Last updated on 2020-03-05 05:47:45 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 16.65 | 285.79 | 302.44 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 15.60 | 212.90 | 228.50 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 358.45 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 336.92 | ERROR | |||
| r-devel-windows-ix86+x86_64 | 1.1.4 | 56.00 | 476.00 | 532.00 | OK | |
| r-devel-windows-ix86+x86_64-gcc8 | 1.1.4 | 36.00 | 344.00 | 380.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 16.00 | 246.36 | 262.36 | ERROR | |
| r-patched-solaris-x86 | 1.1.4 | 459.90 | ERROR | |||
| r-release-linux-x86_64 | 1.1.4 | 13.82 | 248.56 | 262.38 | ERROR | |
| r-release-windows-ix86+x86_64 | 1.1.4 | 32.00 | 307.00 | 339.00 | OK | |
| r-release-osx-x86_64 | 1.1.4 | ERROR | ||||
| r-oldrel-windows-ix86+x86_64 | 1.1.4 | 21.00 | 343.00 | 364.00 | OK | |
| r-oldrel-osx-x86_64 | 1.1.4 | NOTE |
Version: 1.1.4
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: 'dyndimred'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64
Version: 1.1.4
Check: Rd cross-references
Result: NOTE
Unknown package 'dyndimred' in Rd xrefs
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64
Version: 1.1.4
Check: examples
Result: ERROR
Running examples in 'dynwrap-Ex.R' failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: add_dimred
> ### Title: Add or create a dimensionality reduction
> ### Aliases: add_dimred is_wrapper_with_dimred get_dimred
> ### Keywords: adapt_trajectory
>
> ### ** Examples
>
> dataset <- example_dataset
> dataset <- add_dimred(
+ dataset,
+ dyndimred::dimred_landmark_mds
+ )
Error in loadNamespace(name) : there is no package called 'dyndimred'
Calls: add_dimred ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running 'testthat.R' [144s/154s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(dynwrap)
>
> test_check("dynwrap")
-- 1. Error: (unknown) (@test-method_infer_trajectory.R#3) --------------------
there is no package called 'dyndimred'
Backtrace:
1. base::source(...)
27. dyndimred::list_dimred_methods
28. base::getExportedValue(pkg, name)
29. base::asNamespace(ns)
30. base::getNamespace(ns)
31. base::loadNamespace(name)
32. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
33. base:::withOneRestart(expr, restarts[[1L]])
34. base:::doWithOneRestart(return(expr), restart)
-- 2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_
there is no package called 'dyndimred'
Backtrace:
9. dynwrap::add_dimred(., dimred = dyndimred::dimred_pca)
11. base::getExportedValue(pkg, name)
12. base::asNamespace(ns)
13. base::getNamespace(ns)
14. base::loadNamespace(name)
15. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
16. base:::withOneRestart(expr, restarts[[1L]])
17. base:::doWithOneRestart(return(expr), restart)
-- 3. Error: Test get_dimred (@test-wrap_add_dimred.R#278) --------------------
there is no package called 'dyndimred'
Backtrace:
1. dynwrap::get_dimred(wr_withdimred, dimred = dyndimred::dimred_pca)
2. dyndimred::dimred_pca
3. base::getExportedValue(pkg, name)
4. base::asNamespace(ns)
5. base::getNamespace(ns)
6. base::loadNamespace(name)
7. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
8. base:::withOneRestart(expr, restarts[[1L]])
9. base:::doWithOneRestart(return(expr), restart)
== testthat results ===========================================================
[ OK: 918 | SKIPPED: 1 | WARNINGS: 0 | FAILED: 3 ]
1. Error: (unknown) (@test-method_infer_trajectory.R#3)
2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_dimred.R#110)
3. Error: Test get_dimred (@test-wrap_add_dimred.R#278)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [104s/151s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(dynwrap)
>
> test_check("dynwrap")
── 1. Error: (unknown) (@test-method_infer_trajectory.R#3) ────────────────────
there is no package called 'dyndimred'
Backtrace:
1. base::source(...)
27. dyndimred::list_dimred_methods
28. base::getExportedValue(pkg, name)
29. base::asNamespace(ns)
30. base::getNamespace(ns)
31. base::loadNamespace(name)
32. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
33. base:::withOneRestart(expr, restarts[[1L]])
34. base:::doWithOneRestart(return(expr), restart)
── 2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_
there is no package called 'dyndimred'
Backtrace:
9. dynwrap::add_dimred(., dimred = dyndimred::dimred_pca)
11. base::getExportedValue(pkg, name)
12. base::asNamespace(ns)
13. base::getNamespace(ns)
14. base::loadNamespace(name)
15. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
16. base:::withOneRestart(expr, restarts[[1L]])
17. base:::doWithOneRestart(return(expr), restart)
── 3. Error: Test get_dimred (@test-wrap_add_dimred.R#278) ────────────────────
there is no package called 'dyndimred'
Backtrace:
1. dynwrap::get_dimred(wr_withdimred, dimred = dyndimred::dimred_pca)
2. dyndimred::dimred_pca
3. base::getExportedValue(pkg, name)
4. base::asNamespace(ns)
5. base::getNamespace(ns)
6. base::loadNamespace(name)
7. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
8. base:::withOneRestart(expr, restarts[[1L]])
9. base:::doWithOneRestart(return(expr), restart)
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 918 | SKIPPED: 1 | WARNINGS: 0 | FAILED: 3 ]
1. Error: (unknown) (@test-method_infer_trajectory.R#3)
2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_dimred.R#110)
3. Error: Test get_dimred (@test-wrap_add_dimred.R#278)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.1.4
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘dyndimred’
Imports includes 22 non-default packages.
Importing from so many packages makes the package vulnerable to any of
them becoming unavailable. Move as many as possible to Suggests and
use conditionally.
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.1.4
Check: dependencies in R code
Result: NOTE
Namespaces in Imports field not imported from:
‘hdf5r’ ‘jsonlite’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64
Version: 1.1.4
Check: examples
Result: ERROR
Running examples in ‘dynwrap-Ex.R’ failed
The error most likely occurred in:
> ### Name: add_dimred
> ### Title: Add or create a dimensionality reduction
> ### Aliases: add_dimred is_wrapper_with_dimred get_dimred
> ### Keywords: adapt_trajectory
>
> ### ** Examples
>
> dataset <- example_dataset
> dataset <- add_dimred(
+ dataset,
+ dyndimred::dimred_landmark_mds
+ )
Error in loadNamespace(name) : there is no package called ‘dyndimred’
Calls: add_dimred ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [168s/217s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(dynwrap)
>
> test_check("dynwrap")
── 1. Error: (unknown) (@test-method_infer_trajectory.R#3) ────────────────────
there is no package called 'dyndimred'
Backtrace:
1. base::source(...)
27. dyndimred::list_dimred_methods
28. base::getExportedValue(pkg, name)
29. base::asNamespace(ns)
30. base::getNamespace(ns)
31. base::loadNamespace(name)
32. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
33. base:::withOneRestart(expr, restarts[[1L]])
34. base:::doWithOneRestart(return(expr), restart)
── 2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_
there is no package called 'dyndimred'
Backtrace:
9. dynwrap::add_dimred(., dimred = dyndimred::dimred_pca)
11. base::getExportedValue(pkg, name)
12. base::asNamespace(ns)
13. base::getNamespace(ns)
14. base::loadNamespace(name)
15. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
16. base:::withOneRestart(expr, restarts[[1L]])
17. base:::doWithOneRestart(return(expr), restart)
── 3. Error: Test get_dimred (@test-wrap_add_dimred.R#278) ────────────────────
there is no package called 'dyndimred'
Backtrace:
1. dynwrap::get_dimred(wr_withdimred, dimred = dyndimred::dimred_pca)
2. dyndimred::dimred_pca
3. base::getExportedValue(pkg, name)
4. base::asNamespace(ns)
5. base::getNamespace(ns)
6. base::loadNamespace(name)
7. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
8. base:::withOneRestart(expr, restarts[[1L]])
9. base:::doWithOneRestart(return(expr), restart)
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 918 | SKIPPED: 1 | WARNINGS: 0 | FAILED: 3 ]
1. Error: (unknown) (@test-method_infer_trajectory.R#3)
2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_dimred.R#110)
3. Error: Test get_dimred (@test-wrap_add_dimred.R#278)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [154s/172s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(dynwrap)
>
> test_check("dynwrap")
── 1. Error: (unknown) (@test-method_infer_trajectory.R#3) ────────────────────
there is no package called 'dyndimred'
Backtrace:
1. base::source(...)
27. dyndimred::list_dimred_methods
28. base::getExportedValue(pkg, name)
29. base::asNamespace(ns)
30. base::getNamespace(ns)
31. base::loadNamespace(name)
32. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
33. base:::withOneRestart(expr, restarts[[1L]])
34. base:::doWithOneRestart(return(expr), restart)
── 2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_
there is no package called 'dyndimred'
Backtrace:
9. dynwrap::add_dimred(., dimred = dyndimred::dimred_pca)
11. base::getExportedValue(pkg, name)
12. base::asNamespace(ns)
13. base::getNamespace(ns)
14. base::loadNamespace(name)
15. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
16. base:::withOneRestart(expr, restarts[[1L]])
17. base:::doWithOneRestart(return(expr), restart)
── 3. Error: Test get_dimred (@test-wrap_add_dimred.R#278) ────────────────────
there is no package called 'dyndimred'
Backtrace:
1. dynwrap::get_dimred(wr_withdimred, dimred = dyndimred::dimred_pca)
2. dyndimred::dimred_pca
3. base::getExportedValue(pkg, name)
4. base::asNamespace(ns)
5. base::getNamespace(ns)
6. base::loadNamespace(name)
7. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
8. base:::withOneRestart(expr, restarts[[1L]])
9. base:::doWithOneRestart(return(expr), restart)
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 918 | SKIPPED: 1 | WARNINGS: 0 | FAILED: 3 ]
1. Error: (unknown) (@test-method_infer_trajectory.R#3)
2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_dimred.R#110)
3. Error: Test get_dimred (@test-wrap_add_dimred.R#278)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [121s/132s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(dynwrap)
>
> test_check("dynwrap")
── 1. Error: (unknown) (@test-method_infer_trajectory.R#3) ────────────────────
there is no package called 'dyndimred'
Backtrace:
1. base::source(...)
27. dyndimred::list_dimred_methods
28. base::getExportedValue(pkg, name)
29. base::asNamespace(ns)
30. base::getNamespace(ns)
31. base::loadNamespace(name)
32. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
33. base:::withOneRestart(expr, restarts[[1L]])
34. base:::doWithOneRestart(return(expr), restart)
── 2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_
there is no package called 'dyndimred'
Backtrace:
9. dynwrap::add_dimred(., dimred = dyndimred::dimred_pca)
11. base::getExportedValue(pkg, name)
12. base::asNamespace(ns)
13. base::getNamespace(ns)
14. base::loadNamespace(name)
15. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
16. base:::withOneRestart(expr, restarts[[1L]])
17. base:::doWithOneRestart(return(expr), restart)
── 3. Error: Test get_dimred (@test-wrap_add_dimred.R#278) ────────────────────
there is no package called 'dyndimred'
Backtrace:
1. dynwrap::get_dimred(wr_withdimred, dimred = dyndimred::dimred_pca)
2. dyndimred::dimred_pca
3. base::getExportedValue(pkg, name)
4. base::asNamespace(ns)
5. base::getNamespace(ns)
6. base::loadNamespace(name)
7. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
8. base:::withOneRestart(expr, restarts[[1L]])
9. base:::doWithOneRestart(return(expr), restart)
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 918 | SKIPPED: 1 | WARNINGS: 0 | FAILED: 3 ]
1. Error: (unknown) (@test-method_infer_trajectory.R#3)
2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_dimred.R#110)
3. Error: Test get_dimred (@test-wrap_add_dimred.R#278)
Error: testthat unit tests failed
Execution halted
Flavor: r-patched-linux-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [201s/190s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(dynwrap)
>
> test_check("dynwrap")
── 1. Error: (unknown) (@test-method_infer_trajectory.R#3) ────────────────────
there is no package called 'dyndimred'
Backtrace:
1. base::source(...)
27. dyndimred::list_dimred_methods
28. base::getExportedValue(pkg, name)
29. base::asNamespace(ns)
30. base::getNamespace(ns)
31. base::loadNamespace(name)
32. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
33. base:::withOneRestart(expr, restarts[[1L]])
34. base:::doWithOneRestart(return(expr), restart)
── 2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_
there is no package called 'dyndimred'
Backtrace:
9. dynwrap::add_dimred(., dimred = dyndimred::dimred_pca)
11. base::getExportedValue(pkg, name)
12. base::asNamespace(ns)
13. base::getNamespace(ns)
14. base::loadNamespace(name)
15. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
16. base:::withOneRestart(expr, restarts[[1L]])
17. base:::doWithOneRestart(return(expr), restart)
── 3. Error: Test get_dimred (@test-wrap_add_dimred.R#278) ────────────────────
there is no package called 'dyndimred'
Backtrace:
1. dynwrap::get_dimred(wr_withdimred, dimred = dyndimred::dimred_pca)
2. dyndimred::dimred_pca
3. base::getExportedValue(pkg, name)
4. base::asNamespace(ns)
5. base::getNamespace(ns)
6. base::loadNamespace(name)
7. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
8. base:::withOneRestart(expr, restarts[[1L]])
9. base:::doWithOneRestart(return(expr), restart)
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 918 | SKIPPED: 1 | WARNINGS: 0 | FAILED: 3 ]
1. Error: (unknown) (@test-method_infer_trajectory.R#3)
2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_dimred.R#110)
3. Error: Test get_dimred (@test-wrap_add_dimred.R#278)
Error: testthat unit tests failed
Execution halted
Flavor: r-patched-solaris-x86
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [122s/132s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(dynwrap)
>
> test_check("dynwrap")
── 1. Error: (unknown) (@test-method_infer_trajectory.R#3) ────────────────────
there is no package called 'dyndimred'
Backtrace:
1. base::source(...)
27. dyndimred::list_dimred_methods
28. base::getExportedValue(pkg, name)
29. base::asNamespace(ns)
30. base::getNamespace(ns)
31. base::loadNamespace(name)
32. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
33. base:::withOneRestart(expr, restarts[[1L]])
34. base:::doWithOneRestart(return(expr), restart)
── 2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_
there is no package called 'dyndimred'
Backtrace:
9. dynwrap::add_dimred(., dimred = dyndimred::dimred_pca)
11. base::getExportedValue(pkg, name)
12. base::asNamespace(ns)
13. base::getNamespace(ns)
14. base::loadNamespace(name)
15. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
16. base:::withOneRestart(expr, restarts[[1L]])
17. base:::doWithOneRestart(return(expr), restart)
── 3. Error: Test get_dimred (@test-wrap_add_dimred.R#278) ────────────────────
there is no package called 'dyndimred'
Backtrace:
1. dynwrap::get_dimred(wr_withdimred, dimred = dyndimred::dimred_pca)
2. dyndimred::dimred_pca
3. base::getExportedValue(pkg, name)
4. base::asNamespace(ns)
5. base::getNamespace(ns)
6. base::loadNamespace(name)
7. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
8. base:::withOneRestart(expr, restarts[[1L]])
9. base:::doWithOneRestart(return(expr), restart)
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 918 | SKIPPED: 1 | WARNINGS: 0 | FAILED: 3 ]
1. Error: (unknown) (@test-method_infer_trajectory.R#3)
2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_dimred.R#110)
3. Error: Test get_dimred (@test-wrap_add_dimred.R#278)
Error: testthat unit tests failed
Execution halted
Flavor: r-release-linux-x86_64
Version: 1.1.4
Check: Rd cross-references
Result: WARN
Unknown package ‘dyndimred’ in Rd xrefs
Flavor: r-release-osx-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/84s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
4. base::asNamespace(ns)
5. base::getNamespace(ns)
6. base::loadNamespace(name)
7. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
8. base:::withOneRestart(expr, restarts[[1L]])
9. base:::doWithOneRestart(return(expr), restart)
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 918 | SKIPPED: 1 | WARNINGS: 0 | FAILED: 3 ]
1. Error: (unknown) (@test-method_infer_trajectory.R#3)
2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_dimred.R#110)
3. Error: Test get_dimred (@test-wrap_add_dimred.R#278)
Error: testthat unit tests failed
Execution halted
Flavor: r-release-osx-x86_64