el.txt'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 1.5-3
Check: examples
Result: ERROR
Running examples in ‘PCIT-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: idxInvert
> ### Title: Invert linear indices from a matrix
> ### Aliases: idxInvert
>
> ### ** Examples
>
> m <- matrix(1, 5, 5)
> diag(m) <- 0
> m
[,1] [,2] [,3] [,4] [,5]
[1,] 0 1 1 1 1
[2,] 1 0 1 1 1
[3,] 1 1 0 1 1
[4,] 1 1 1 0 1
[5,] 1 1 1 1 0
> idx <- which(m==0)
> idx
[1] 1 7 13 19 25
> idxInvert(m, idx)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
PCIT
--- call from context ---
idxInvert(m, idx)
--- call from argument ---
if (class(m) == "numeric" | class(m) == "integer") {
nNodes <- m
} else {
nNodes <- try(nrow(m), silent = TRUE)
if (class(nNodes) == "try-error" | is.null(nNodes)) {
cat("ERROR: argument 'm' must be a numeric OR an object on which nrow() can be performed.\n\n",
geterrmessage())
return(FALSE)
}
}
--- R stacktrace ---
where 1: idxInvert(m, idx)
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (m, idx)
{
if (class(m) == "numeric" | class(m) == "integer") {
nNodes <- m
}
else {
nNodes <- try(nrow(m), silent = TRUE)
if (class(nNodes) == "try-error" | is.null(nNodes)) {
cat("ERROR: argument 'm' must be a numeric OR an object on which nrow() can be performed.\n\n",
geterrmessage())
return(FALSE)
}
}
return(setdiff(1:(nNodes^2), idx))
}
<bytecode: 0x5593fc431ad0>
<environment: namespace:PCIT>
--- function search by body ---
Function idxInvert in namespace PCIT has this body.
----------- END OF FAILURE REPORT --------------
Error in if (class(m) == "numeric" | class(m) == "integer") { :
the condition has length > 1
Calls: idxInvert
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.5-3
Check: compiled code
Result: NOTE
File ‘PCIT/libs/PCIT.so’:
Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
It is good practice to register native routines and to disable symbol
search.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 1.5-3
Check: examples
Result: ERROR
Running examples in ‘PCIT-Ex.R’ failed
The error most likely occurred in:
> ### Name: idxInvert
> ### Title: Invert linear indices from a matrix
> ### Aliases: idxInvert
>
> ### ** Examples
>
> m <- matrix(1, 5, 5)
> diag(m) <- 0
> m
[,1] [,2] [,3] [,4] [,5]
[1,] 0 1 1 1 1
[2,] 1 0 1 1 1
[3,] 1 1 0 1 1
[4,] 1 1 1 0 1
[5,] 1 1 1 1 0
> idx <- which(m==0)
> idx
[1] 1 7 13 19 25
> idxInvert(m, idx)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
PCIT
--- call from context ---
idxInvert(m, idx)
--- call from argument ---
if (class(m) == "numeric" | class(m) == "integer") {
nNodes <- m
} else {
nNodes <- try(nrow(m), silent = TRUE)
if (class(nNodes) == "try-error" | is.null(nNodes)) {
cat("ERROR: argument 'm' must be a numeric OR an object on which nrow() can be performed.\n\n",
geterrmessage())
return(FALSE)
}
}
--- R stacktrace ---
where 1: idxInvert(m, idx)
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (m, idx)
{
if (class(m) == "numeric" | class(m) == "integer") {
nNodes <- m
}
else {
nNodes <- try(nrow(m), silent = TRUE)
if (class(nNodes) == "try-error" | is.null(nNodes)) {
cat("ERROR: argument 'm' must be a numeric OR an object on which nrow() can be performed.\n\n",
geterrmessage())
return(FALSE)
}
}
return(setdiff(1:(nNodes^2), idx))
}
<bytecode: 0x29f0de8>
<environment: namespace:PCIT>
--- function search by body ---
Function idxInvert in namespace PCIT has this body.
----------- END OF FAILURE REPORT --------------
Error in if (class(m) == "numeric" | class(m) == "integer") { :
the condition has length > 1
Calls: idxInvert
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.5-3
Check: examples
Result: ERROR
Running examples in ‘PCIT-Ex.R’ failed
The error most likely occurred in:
> ### Name: idxInvert
> ### Title: Invert linear indices from a matrix
> ### Aliases: idxInvert
>
> ### ** Examples
>
> m <- matrix(1, 5, 5)
> diag(m) <- 0
> m
[,1] [,2] [,3] [,4] [,5]
[1,] 0 1 1 1 1
[2,] 1 0 1 1 1
[3,] 1 1 0 1 1
[4,] 1 1 1 0 1
[5,] 1 1 1 1 0
> idx <- which(m==0)
> idx
[1] 1 7 13 19 25
> idxInvert(m, idx)
----------- FAILURE REPORT --------------
--- failure: the condition has length > 1 ---
--- srcref ---
:
--- package (from environment) ---
PCIT
--- call from context ---
idxInvert(m, idx)
--- call from argument ---
if (class(m) == "numeric" | class(m) == "integer") {
nNodes <- m
} else {
nNodes <- try(nrow(m), silent = TRUE)
if (class(nNodes) == "try-error" | is.null(nNodes)) {
cat("ERROR: argument 'm' must be a numeric OR an object on which nrow() can be performed.\n\n",
geterrmessage())
return(FALSE)
}
}
--- R stacktrace ---
where 1: idxInvert(m, idx)
--- value of length: 2 type: logical ---
[1] FALSE FALSE
--- function from context ---
function (m, idx)
{
if (class(m) == "numeric" | class(m) == "integer") {
nNodes <- m
}
else {
nNodes <- try(nrow(m), silent = TRUE)
if (class(nNodes) == "try-error" | is.null(nNodes)) {
cat("ERROR: argument 'm' must be a numeric OR an object on which nrow() can be performed.\n\n",
geterrmessage())
return(FALSE)
}
}
return(setdiff(1:(nNodes^2), idx))
}
<bytecode: 0x4195bf8>
<environment: namespace:PCIT>
--- function search by body ---
Function idxInvert in namespace PCIT has this body.
----------- END OF FAILURE REPORT --------------
Error in if (class(m) == "numeric" | class(m) == "integer") { :
the condition has length > 1
Calls: idxInvert
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 1.5-3
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘Rmpi’
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64