CRAN Package Check Results for Package zenplots

Last updated on 2020-03-15 08:47:51 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.0 14.68 140.53 155.21 WARN
r-devel-linux-x86_64-debian-gcc 1.0.0 11.18 113.74 124.92 WARN
r-devel-linux-x86_64-fedora-clang 1.0.0 242.91 WARN
r-devel-linux-x86_64-fedora-gcc 1.0.0 192.56 WARN
r-devel-windows-ix86+x86_64 1.0.0 24.00 351.00 375.00 ERROR
r-devel-windows-ix86+x86_64-gcc8 1.0.0 22.00 206.00 228.00 OK
r-patched-linux-x86_64 1.0.0 12.36 100.78 113.14 WARN
r-patched-solaris-x86 1.0.0 303.80 OK
r-release-linux-x86_64 1.0.0 12.64 101.80 114.44 WARN
r-release-windows-ix86+x86_64 1.0.0 38.00 255.00 293.00 OK
r-release-osx-x86_64 1.0.0 ERROR
r-oldrel-windows-ix86+x86_64 1.0.0 15.00 189.00 204.00 OK
r-oldrel-osx-x86_64 1.0.0 OK

Check Details

Version: 1.0.0
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: 'qqtest'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.0.0
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building 'intro.Rmd' using rmarkdown
    Loading required package: TSP
    Loading required package: gtools
    Loading required package: graph
    Loading required package: BiocGenerics
    Loading required package: parallel
    
    Attaching package: 'BiocGenerics'
    
    The following objects are masked from 'package:parallel':
    
     clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
     clusterExport, clusterMap, parApply, parCapply, parLapply,
     parLapplyLB, parRapply, parSapply, parSapplyLB
    
    The following objects are masked from 'package:stats':
    
     IQR, mad, sd, var, xtabs
    
    The following objects are masked from 'package:base':
    
     Filter, Find, Map, Position, Reduce, anyDuplicated, append,
     as.data.frame, basename, cbind, colnames, dirname, do.call,
     duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
     lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
     pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
     tapply, union, unique, unsplit, which, which.max, which.min
    
    Loading required package: grid
    Quitting from lines 676-697 (intro.Rmd)
    Error: processing vignette 'intro.Rmd' failed with diagnostics:
    there is no package called 'qqtest'
    --- failed re-building 'intro.Rmd'
    
    --- re-building 'selected_features.Rmd' using rmarkdown
    Loading required package: TSP
    Loading required package: gtools
    Loading required package: graph
    Loading required package: BiocGenerics
    Loading required package: parallel
    
    Attaching package: 'BiocGenerics'
    
    The following objects are masked from 'package:parallel':
    
     clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
     clusterExport, clusterMap, parApply, parCapply, parLapply,
     parLapplyLB, parRapply, parSapply, parSapplyLB
    
    The following objects are masked from 'package:stats':
    
     IQR, mad, sd, var, xtabs
    
    The following objects are masked from 'package:base':
    
     Filter, Find, Map, Position, Reduce, anyDuplicated, append,
     as.data.frame, basename, cbind, colnames, dirname, do.call,
     duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
     lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
     pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
     tapply, union, unique, unsplit, which, which.max, which.min
    
    Loading required package: rJava
    --- finished re-building 'selected_features.Rmd'
    
    SUMMARY: processing the following file failed:
     'intro.Rmd'
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.0.0
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘intro.Rmd’ using rmarkdown
    Loading required package: TSP
    Loading required package: gtools
    Loading required package: graph
    Loading required package: BiocGenerics
    Loading required package: parallel
    
    Attaching package: 'BiocGenerics'
    
    The following objects are masked from 'package:parallel':
    
     clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
     clusterExport, clusterMap, parApply, parCapply, parLapply,
     parLapplyLB, parRapply, parSapply, parSapplyLB
    
    The following objects are masked from 'package:stats':
    
     IQR, mad, sd, var, xtabs
    
    The following objects are masked from 'package:base':
    
     Filter, Find, Map, Position, Reduce, anyDuplicated, append,
     as.data.frame, basename, cbind, colnames, dirname, do.call,
     duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
     lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
     pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
     tapply, union, unique, unsplit, which, which.max, which.min
    
    Loading required package: grid
    Quitting from lines 676-697 (intro.Rmd)
    Error: processing vignette 'intro.Rmd' failed with diagnostics:
    there is no package called 'qqtest'
    --- failed re-building ‘intro.Rmd’
    
    --- re-building ‘selected_features.Rmd’ using rmarkdown
    Loading required package: TSP
    Loading required package: gtools
    Loading required package: graph
    Loading required package: BiocGenerics
    Loading required package: parallel
    
    Attaching package: 'BiocGenerics'
    
    The following objects are masked from 'package:parallel':
    
     clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
     clusterExport, clusterMap, parApply, parCapply, parLapply,
     parLapplyLB, parRapply, parSapply, parSapplyLB
    
    The following objects are masked from 'package:stats':
    
     IQR, mad, sd, var, xtabs
    
    The following objects are masked from 'package:base':
    
     Filter, Find, Map, Position, Reduce, anyDuplicated, append,
     as.data.frame, basename, cbind, colnames, dirname, do.call,
     duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
     lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
     pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
     tapply, union, unique, unsplit, which, which.max, which.min
    
    Loading required package: rJava
    --- finished re-building ‘selected_features.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘intro.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.0.0
Check: running examples for arch ‘i386’
Result: ERROR
    Running examples in 'zenplots-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: graph_pairs
    > ### Title: Turn pairs or paths into a graph
    > ### Aliases: graph_pairs
    >
    > ### ** Examples
    >
    > ## Get some pairs
    > pairs <- matrix(c(1,2, 5,1, 3,4, 2,3, 4,2), ncol = 2, byrow = TRUE)
    > g <- graph_pairs(pairs)
    > ## which can be displayed using plot(g)
    > ## if the graph package is installed.
    > library(graph)
    Loading required package: BiocGenerics
    Loading required package: parallel
    
    Attaching package: 'BiocGenerics'
    
    The following objects are masked from 'package:parallel':
    
     clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
     clusterExport, clusterMap, parApply, parCapply, parLapply,
     parLapplyLB, parRapply, parSapply, parSapplyLB
    
    The following objects are masked from 'package:stats':
    
     IQR, mad, sd, var, xtabs
    
    The following objects are masked from 'package:base':
    
     Filter, Find, Map, Position, Reduce, anyDuplicated, append,
     as.data.frame, basename, cbind, colnames, dirname, do.call,
     duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
     lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
     pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
     tapply, union, unique, unsplit, which, which.max, which.min
    
    > plot(g)
    Error in as.double(y) :
     cannot coerce type 'S4' to vector of type 'double'
    Calls: plot -> plot -> plot.default -> xy.coords
    Execution halted
Flavor: r-devel-windows-ix86+x86_64

Version: 1.0.0
Check: running examples for arch ‘x64’
Result: ERROR
    Running examples in 'zenplots-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: graph_pairs
    > ### Title: Turn pairs or paths into a graph
    > ### Aliases: graph_pairs
    >
    > ### ** Examples
    >
    > ## Get some pairs
    > pairs <- matrix(c(1,2, 5,1, 3,4, 2,3, 4,2), ncol = 2, byrow = TRUE)
    > g <- graph_pairs(pairs)
    > ## which can be displayed using plot(g)
    > ## if the graph package is installed.
    > library(graph)
    Loading required package: BiocGenerics
    Loading required package: parallel
    
    Attaching package: 'BiocGenerics'
    
    The following objects are masked from 'package:parallel':
    
     clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
     clusterExport, clusterMap, parApply, parCapply, parLapply,
     parLapplyLB, parRapply, parSapply, parSapplyLB
    
    The following objects are masked from 'package:stats':
    
     IQR, mad, sd, var, xtabs
    
    The following objects are masked from 'package:base':
    
     Filter, Find, Map, Position, Reduce, anyDuplicated, append,
     as.data.frame, basename, cbind, colnames, dirname, do.call,
     duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
     lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
     pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
     tapply, union, unique, unsplit, which, which.max, which.min
    
    > plot(g)
    Error in as.double(y) :
     cannot coerce type 'S4' to vector of type 'double'
    Calls: plot -> plot -> plot.default -> xy.coords
    Execution halted
Flavor: r-devel-windows-ix86+x86_64

Version: 1.0.0
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building 'intro.Rmd' using rmarkdown
    Loading required package: TSP
    Loading required package: gtools
    Loading required package: graph
    Loading required package: BiocGenerics
    Loading required package: parallel
    
    Attaching package: 'BiocGenerics'
    
    The following objects are masked from 'package:parallel':
    
     clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
     clusterExport, clusterMap, parApply, parCapply, parLapply,
     parLapplyLB, parRapply, parSapply, parSapplyLB
    
    The following objects are masked from 'package:stats':
    
     IQR, mad, sd, var, xtabs
    
    The following objects are masked from 'package:base':
    
     Filter, Find, Map, Position, Reduce, anyDuplicated, append,
     as.data.frame, basename, cbind, colnames, dirname, do.call,
     duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
     lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
     pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
     tapply, union, unique, unsplit, which, which.max, which.min
    
    Loading required package: grid
    Warning: multiple methods tables found for 'plot'
    Quitting from lines 98-102 (intro.Rmd)
    Error: processing vignette 'intro.Rmd' failed with diagnostics:
    cannot coerce type 'S4' to vector of type 'double'
    --- failed re-building 'intro.Rmd'
    
    --- re-building 'selected_features.Rmd' using rmarkdown
    Loading required package: TSP
    Loading required package: gtools
    Loading required package: graph
    Loading required package: BiocGenerics
    Loading required package: parallel
    
    Attaching package: 'BiocGenerics'
    
    The following objects are masked from 'package:parallel':
    
     clusterApply, clusterApplyLB, clusterCall, clusterEvalQ,
     clusterExport, clusterMap, parApply, parCapply, parLapply,
     parLapplyLB, parRapply, parSapply, parSapplyLB
    
    The following objects are masked from 'package:stats':
    
     IQR, mad, sd, var, xtabs
    
    The following objects are masked from 'package:base':
    
     Filter, Find, Map, Position, Reduce, anyDuplicated, append,
     as.data.frame, basename, cbind, colnames, dirname, do.call,
     duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
     lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
     pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
     tapply, union, unique, unsplit, which, which.max, which.min
    
    Loading required package: rJava
    Quitting from lines 249-251 (selected_features.Rmd)
    Error: processing vignette 'selected_features.Rmd' failed with diagnostics:
    cannot coerce type 'S4' to vector of type 'double'
    --- failed re-building 'selected_features.Rmd'
    
    SUMMARY: processing the following files failed:
     'intro.Rmd' 'selected_features.Rmd'
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-devel-windows-ix86+x86_64

Version: 1.0.0
Check: whether package can be installed
Result: ERROR
    Installation failed.
Flavor: r-release-osx-x86_64