CRAN Package Check Results for Package bbl

Last updated on 2020-03-07 10:47:32 CET.

Check Details

Version: 0.3.0
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building 'article.Rnw' using Sweave
    Setting levels: control = No, case = Yes
    Loading required package: glmnet
    Loading required package: Matrix
    Loaded glmnet 3.0-2
    
    Setting levels: control = No, case = Yes
    Setting levels: control = No, case = Yes
    Loading required package: Biostrings
    Loading required package: BiocGenerics
    Loading required package: parallel
    
    Attaching package: 'BiocGenerics'
    
    The following objects are masked from 'package:parallel':
    
     clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
     clusterExport, clusterMap, parApply, parCapply, parLapply,
     parLapplyLB, parRapply, parSapply, parSapplyLB
    
    The following object is masked from 'package:Matrix':
    
     which
    
    The following objects are masked from 'package:stats':
    
     IQR, mad, sd, var, xtabs
    
    The following objects are masked from 'package:base':
    
     Filter, Find, Map, Position, Reduce, anyDuplicated,
     append, as.data.frame, basename, cbind, colnames, dirname,
     do.call, duplicated, eval, evalq, get, grep, grepl,
     intersect, is.unsorted, lapply, mapply, match, mget,
     order, paste, pmax, pmax.int, pmin, pmin.int, rank, rbind,
     rownames, sapply, setdiff, sort, table, tapply, union,
     unique, unsplit, which, which.max, which.min
    
    Loading required package: S4Vectors
    Loading required package: stats4
    
    Attaching package: 'S4Vectors'
    
    The following object is masked from 'package:Matrix':
    
     expand
    
    The following object is masked from 'package:base':
    
     expand.grid
    
    Loading required package: IRanges
    Loading required package: XVector
    
    Attaching package: 'Biostrings'
    
    The following object is masked from 'package:base':
    
     strsplit
    
    Error: processing vignette 'article.Rnw' failed with diagnostics:
    Running 'texi2dvi' on 'article.tex' failed.
    LaTeX errors:
    ! Package inputenc Error: Unicode character Â<c2><80> (U+0080)
    (inputenc) not set up for use with LaTeX.
    
    See the inputenc package documentation for explanation.
    Type H <return> for immediate help.
    --- failed re-building 'article.Rnw'
    
    SUMMARY: processing the following file failed:
     'article.Rnw'
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.3.0
Check: installed package size
Result: NOTE
     installed size is 5.1Mb
     sub-directories of 1Mb or more:
     extdata 2.3Mb
     libs 2.3Mb
Flavors: r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8, r-release-windows-ix86+x86_64, r-release-osx-x86_64

Version: 0.3.0
Check: re-building of vignette outputs
Result: NOTE
    Error(s) in re-building vignettes:
    --- re-building ‘article.Rnw’ using Sweave
    Setting levels: control = No, case = Yes
    Loading required package: glmnet
    Loading required package: Matrix
    Loaded glmnet 3.0-2
    
    Setting levels: control = No, case = Yes
    Setting levels: control = No, case = Yes
    Loading required package: Biostrings
    Loading required package: BiocGenerics
    Loading required package: parallel
    
    Attaching package: 'BiocGenerics'
    
    The following objects are masked from 'package:parallel':
    
     clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
     clusterExport, clusterMap, parApply, parCapply, parLapply,
     parLapplyLB, parRapply, parSapply, parSapplyLB
    
    The following object is masked from 'package:Matrix':
    
     which
    
    The following objects are masked from 'package:stats':
    
     IQR, mad, sd, var, xtabs
    
    The following objects are masked from 'package:base':
    
     Filter, Find, Map, Position, Reduce, anyDuplicated,
     append, as.data.frame, basename, cbind, colnames, dirname,
     do.call, duplicated, eval, evalq, get, grep, grepl,
     intersect, is.unsorted, lapply, mapply, match, mget,
     order, paste, pmax, pmax.int, pmin, pmin.int, rank, rbind,
     rownames, sapply, setdiff, sort, table, tapply, union,
     unique, unsplit, which, which.max, which.min
    
    Loading required package: S4Vectors
    Warning: package 'S4Vectors' was built under R version 3.6.1
    Loading required package: stats4
    
    Attaching package: 'S4Vectors'
    
    The following object is masked from 'package:Matrix':
    
     expand
    
    The following object is masked from 'package:base':
    
     expand.grid
    
    Loading required package: IRanges
    Warning: package 'IRanges' was built under R version 3.6.1
    Loading required package: XVector
    
    Attaching package: 'Biostrings'
    
    The following object is masked from 'package:base':
    
     strsplit
    
    Error: processing vignette 'article.Rnw' failed with diagnostics:
    Running 'texi2dvi' on 'article.tex' failed.
    LaTeX errors:
    !pdfTeX error: pdflatex (file bbm10): Font bbm10 at 657 not found
     ==> Fatal error occurred, no output PDF file produced!
    --- failed re-building 'article.Rnw'
    
    SUMMARY: processing the following file failed:
     'article.Rnw'
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-release-osx-x86_64

Version: 0.3.0
Check: whether package can be installed
Result: ERROR
    Installation failed.
Flavor: r-oldrel-osx-x86_64