Last updated on 2020-03-03 15:50:05 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.3 | 5.05 | 20.75 | 25.80 | WARN | |
| r-devel-linux-x86_64-debian-gcc | 0.3 | 3.20 | 16.91 | 20.11 | WARN | |
| r-devel-linux-x86_64-fedora-clang | 0.3 | 33.48 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 0.3 | 30.72 | WARN | |||
| r-devel-windows-ix86+x86_64 | 0.3 | 16.00 | 40.00 | 56.00 | OK | |
| r-devel-windows-ix86+x86_64-gcc8 | 0.3 | 15.00 | 42.00 | 57.00 | WARN | |
| r-patched-linux-x86_64 | 0.3 | 3.24 | 19.46 | 22.70 | OK | |
| r-patched-solaris-x86 | 0.3 | 46.90 | OK | |||
| r-release-linux-x86_64 | 0.3 | 2.86 | 19.76 | 22.62 | OK | |
| r-release-windows-ix86+x86_64 | 0.3 | 15.00 | 60.00 | 75.00 | OK | |
| r-release-osx-x86_64 | 0.3 | ERROR | ||||
| r-oldrel-windows-ix86+x86_64 | 0.3 | 13.00 | 39.00 | 52.00 | OK | |
| r-oldrel-osx-x86_64 | 0.3 | ERROR |
Version: 0.3
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
init.c:63:3: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result]
init.c:64:3: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result]
init.c:95:11: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result]
init.c:100:5: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result]
init.c:132:3: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result]
init.c:142:7: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result]
init.c:153:3: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result]
init.c:156:3: warning: ignoring return value of function declared with 'warn_unused_result' attribute [-Wunused-result]
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.3
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
MaxChi.c:468:20: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict]
Phylpro.c:457:24: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict]
init.c:63:3: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result]
init.c:64:3: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result]
init.c:95:11: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result]
init.c:100:5: warning: ignoring return value of ‘fscanf’, declared with attribute warn_unused_result [-Wunused-result]
init.c:132:3: warning: ignoring return value of ‘scanf’, declared with attribute warn_unused_result [-Wunused-result]
init.c:142:7: warning: ignoring return value of ‘scanf’, declared with attribute warn_unused_result [-Wunused-result]
init.c:153:3: warning: ignoring return value of ‘scanf’, declared with attribute warn_unused_result [-Wunused-result]
init.c:156:3: warning: ignoring return value of ‘scanf’, declared with attribute warn_unused_result [-Wunused-result]
Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-gcc
Version: 0.3
Check: compiled code
Result: NOTE
File ‘stepwise/libs/stepwise.so’:
Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
It is good practice to register native routines and to disable symbol
search.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.3
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
MaxChi.c:468:20: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict]
Phylpro.c:457:24: warning: passing argument 1 to restrict-qualified parameter aliases with argument 3 [-Wrestrict]
Flavor: r-devel-windows-ix86+x86_64-gcc8
Version: 0.3
Check: examples
Result: ERROR
Running examples in ‘stepwise-Ex.R’ failed
The error most likely occurred in:
> ### Name: maxchi
> ### Title: Stepwise detection of recombination breakpoints using MaxChi
> ### Aliases: maxchi
> ### Keywords: htest
>
> ### ** Examples
> demo(maxchi)
demo(maxchi)
---- ~~~~~~
> inputFile<- system.file("extdata", "simulinfile.txt", package = "stepwise")
> breaks<-c(531,616,810)
> WinHalfWidth<-30
> permReps<-10
> a<-maxchi(inputFile, breaks, WinHalfWidth, permReps)
Flavors: r-release-osx-x86_64, r-oldrel-osx-x86_64