CRAN Package Check Results for Package dynwrap

Last updated on 2020-03-05 05:47:45 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.1.4 16.65 285.79 302.44 ERROR
r-devel-linux-x86_64-debian-gcc 1.1.4 15.60 212.90 228.50 ERROR
r-devel-linux-x86_64-fedora-clang 1.1.4 358.45 ERROR
r-devel-linux-x86_64-fedora-gcc 1.1.4 336.92 ERROR
r-devel-windows-ix86+x86_64 1.1.4 56.00 476.00 532.00 OK
r-devel-windows-ix86+x86_64-gcc8 1.1.4 36.00 344.00 380.00 OK
r-patched-linux-x86_64 1.1.4 16.00 246.36 262.36 ERROR
r-patched-solaris-x86 1.1.4 459.90 ERROR
r-release-linux-x86_64 1.1.4 13.82 248.56 262.38 ERROR
r-release-windows-ix86+x86_64 1.1.4 32.00 307.00 339.00 OK
r-release-osx-x86_64 1.1.4 ERROR
r-oldrel-windows-ix86+x86_64 1.1.4 21.00 343.00 364.00 OK
r-oldrel-osx-x86_64 1.1.4 NOTE

Check Details

Version: 1.1.4
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: 'dyndimred'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-osx-x86_64

Version: 1.1.4
Check: Rd cross-references
Result: NOTE
    Unknown package 'dyndimred' in Rd xrefs
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64

Version: 1.1.4
Check: examples
Result: ERROR
    Running examples in 'dynwrap-Ex.R' failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: add_dimred
    > ### Title: Add or create a dimensionality reduction
    > ### Aliases: add_dimred is_wrapper_with_dimred get_dimred
    > ### Keywords: adapt_trajectory
    >
    > ### ** Examples
    >
    > dataset <- example_dataset
    > dataset <- add_dimred(
    + dataset,
    + dyndimred::dimred_landmark_mds
    + )
    Error in loadNamespace(name) : there is no package called 'dyndimred'
    Calls: add_dimred ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.1.4
Check: tests
Result: ERROR
     Running 'testthat.R' [144s/154s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(dynwrap)
     >
     > test_check("dynwrap")
     -- 1. Error: (unknown) (@test-method_infer_trajectory.R#3) --------------------
     there is no package called 'dyndimred'
     Backtrace:
     1. base::source(...)
     27. dyndimred::list_dimred_methods
     28. base::getExportedValue(pkg, name)
     29. base::asNamespace(ns)
     30. base::getNamespace(ns)
     31. base::loadNamespace(name)
     32. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
     33. base:::withOneRestart(expr, restarts[[1L]])
     34. base:::doWithOneRestart(return(expr), restart)
    
     -- 2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_
     there is no package called 'dyndimred'
     Backtrace:
     9. dynwrap::add_dimred(., dimred = dyndimred::dimred_pca)
     11. base::getExportedValue(pkg, name)
     12. base::asNamespace(ns)
     13. base::getNamespace(ns)
     14. base::loadNamespace(name)
     15. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
     16. base:::withOneRestart(expr, restarts[[1L]])
     17. base:::doWithOneRestart(return(expr), restart)
    
     -- 3. Error: Test get_dimred (@test-wrap_add_dimred.R#278) --------------------
     there is no package called 'dyndimred'
     Backtrace:
     1. dynwrap::get_dimred(wr_withdimred, dimred = dyndimred::dimred_pca)
     2. dyndimred::dimred_pca
     3. base::getExportedValue(pkg, name)
     4. base::asNamespace(ns)
     5. base::getNamespace(ns)
     6. base::loadNamespace(name)
     7. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
     8. base:::withOneRestart(expr, restarts[[1L]])
     9. base:::doWithOneRestart(return(expr), restart)
    
     == testthat results ===========================================================
     [ OK: 918 | SKIPPED: 1 | WARNINGS: 0 | FAILED: 3 ]
     1. Error: (unknown) (@test-method_infer_trajectory.R#3)
     2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_dimred.R#110)
     3. Error: Test get_dimred (@test-wrap_add_dimred.R#278)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.1.4
Check: tests
Result: ERROR
     Running ‘testthat.R’ [104s/151s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(dynwrap)
     >
     > test_check("dynwrap")
     ── 1. Error: (unknown) (@test-method_infer_trajectory.R#3) ────────────────────
     there is no package called 'dyndimred'
     Backtrace:
     1. base::source(...)
     27. dyndimred::list_dimred_methods
     28. base::getExportedValue(pkg, name)
     29. base::asNamespace(ns)
     30. base::getNamespace(ns)
     31. base::loadNamespace(name)
     32. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
     33. base:::withOneRestart(expr, restarts[[1L]])
     34. base:::doWithOneRestart(return(expr), restart)
    
     ── 2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_
     there is no package called 'dyndimred'
     Backtrace:
     9. dynwrap::add_dimred(., dimred = dyndimred::dimred_pca)
     11. base::getExportedValue(pkg, name)
     12. base::asNamespace(ns)
     13. base::getNamespace(ns)
     14. base::loadNamespace(name)
     15. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
     16. base:::withOneRestart(expr, restarts[[1L]])
     17. base:::doWithOneRestart(return(expr), restart)
    
     ── 3. Error: Test get_dimred (@test-wrap_add_dimred.R#278) ────────────────────
     there is no package called 'dyndimred'
     Backtrace:
     1. dynwrap::get_dimred(wr_withdimred, dimred = dyndimred::dimred_pca)
     2. dyndimred::dimred_pca
     3. base::getExportedValue(pkg, name)
     4. base::asNamespace(ns)
     5. base::getNamespace(ns)
     6. base::loadNamespace(name)
     7. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
     8. base:::withOneRestart(expr, restarts[[1L]])
     9. base:::doWithOneRestart(return(expr), restart)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 918 | SKIPPED: 1 | WARNINGS: 0 | FAILED: 3 ]
     1. Error: (unknown) (@test-method_infer_trajectory.R#3)
     2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_dimred.R#110)
     3. Error: Test get_dimred (@test-wrap_add_dimred.R#278)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 1.1.4
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘dyndimred’
    
    Imports includes 22 non-default packages.
    Importing from so many packages makes the package vulnerable to any of
    them becoming unavailable. Move as many as possible to Suggests and
    use conditionally.
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.1.4
Check: dependencies in R code
Result: NOTE
    Namespaces in Imports field not imported from:
     ‘hdf5r’ ‘jsonlite’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 1.1.4
Check: examples
Result: ERROR
    Running examples in ‘dynwrap-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: add_dimred
    > ### Title: Add or create a dimensionality reduction
    > ### Aliases: add_dimred is_wrapper_with_dimred get_dimred
    > ### Keywords: adapt_trajectory
    >
    > ### ** Examples
    >
    > dataset <- example_dataset
    > dataset <- add_dimred(
    + dataset,
    + dyndimred::dimred_landmark_mds
    + )
    Error in loadNamespace(name) : there is no package called ‘dyndimred’
    Calls: add_dimred ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-osx-x86_64

Version: 1.1.4
Check: tests
Result: ERROR
     Running ‘testthat.R’ [168s/217s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(dynwrap)
     >
     > test_check("dynwrap")
     ── 1. Error: (unknown) (@test-method_infer_trajectory.R#3) ────────────────────
     there is no package called 'dyndimred'
     Backtrace:
     1. base::source(...)
     27. dyndimred::list_dimred_methods
     28. base::getExportedValue(pkg, name)
     29. base::asNamespace(ns)
     30. base::getNamespace(ns)
     31. base::loadNamespace(name)
     32. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
     33. base:::withOneRestart(expr, restarts[[1L]])
     34. base:::doWithOneRestart(return(expr), restart)
    
     ── 2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_
     there is no package called 'dyndimred'
     Backtrace:
     9. dynwrap::add_dimred(., dimred = dyndimred::dimred_pca)
     11. base::getExportedValue(pkg, name)
     12. base::asNamespace(ns)
     13. base::getNamespace(ns)
     14. base::loadNamespace(name)
     15. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
     16. base:::withOneRestart(expr, restarts[[1L]])
     17. base:::doWithOneRestart(return(expr), restart)
    
     ── 3. Error: Test get_dimred (@test-wrap_add_dimred.R#278) ────────────────────
     there is no package called 'dyndimred'
     Backtrace:
     1. dynwrap::get_dimred(wr_withdimred, dimred = dyndimred::dimred_pca)
     2. dyndimred::dimred_pca
     3. base::getExportedValue(pkg, name)
     4. base::asNamespace(ns)
     5. base::getNamespace(ns)
     6. base::loadNamespace(name)
     7. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
     8. base:::withOneRestart(expr, restarts[[1L]])
     9. base:::doWithOneRestart(return(expr), restart)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 918 | SKIPPED: 1 | WARNINGS: 0 | FAILED: 3 ]
     1. Error: (unknown) (@test-method_infer_trajectory.R#3)
     2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_dimred.R#110)
     3. Error: Test get_dimred (@test-wrap_add_dimred.R#278)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 1.1.4
Check: tests
Result: ERROR
     Running ‘testthat.R’ [154s/172s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(dynwrap)
     >
     > test_check("dynwrap")
     ── 1. Error: (unknown) (@test-method_infer_trajectory.R#3) ────────────────────
     there is no package called 'dyndimred'
     Backtrace:
     1. base::source(...)
     27. dyndimred::list_dimred_methods
     28. base::getExportedValue(pkg, name)
     29. base::asNamespace(ns)
     30. base::getNamespace(ns)
     31. base::loadNamespace(name)
     32. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
     33. base:::withOneRestart(expr, restarts[[1L]])
     34. base:::doWithOneRestart(return(expr), restart)
    
     ── 2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_
     there is no package called 'dyndimred'
     Backtrace:
     9. dynwrap::add_dimred(., dimred = dyndimred::dimred_pca)
     11. base::getExportedValue(pkg, name)
     12. base::asNamespace(ns)
     13. base::getNamespace(ns)
     14. base::loadNamespace(name)
     15. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
     16. base:::withOneRestart(expr, restarts[[1L]])
     17. base:::doWithOneRestart(return(expr), restart)
    
     ── 3. Error: Test get_dimred (@test-wrap_add_dimred.R#278) ────────────────────
     there is no package called 'dyndimred'
     Backtrace:
     1. dynwrap::get_dimred(wr_withdimred, dimred = dyndimred::dimred_pca)
     2. dyndimred::dimred_pca
     3. base::getExportedValue(pkg, name)
     4. base::asNamespace(ns)
     5. base::getNamespace(ns)
     6. base::loadNamespace(name)
     7. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
     8. base:::withOneRestart(expr, restarts[[1L]])
     9. base:::doWithOneRestart(return(expr), restart)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 918 | SKIPPED: 1 | WARNINGS: 0 | FAILED: 3 ]
     1. Error: (unknown) (@test-method_infer_trajectory.R#3)
     2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_dimred.R#110)
     3. Error: Test get_dimred (@test-wrap_add_dimred.R#278)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 1.1.4
Check: tests
Result: ERROR
     Running ‘testthat.R’ [121s/132s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(dynwrap)
     >
     > test_check("dynwrap")
     ── 1. Error: (unknown) (@test-method_infer_trajectory.R#3) ────────────────────
     there is no package called 'dyndimred'
     Backtrace:
     1. base::source(...)
     27. dyndimred::list_dimred_methods
     28. base::getExportedValue(pkg, name)
     29. base::asNamespace(ns)
     30. base::getNamespace(ns)
     31. base::loadNamespace(name)
     32. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
     33. base:::withOneRestart(expr, restarts[[1L]])
     34. base:::doWithOneRestart(return(expr), restart)
    
     ── 2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_
     there is no package called 'dyndimred'
     Backtrace:
     9. dynwrap::add_dimred(., dimred = dyndimred::dimred_pca)
     11. base::getExportedValue(pkg, name)
     12. base::asNamespace(ns)
     13. base::getNamespace(ns)
     14. base::loadNamespace(name)
     15. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
     16. base:::withOneRestart(expr, restarts[[1L]])
     17. base:::doWithOneRestart(return(expr), restart)
    
     ── 3. Error: Test get_dimred (@test-wrap_add_dimred.R#278) ────────────────────
     there is no package called 'dyndimred'
     Backtrace:
     1. dynwrap::get_dimred(wr_withdimred, dimred = dyndimred::dimred_pca)
     2. dyndimred::dimred_pca
     3. base::getExportedValue(pkg, name)
     4. base::asNamespace(ns)
     5. base::getNamespace(ns)
     6. base::loadNamespace(name)
     7. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
     8. base:::withOneRestart(expr, restarts[[1L]])
     9. base:::doWithOneRestart(return(expr), restart)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 918 | SKIPPED: 1 | WARNINGS: 0 | FAILED: 3 ]
     1. Error: (unknown) (@test-method_infer_trajectory.R#3)
     2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_dimred.R#110)
     3. Error: Test get_dimred (@test-wrap_add_dimred.R#278)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-patched-linux-x86_64

Version: 1.1.4
Check: tests
Result: ERROR
     Running ‘testthat.R’ [201s/190s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(dynwrap)
     >
     > test_check("dynwrap")
     ── 1. Error: (unknown) (@test-method_infer_trajectory.R#3) ────────────────────
     there is no package called 'dyndimred'
     Backtrace:
     1. base::source(...)
     27. dyndimred::list_dimred_methods
     28. base::getExportedValue(pkg, name)
     29. base::asNamespace(ns)
     30. base::getNamespace(ns)
     31. base::loadNamespace(name)
     32. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
     33. base:::withOneRestart(expr, restarts[[1L]])
     34. base:::doWithOneRestart(return(expr), restart)
    
     ── 2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_
     there is no package called 'dyndimred'
     Backtrace:
     9. dynwrap::add_dimred(., dimred = dyndimred::dimred_pca)
     11. base::getExportedValue(pkg, name)
     12. base::asNamespace(ns)
     13. base::getNamespace(ns)
     14. base::loadNamespace(name)
     15. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
     16. base:::withOneRestart(expr, restarts[[1L]])
     17. base:::doWithOneRestart(return(expr), restart)
    
     ── 3. Error: Test get_dimred (@test-wrap_add_dimred.R#278) ────────────────────
     there is no package called 'dyndimred'
     Backtrace:
     1. dynwrap::get_dimred(wr_withdimred, dimred = dyndimred::dimred_pca)
     2. dyndimred::dimred_pca
     3. base::getExportedValue(pkg, name)
     4. base::asNamespace(ns)
     5. base::getNamespace(ns)
     6. base::loadNamespace(name)
     7. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
     8. base:::withOneRestart(expr, restarts[[1L]])
     9. base:::doWithOneRestart(return(expr), restart)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 918 | SKIPPED: 1 | WARNINGS: 0 | FAILED: 3 ]
     1. Error: (unknown) (@test-method_infer_trajectory.R#3)
     2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_dimred.R#110)
     3. Error: Test get_dimred (@test-wrap_add_dimred.R#278)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-patched-solaris-x86

Version: 1.1.4
Check: tests
Result: ERROR
     Running ‘testthat.R’ [122s/132s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(dynwrap)
     >
     > test_check("dynwrap")
     ── 1. Error: (unknown) (@test-method_infer_trajectory.R#3) ────────────────────
     there is no package called 'dyndimred'
     Backtrace:
     1. base::source(...)
     27. dyndimred::list_dimred_methods
     28. base::getExportedValue(pkg, name)
     29. base::asNamespace(ns)
     30. base::getNamespace(ns)
     31. base::loadNamespace(name)
     32. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
     33. base:::withOneRestart(expr, restarts[[1L]])
     34. base:::doWithOneRestart(return(expr), restart)
    
     ── 2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_
     there is no package called 'dyndimred'
     Backtrace:
     9. dynwrap::add_dimred(., dimred = dyndimred::dimred_pca)
     11. base::getExportedValue(pkg, name)
     12. base::asNamespace(ns)
     13. base::getNamespace(ns)
     14. base::loadNamespace(name)
     15. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
     16. base:::withOneRestart(expr, restarts[[1L]])
     17. base:::doWithOneRestart(return(expr), restart)
    
     ── 3. Error: Test get_dimred (@test-wrap_add_dimred.R#278) ────────────────────
     there is no package called 'dyndimred'
     Backtrace:
     1. dynwrap::get_dimred(wr_withdimred, dimred = dyndimred::dimred_pca)
     2. dyndimred::dimred_pca
     3. base::getExportedValue(pkg, name)
     4. base::asNamespace(ns)
     5. base::getNamespace(ns)
     6. base::loadNamespace(name)
     7. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
     8. base:::withOneRestart(expr, restarts[[1L]])
     9. base:::doWithOneRestart(return(expr), restart)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 918 | SKIPPED: 1 | WARNINGS: 0 | FAILED: 3 ]
     1. Error: (unknown) (@test-method_infer_trajectory.R#3)
     2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_dimred.R#110)
     3. Error: Test get_dimred (@test-wrap_add_dimred.R#278)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-release-linux-x86_64

Version: 1.1.4
Check: Rd cross-references
Result: WARN
    Unknown package ‘dyndimred’ in Rd xrefs
Flavor: r-release-osx-x86_64

Version: 1.1.4
Check: tests
Result: ERROR
     Running ‘testthat.R’ [85s/84s]
    Running the tests in ‘tests/testthat.R’ failed.
    Last 13 lines of output:
     4. base::asNamespace(ns)
     5. base::getNamespace(ns)
     6. base::loadNamespace(name)
     7. base::withRestarts(stop(cond), retry_loadNamespace = function() NULL)
     8. base:::withOneRestart(expr, restarts[[1L]])
     9. base:::doWithOneRestart(return(expr), restart)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 918 | SKIPPED: 1 | WARNINGS: 0 | FAILED: 3 ]
     1. Error: (unknown) (@test-method_infer_trajectory.R#3)
     2. Error: Testing add_dimred including calculation of dimred (@test-wrap_add_dimred.R#110)
     3. Error: Test get_dimred (@test-wrap_add_dimred.R#278)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-release-osx-x86_64