CRAN Package Check Results for Package BayesPostEst

Last updated on 2020-04-09 09:48:03 CEST.

Flavor	Version	T_install	T_check	T_total	Status
r-devel-linux-x86_64-debian-clang	0.2.0	8.13	318.33	326.46	ERROR
r-devel-linux-x86_64-debian-gcc	0.2.0	7.38	241.91	249.29	ERROR
r-devel-linux-x86_64-fedora-clang	0.2.0			387.94	ERROR
r-devel-linux-x86_64-fedora-gcc	0.2.0			444.04	ERROR
r-devel-windows-ix86+x86_64	0.2.0	21.00	300.00	321.00	ERROR
r-devel-windows-ix86+x86_64-gcc8	0.2.0	14.00	306.00	320.00	ERROR
r-patched-linux-x86_64	0.2.0	8.82	308.95	317.77	ERROR
r-patched-osx-x86_64	0.2.0				ERROR
r-patched-solaris-x86	0.2.0			483.70	ERROR
r-release-linux-x86_64	0.2.0	6.90	297.78	304.68	OK
r-release-windows-ix86+x86_64	0.2.0	41.00	379.00	420.00	OK
r-release-osx-x86_64	0.2.0				NOTE
r-oldrel-windows-ix86+x86_64	0.2.0	16.00	396.00	412.00	OK
r-oldrel-osx-x86_64	0.2.0				WARN

Check Details

Version: 0.2.0
Check: tests
Result: ERROR
     Running 'testthat.R' [14s/16s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(BayesPostEst)
     >
     > test_check("BayesPostEst")
     -- 1. Failure: pars subsetting works (@test_mcmcTab.R#61) ---------------------
     object$Variable not equal to factor(c(sprintf("b[%s]", 1:3))).
     Types not compatible: character is not integer

     -- 2. Failure: pars subsetting works (@test_mcmcTab.R#83) ---------------------
     object$Variable not equal to factor(c(sprintf("b[%s]", 1:2))).
     Types not compatible: character is not integer

     == testthat results ===========================================================
     [ OK: 52 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 2 ]
     1. Failure: pars subsetting works (@test_mcmcTab.R#61)
     2. Failure: pars subsetting works (@test_mcmcTab.R#83)

     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.2.0
Check: tests
Result: ERROR
     Running ‘testthat.R’ [10s/15s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(BayesPostEst)
     >
     > test_check("BayesPostEst")
     ── 1. Failure: pars subsetting works (@test_mcmcTab.R#61) ─────────────────────
     object$Variable not equal to factor(c(sprintf("b[%s]", 1:3))).
     Types not compatible: character is not integer

     ── 2. Failure: pars subsetting works (@test_mcmcTab.R#83) ─────────────────────
     object$Variable not equal to factor(c(sprintf("b[%s]", 1:2))).
     Types not compatible: character is not integer

     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 52 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 2 ]
     1. Failure: pars subsetting works (@test_mcmcTab.R#61)
     2. Failure: pars subsetting works (@test_mcmcTab.R#83)

     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.2.0
Check: dependencies in R code
Result: NOTE
    Namespaces in Imports field not imported from:
     ‘HDInterval’ ‘carData’ ‘runjags’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-osx-x86_64, r-patched-solaris-x86, r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 0.2.0
Check: tests
Result: ERROR
     Running ‘testthat.R’ [17s/19s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(BayesPostEst)
     >
     > test_check("BayesPostEst")
     ── 1. Failure: pars subsetting works (@test_mcmcTab.R#61) ─────────────────────
     object$Variable not equal to factor(c(sprintf("b[%s]", 1:3))).
     Types not compatible: character is not integer

     ── 2. Failure: pars subsetting works (@test_mcmcTab.R#83) ─────────────────────
     object$Variable not equal to factor(c(sprintf("b[%s]", 1:2))).
     Types not compatible: character is not integer

     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 52 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 2 ]
     1. Failure: pars subsetting works (@test_mcmcTab.R#61)
     2. Failure: pars subsetting works (@test_mcmcTab.R#83)

     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.2.0
Check: tests
Result: ERROR
     Running ‘testthat.R’ [18s/50s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(BayesPostEst)
     >
     > test_check("BayesPostEst")
     ── 1. Failure: pars subsetting works (@test_mcmcTab.R#61) ─────────────────────
     object$Variable not equal to factor(c(sprintf("b[%s]", 1:3))).
     Types not compatible: character is not integer

     ── 2. Failure: pars subsetting works (@test_mcmcTab.R#83) ─────────────────────
     object$Variable not equal to factor(c(sprintf("b[%s]", 1:2))).
     Types not compatible: character is not integer

     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 52 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 2 ]
     1. Failure: pars subsetting works (@test_mcmcTab.R#61)
     2. Failure: pars subsetting works (@test_mcmcTab.R#83)

     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 0.2.0
Check: tests
Result: ERROR
     Running 'testthat.R' [15s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(BayesPostEst)
     >
     > test_check("BayesPostEst")
     -- 1. Failure: pars subsetting works (@test_mcmcTab.R#61) ---------------------
     object$Variable not equal to factor(c(sprintf("b[%s]", 1:3))).
     Types not compatible: character is not integer

     -- 2. Failure: pars subsetting works (@test_mcmcTab.R#83) ---------------------
     object$Variable not equal to factor(c(sprintf("b[%s]", 1:2))).
     Types not compatible: character is not integer

     == testthat results ===========================================================
     [ OK: 52 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 2 ]
     1. Failure: pars subsetting works (@test_mcmcTab.R#61)
     2. Failure: pars subsetting works (@test_mcmcTab.R#83)

     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-windows-ix86+x86_64

Version: 0.2.0
Check: tests
Result: ERROR
     Running 'testthat.R' [14s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(BayesPostEst)
     >
     > test_check("BayesPostEst")
     -- 1. Failure: pars subsetting works (@test_mcmcTab.R#61) ---------------------
     object$Variable not equal to factor(c(sprintf("b[%s]", 1:3))).
     Types not compatible: character is not integer

     -- 2. Failure: pars subsetting works (@test_mcmcTab.R#83) ---------------------
     object$Variable not equal to factor(c(sprintf("b[%s]", 1:2))).
     Types not compatible: character is not integer

     == testthat results ===========================================================
     [ OK: 52 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 2 ]
     1. Failure: pars subsetting works (@test_mcmcTab.R#61)
     2. Failure: pars subsetting works (@test_mcmcTab.R#83)

     Error: testthat unit tests failed
     Execution halted
Flavor: r-devel-windows-ix86+x86_64-gcc8

Version: 0.2.0
Check: tests
Result: ERROR
     Running ‘testthat.R’ [13s/15s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(BayesPostEst)
     >
     > test_check("BayesPostEst")
     ── 1. Failure: pars subsetting works (@test_mcmcTab.R#61) ─────────────────────
     object$Variable not equal to factor(c(sprintf("b[%s]", 1:3))).
     Types not compatible: character is not integer

     ── 2. Failure: pars subsetting works (@test_mcmcTab.R#83) ─────────────────────
     object$Variable not equal to factor(c(sprintf("b[%s]", 1:2))).
     Types not compatible: character is not integer

     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 52 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 2 ]
     1. Failure: pars subsetting works (@test_mcmcTab.R#61)
     2. Failure: pars subsetting works (@test_mcmcTab.R#83)

     Error: testthat unit tests failed
     Execution halted
Flavor: r-patched-linux-x86_64

Version: 0.2.0
Check: tests
Result: ERROR
     Running ‘testthat.R’ [7s/11s]
    Running the tests in ‘tests/testthat.R’ failed.
    Last 13 lines of output:
     ── 1. Failure: pars subsetting works (@test_mcmcTab.R#61) ─────────────────────
     object$Variable not equal to factor(c(sprintf("b[%s]", 1:3))).
     Types not compatible: character is not integer

     ── 2. Failure: pars subsetting works (@test_mcmcTab.R#83) ─────────────────────
     object$Variable not equal to factor(c(sprintf("b[%s]", 1:2))).
     Types not compatible: character is not integer

     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 52 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 2 ]
     1. Failure: pars subsetting works (@test_mcmcTab.R#61)
     2. Failure: pars subsetting works (@test_mcmcTab.R#83)

     Error: testthat unit tests failed
     Execution halted
Flavor: r-patched-osx-x86_64

Version: 0.2.0
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘getting_started.Rmd’ using rmarkdown
    Loading required package: rjags
    Loading required package: coda
    Linked to JAGS 4.3.0
    Loaded modules: basemod,bugs

    Attaching package: 'R2jags'

    The following object is masked from 'package:coda':

     traceplot

    module glm loaded
    Loading required package: MASS
    ##
    ## Markov Chain Monte Carlo Package (MCMCpack)
    ## Copyright (C) 2003-2020 Andrew D. Martin, Kevin M. Quinn, and Jong Hee Park
    ##
    ## Support provided by the U.S. National Science Foundation
    ## (Grants SES-0350646 and SES-0350613)
    ##
    Loading required package: StanHeaders
    Loading required package: ggplot2
    rstan (Version 2.19.3, GitRev: 2e1f913d3ca3)
    For execution on a local, multicore CPU with excess RAM we recommend calling
    options(mc.cores = parallel::detectCores()).
    To avoid recompilation of unchanged Stan programs, we recommend calling
    rstan_options(auto_write = TRUE)

    Attaching package: 'rstan'

    The following object is masked from 'package:R2jags':

     traceplot

    The following object is masked from 'package:coda':

     traceplot

    Loading required package: Rcpp
    rstanarm (Version 2.19.3, packaged: 2020-02-11 05:16:41 UTC)
    - Do not expect the default priors to remain the same in future rstanarm versions.
    Thus, R scripts should specify priors explicitly, even if they are just the defaults.
    - For execution on a local, multicore CPU with excess RAM we recommend calling
    options(mc.cores = parallel::detectCores())
    - bayesplot theme set to bayesplot::theme_default()
     * Does _not_ affect other ggplot2 plots
     * See ?bayesplot_theme_set for details on theme setting

    Attaching package: 'rstanarm'

    The following object is masked from 'package:rstan':

     loo

    This table contains an estimate for parameter values outside of the region of
     practical equivalence (ROPE). For this quantity to be meaningful, all parameters
     must be on the same scale (e.g. standardized coefficients or first differences).
    Picking joint bandwidth of 0.00327
    Picking joint bandwidth of 0.00318
    Picking joint bandwidth of 0.0037
    Picking joint bandwidth of 0.0037
    Warning: Removed 1 row(s) containing missing values (geom_path).
    Warning in rm(mod.rds) : object 'mod.rds' not found
    dyld: lazy symbol binding failed: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib

    dyld: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib

    Error: processing vignette 'getting_started.Rmd' failed with diagnostics:
    pandoc document conversion failed with error 6
    --- failed re-building ‘getting_started.Rmd’

    SUMMARY: processing the following file failed:
     ‘getting_started.Rmd’

    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-osx-x86_64

Version: 0.2.0
Check: tests
Result: ERROR
     Running ‘testthat.R’ [19s/20s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(BayesPostEst)
     >
     > test_check("BayesPostEst")
     ── 1. Failure: pars subsetting works (@test_mcmcTab.R#61) ─────────────────────
     object$Variable not equal to factor(c(sprintf("b[%s]", 1:3))).
     Types not compatible: character is not integer

     ── 2. Failure: pars subsetting works (@test_mcmcTab.R#83) ─────────────────────
     object$Variable not equal to factor(c(sprintf("b[%s]", 1:2))).
     Types not compatible: character is not integer

     ══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 52 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 2 ]
     1. Failure: pars subsetting works (@test_mcmcTab.R#61)
     2. Failure: pars subsetting works (@test_mcmcTab.R#83)

     Error: testthat unit tests failed
     Execution halted
Flavor: r-patched-solaris-x86

Version: 0.2.0
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Loading required package: StanHeaders
    Loading required package: ggplot2
    rstan (Version 2.19.2, GitRev: 2e1f913d3ca3)
    For execution on a local, multicore CPU with excess RAM we recommend calling
    options(mc.cores = parallel::detectCores()).
    To avoid recompilation of unchanged Stan programs, we recommend calling
    rstan_options(auto_write = TRUE)

    Attaching package: 'rstan'

    The following object is masked from 'package:R2jags':

     traceplot

    The following object is masked from 'package:coda':

     traceplot

    Quitting from lines 205-211 (getting_started.Rmd)
    Error: processing vignette 'getting_started.Rmd' failed with diagnostics:
    unable to load shared object '/tmp/Rtmp6wMLDg/filee19e339cc254.so':
     dlopen(/tmp/Rtmp6wMLDg/filee19e339cc254.so, 6): Library not loaded: /Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libR.dylib
     Referenced from: /tmp/Rtmp6wMLDg/filee19e339cc254.so
     Reason: Incompatible library version: filee19e339cc254.so requires version 3.6.0 or later, but libR.dylib provides version 3.5.0
    Execution halted
Flavor: r-oldrel-osx-x86_64