Last updated on 2020-04-09 09:48:16 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.4 | 3.60 | 58.02 | 61.62 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.1.4 | 3.43 | 45.89 | 49.32 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.1.4 | 72.24 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 0.1.4 | 81.25 | ERROR | |||
| r-devel-windows-ix86+x86_64 | 0.1.4 | 9.00 | 92.00 | 101.00 | ERROR | |
| r-devel-windows-ix86+x86_64-gcc8 | 0.1.4 | 8.00 | 63.00 | 71.00 | ERROR | |
| r-patched-linux-x86_64 | 0.1.4 | 3.65 | 55.55 | 59.20 | ERROR | |
| r-patched-osx-x86_64 | 0.1.4 | ERROR | ||||
| r-patched-solaris-x86 | 0.1.4 | 101.60 | ERROR | |||
| r-release-linux-x86_64 | 0.1.4 | 2.90 | 73.61 | 76.51 | OK | |
| r-release-windows-ix86+x86_64 | 0.1.4 | 7.00 | 118.00 | 125.00 | OK | |
| r-release-osx-x86_64 | 0.1.4 | NOTE | ||||
| r-oldrel-windows-ix86+x86_64 | 0.1.4 | 7.00 | 87.00 | 94.00 | OK | |
| r-oldrel-osx-x86_64 | 0.1.4 | ERROR |
Version: 0.1.4
Check: examples
Result: ERROR
Running examples in 'mfe-Ex.R' failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: infotheo
> ### Title: Information-theoretic meta-features
> ### Aliases: infotheo infotheo.default infotheo.formula
>
> ### ** Examples
>
> ## Extract all metafeatures
> infotheo(Species ~ ., iris)
Error in `[.data.frame`(x, , j) : undefined columns selected
Calls: infotheo ... concentration.coefficient -> table -> [ -> [.data.frame
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64
Version: 0.1.4
Check: tests
Result: ERROR
Running 'testthat.R' [23s/28s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(mfe)
>
> test_check("mfe")
-- 1. Error: infotheo.result (@test_infotheo.R#5) -----------------------------
undefined columns selected
Backtrace:
1. mfe::infotheo(Species ~ ., iris)
2. mfe:::infotheo.formula(Species ~ ., iris)
3. mfe:::infotheo.default(...)
4. base::sapply(...)
5. base::lapply(X = X, FUN = FUN, ...)
6. mfe:::FUN(X[[i]], ...)
8. mfe:::m.attrConc(...)
9. base::mapply(...)
14. base::`[.data.frame`(x, , j)
-- 2. Error: transform.false.result (@test_infotheo.R#25) ---------------------
undefined columns selected
Backtrace:
1. testthat::expect_named(...)
5. mfe:::infotheo.formula(Species ~ ., data, ls.infotheo()[1:3])
6. mfe:::infotheo.default(...)
7. base::sapply(...)
8. base::lapply(X = X, FUN = FUN, ...)
9. mfe:::FUN(X[[i]], ...)
11. mfe:::m.attrConc(...)
12. base::mapply(...)
17. base::`[.data.frame`(x, , j)
-- 3. Error: multiclass.result (@test_metafeatures.R#6) -----------------------
undefined columns selected
Backtrace:
1. mfe::metafeatures(Species ~ ., iris)
2. mfe:::metafeatures.formula(Species ~ ., iris)
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
-- 4. Error: binary.result (@test_metafeatures.R#18) --------------------------
undefined columns selected
Backtrace:
1. mfe::metafeatures(Species ~ ., iris)
2. mfe:::metafeatures.formula(Species ~ ., iris)
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
-- 5. Error: groups.result (@test_metafeatures.R#27) --------------------------
undefined columns selected
Backtrace:
1. mfe::metafeatures(...)
2. mfe:::metafeatures.formula(...)
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
-- 6. Error: all.result (@test_metafeatures.R#45) -----------------------------
undefined columns selected
Backtrace:
1. mfe::metafeatures(Species ~ ., iris, "all")
2. mfe:::metafeatures.formula(Species ~ ., iris, "all")
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
== testthat results ===========================================================
[ OK: 87 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 6 ]
1. Error: infotheo.result (@test_infotheo.R#5)
2. Error: transform.false.result (@test_infotheo.R#25)
3. Error: multiclass.result (@test_metafeatures.R#6)
4. Error: binary.result (@test_metafeatures.R#18)
5. Error: groups.result (@test_metafeatures.R#27)
6. Error: all.result (@test_metafeatures.R#45)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.1.4
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building 'mfe-vignette.Rmd' using rmarkdown
Quitting from lines 55-66 (mfe-vignette.Rmd)
Error: processing vignette 'mfe-vignette.Rmd' failed with diagnostics:
undefined columns selected
--- failed re-building 'mfe-vignette.Rmd'
SUMMARY: processing the following file failed:
'mfe-vignette.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-patched-osx-x86_64
Version: 0.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [18s/30s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(mfe)
>
> test_check("mfe")
── 1. Error: infotheo.result (@test_infotheo.R#5) ─────────────────────────────
undefined columns selected
Backtrace:
1. mfe::infotheo(Species ~ ., iris)
2. mfe:::infotheo.formula(Species ~ ., iris)
3. mfe:::infotheo.default(...)
4. base::sapply(...)
5. base::lapply(X = X, FUN = FUN, ...)
6. mfe:::FUN(X[[i]], ...)
8. mfe:::m.attrConc(...)
9. base::mapply(...)
14. base::`[.data.frame`(x, , j)
── 2. Error: transform.false.result (@test_infotheo.R#25) ─────────────────────
undefined columns selected
Backtrace:
1. testthat::expect_named(...)
5. mfe:::infotheo.formula(Species ~ ., data, ls.infotheo()[1:3])
6. mfe:::infotheo.default(...)
7. base::sapply(...)
8. base::lapply(X = X, FUN = FUN, ...)
9. mfe:::FUN(X[[i]], ...)
11. mfe:::m.attrConc(...)
12. base::mapply(...)
17. base::`[.data.frame`(x, , j)
── 3. Error: multiclass.result (@test_metafeatures.R#6) ───────────────────────
undefined columns selected
Backtrace:
1. mfe::metafeatures(Species ~ ., iris)
2. mfe:::metafeatures.formula(Species ~ ., iris)
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
── 4. Error: binary.result (@test_metafeatures.R#18) ──────────────────────────
undefined columns selected
Backtrace:
1. mfe::metafeatures(Species ~ ., iris)
2. mfe:::metafeatures.formula(Species ~ ., iris)
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
── 5. Error: groups.result (@test_metafeatures.R#27) ──────────────────────────
undefined columns selected
Backtrace:
1. mfe::metafeatures(...)
2. mfe:::metafeatures.formula(...)
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
── 6. Error: all.result (@test_metafeatures.R#45) ─────────────────────────────
undefined columns selected
Backtrace:
1. mfe::metafeatures(Species ~ ., iris, "all")
2. mfe:::metafeatures.formula(Species ~ ., iris, "all")
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 87 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 6 ]
1. Error: infotheo.result (@test_infotheo.R#5)
2. Error: transform.false.result (@test_infotheo.R#25)
3. Error: multiclass.result (@test_metafeatures.R#6)
4. Error: binary.result (@test_metafeatures.R#18)
5. Error: groups.result (@test_metafeatures.R#27)
6. Error: all.result (@test_metafeatures.R#45)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.1.4
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from: ‘ECoL’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-osx-x86_64, r-patched-solaris-x86, r-release-osx-x86_64
Version: 0.1.4
Check: examples
Result: ERROR
Running examples in ‘mfe-Ex.R’ failed
The error most likely occurred in:
> ### Name: infotheo
> ### Title: Information-theoretic meta-features
> ### Aliases: infotheo infotheo.default infotheo.formula
>
> ### ** Examples
>
> ## Extract all metafeatures
> infotheo(Species ~ ., iris)
Error in `[.data.frame`(x, , j) : undefined columns selected
Calls: infotheo ... concentration.coefficient -> table -> [ -> [.data.frame
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8, r-patched-osx-x86_64, r-patched-solaris-x86
Version: 0.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [26s/32s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(mfe)
>
> test_check("mfe")
── 1. Error: infotheo.result (@test_infotheo.R#5) ─────────────────────────────
undefined columns selected
Backtrace:
1. mfe::infotheo(Species ~ ., iris)
2. mfe:::infotheo.formula(Species ~ ., iris)
3. mfe:::infotheo.default(...)
4. base::sapply(...)
5. base::lapply(X = X, FUN = FUN, ...)
6. mfe:::FUN(X[[i]], ...)
8. mfe:::m.attrConc(...)
9. base::mapply(...)
14. base::`[.data.frame`(x, , j)
── 2. Error: transform.false.result (@test_infotheo.R#25) ─────────────────────
undefined columns selected
Backtrace:
1. testthat::expect_named(...)
5. mfe:::infotheo.formula(Species ~ ., data, ls.infotheo()[1:3])
6. mfe:::infotheo.default(...)
7. base::sapply(...)
8. base::lapply(X = X, FUN = FUN, ...)
9. mfe:::FUN(X[[i]], ...)
11. mfe:::m.attrConc(...)
12. base::mapply(...)
17. base::`[.data.frame`(x, , j)
── 3. Error: multiclass.result (@test_metafeatures.R#6) ───────────────────────
undefined columns selected
Backtrace:
1. mfe::metafeatures(Species ~ ., iris)
2. mfe:::metafeatures.formula(Species ~ ., iris)
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
── 4. Error: binary.result (@test_metafeatures.R#18) ──────────────────────────
undefined columns selected
Backtrace:
1. mfe::metafeatures(Species ~ ., iris)
2. mfe:::metafeatures.formula(Species ~ ., iris)
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
── 5. Error: groups.result (@test_metafeatures.R#27) ──────────────────────────
undefined columns selected
Backtrace:
1. mfe::metafeatures(...)
2. mfe:::metafeatures.formula(...)
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
── 6. Error: all.result (@test_metafeatures.R#45) ─────────────────────────────
undefined columns selected
Backtrace:
1. mfe::metafeatures(Species ~ ., iris, "all")
2. mfe:::metafeatures.formula(Species ~ ., iris, "all")
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 87 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 6 ]
1. Error: infotheo.result (@test_infotheo.R#5)
2. Error: transform.false.result (@test_infotheo.R#25)
3. Error: multiclass.result (@test_metafeatures.R#6)
4. Error: binary.result (@test_metafeatures.R#18)
5. Error: groups.result (@test_metafeatures.R#27)
6. Error: all.result (@test_metafeatures.R#45)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.1.4
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
--- re-building ‘mfe-vignette.Rmd’ using rmarkdown
Quitting from lines 55-66 (mfe-vignette.Rmd)
Error: processing vignette 'mfe-vignette.Rmd' failed with diagnostics:
undefined columns selected
--- failed re-building ‘mfe-vignette.Rmd’
SUMMARY: processing the following file failed:
‘mfe-vignette.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8
Version: 0.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [29s/38s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(mfe)
>
> test_check("mfe")
── 1. Error: infotheo.result (@test_infotheo.R#5) ─────────────────────────────
undefined columns selected
Backtrace:
1. mfe::infotheo(Species ~ ., iris)
2. mfe:::infotheo.formula(Species ~ ., iris)
3. mfe:::infotheo.default(...)
4. base::sapply(...)
5. base::lapply(X = X, FUN = FUN, ...)
6. mfe:::FUN(X[[i]], ...)
8. mfe:::m.attrConc(...)
9. base::mapply(...)
14. base::`[.data.frame`(x, , j)
── 2. Error: transform.false.result (@test_infotheo.R#25) ─────────────────────
undefined columns selected
Backtrace:
1. testthat::expect_named(...)
5. mfe:::infotheo.formula(Species ~ ., data, ls.infotheo()[1:3])
6. mfe:::infotheo.default(...)
7. base::sapply(...)
8. base::lapply(X = X, FUN = FUN, ...)
9. mfe:::FUN(X[[i]], ...)
11. mfe:::m.attrConc(...)
12. base::mapply(...)
17. base::`[.data.frame`(x, , j)
── 3. Error: multiclass.result (@test_metafeatures.R#6) ───────────────────────
undefined columns selected
Backtrace:
1. mfe::metafeatures(Species ~ ., iris)
2. mfe:::metafeatures.formula(Species ~ ., iris)
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
── 4. Error: binary.result (@test_metafeatures.R#18) ──────────────────────────
undefined columns selected
Backtrace:
1. mfe::metafeatures(Species ~ ., iris)
2. mfe:::metafeatures.formula(Species ~ ., iris)
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
── 5. Error: groups.result (@test_metafeatures.R#27) ──────────────────────────
undefined columns selected
Backtrace:
1. mfe::metafeatures(...)
2. mfe:::metafeatures.formula(...)
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
── 6. Error: all.result (@test_metafeatures.R#45) ─────────────────────────────
undefined columns selected
Backtrace:
1. mfe::metafeatures(Species ~ ., iris, "all")
2. mfe:::metafeatures.formula(Species ~ ., iris, "all")
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 87 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 6 ]
1. Error: infotheo.result (@test_infotheo.R#5)
2. Error: transform.false.result (@test_infotheo.R#25)
3. Error: multiclass.result (@test_metafeatures.R#6)
4. Error: binary.result (@test_metafeatures.R#18)
5. Error: groups.result (@test_metafeatures.R#27)
6. Error: all.result (@test_metafeatures.R#45)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.1.4
Check: tests
Result: ERROR
Running 'testthat.R' [27s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(mfe)
>
> test_check("mfe")
-- 1. Error: infotheo.result (@test_infotheo.R#5) -----------------------------
undefined columns selected
Backtrace:
1. mfe::infotheo(Species ~ ., iris)
2. mfe:::infotheo.formula(Species ~ ., iris)
3. mfe:::infotheo.default(...)
4. base::sapply(...)
5. base::lapply(X = X, FUN = FUN, ...)
6. mfe:::FUN(X[[i]], ...)
8. mfe:::m.attrConc(...)
9. base::mapply(...)
14. base::`[.data.frame`(x, , j)
-- 2. Error: transform.false.result (@test_infotheo.R#25) ---------------------
undefined columns selected
Backtrace:
1. testthat::expect_named(...)
5. mfe:::infotheo.formula(Species ~ ., data, ls.infotheo()[1:3])
6. mfe:::infotheo.default(...)
7. base::sapply(...)
8. base::lapply(X = X, FUN = FUN, ...)
9. mfe:::FUN(X[[i]], ...)
11. mfe:::m.attrConc(...)
12. base::mapply(...)
17. base::`[.data.frame`(x, , j)
-- 3. Error: multiclass.result (@test_metafeatures.R#6) -----------------------
undefined columns selected
Backtrace:
1. mfe::metafeatures(Species ~ ., iris)
2. mfe:::metafeatures.formula(Species ~ ., iris)
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
-- 4. Error: binary.result (@test_metafeatures.R#18) --------------------------
undefined columns selected
Backtrace:
1. mfe::metafeatures(Species ~ ., iris)
2. mfe:::metafeatures.formula(Species ~ ., iris)
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
-- 5. Error: groups.result (@test_metafeatures.R#27) --------------------------
undefined columns selected
Backtrace:
1. mfe::metafeatures(...)
2. mfe:::metafeatures.formula(...)
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
-- 6. Error: all.result (@test_metafeatures.R#45) -----------------------------
undefined columns selected
Backtrace:
1. mfe::metafeatures(Species ~ ., iris, "all")
2. mfe:::metafeatures.formula(Species ~ ., iris, "all")
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
== testthat results ===========================================================
[ OK: 87 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 6 ]
1. Error: infotheo.result (@test_infotheo.R#5)
2. Error: transform.false.result (@test_infotheo.R#25)
3. Error: multiclass.result (@test_metafeatures.R#6)
4. Error: binary.result (@test_metafeatures.R#18)
5. Error: groups.result (@test_metafeatures.R#27)
6. Error: all.result (@test_metafeatures.R#45)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-windows-ix86+x86_64
Version: 0.1.4
Check: tests
Result: ERROR
Running 'testthat.R' [21s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(mfe)
>
> test_check("mfe")
-- 1. Error: infotheo.result (@test_infotheo.R#5) -----------------------------
undefined columns selected
Backtrace:
1. mfe::infotheo(Species ~ ., iris)
2. mfe:::infotheo.formula(Species ~ ., iris)
3. mfe:::infotheo.default(...)
4. base::sapply(...)
5. base::lapply(X = X, FUN = FUN, ...)
6. mfe:::FUN(X[[i]], ...)
8. mfe:::m.attrConc(...)
9. base::mapply(...)
14. base::`[.data.frame`(x, , j)
-- 2. Error: transform.false.result (@test_infotheo.R#25) ---------------------
undefined columns selected
Backtrace:
1. testthat::expect_named(...)
5. mfe:::infotheo.formula(Species ~ ., data, ls.infotheo()[1:3])
6. mfe:::infotheo.default(...)
7. base::sapply(...)
8. base::lapply(X = X, FUN = FUN, ...)
9. mfe:::FUN(X[[i]], ...)
11. mfe:::m.attrConc(...)
12. base::mapply(...)
17. base::`[.data.frame`(x, , j)
-- 3. Error: multiclass.result (@test_metafeatures.R#6) -----------------------
undefined columns selected
Backtrace:
1. mfe::metafeatures(Species ~ ., iris)
2. mfe:::metafeatures.formula(Species ~ ., iris)
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
-- 4. Error: binary.result (@test_metafeatures.R#18) --------------------------
undefined columns selected
Backtrace:
1. mfe::metafeatures(Species ~ ., iris)
2. mfe:::metafeatures.formula(Species ~ ., iris)
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
-- 5. Error: groups.result (@test_metafeatures.R#27) --------------------------
undefined columns selected
Backtrace:
1. mfe::metafeatures(...)
2. mfe:::metafeatures.formula(...)
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
-- 6. Error: all.result (@test_metafeatures.R#45) -----------------------------
undefined columns selected
Backtrace:
1. mfe::metafeatures(Species ~ ., iris, "all")
2. mfe:::metafeatures.formula(Species ~ ., iris, "all")
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
== testthat results ===========================================================
[ OK: 87 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 6 ]
1. Error: infotheo.result (@test_infotheo.R#5)
2. Error: transform.false.result (@test_infotheo.R#25)
3. Error: multiclass.result (@test_metafeatures.R#6)
4. Error: binary.result (@test_metafeatures.R#18)
5. Error: groups.result (@test_metafeatures.R#27)
6. Error: all.result (@test_metafeatures.R#45)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-windows-ix86+x86_64-gcc8
Version: 0.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [22s/26s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(mfe)
>
> test_check("mfe")
── 1. Error: infotheo.result (@test_infotheo.R#5) ─────────────────────────────
undefined columns selected
Backtrace:
1. mfe::infotheo(Species ~ ., iris)
2. mfe:::infotheo.formula(Species ~ ., iris)
3. mfe:::infotheo.default(...)
4. base::sapply(...)
5. base::lapply(X = X, FUN = FUN, ...)
6. mfe:::FUN(X[[i]], ...)
8. mfe:::m.attrConc(...)
9. base::mapply(...)
14. base::`[.data.frame`(x, , j)
── 2. Error: transform.false.result (@test_infotheo.R#25) ─────────────────────
undefined columns selected
Backtrace:
1. testthat::expect_named(...)
5. mfe:::infotheo.formula(Species ~ ., data, ls.infotheo()[1:3])
6. mfe:::infotheo.default(...)
7. base::sapply(...)
8. base::lapply(X = X, FUN = FUN, ...)
9. mfe:::FUN(X[[i]], ...)
11. mfe:::m.attrConc(...)
12. base::mapply(...)
17. base::`[.data.frame`(x, , j)
── 3. Error: multiclass.result (@test_metafeatures.R#6) ───────────────────────
undefined columns selected
Backtrace:
1. mfe::metafeatures(Species ~ ., iris)
2. mfe:::metafeatures.formula(Species ~ ., iris)
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
── 4. Error: binary.result (@test_metafeatures.R#18) ──────────────────────────
undefined columns selected
Backtrace:
1. mfe::metafeatures(Species ~ ., iris)
2. mfe:::metafeatures.formula(Species ~ ., iris)
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
── 5. Error: groups.result (@test_metafeatures.R#27) ──────────────────────────
undefined columns selected
Backtrace:
1. mfe::metafeatures(...)
2. mfe:::metafeatures.formula(...)
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
── 6. Error: all.result (@test_metafeatures.R#45) ─────────────────────────────
undefined columns selected
Backtrace:
1. mfe::metafeatures(Species ~ ., iris, "all")
2. mfe:::metafeatures.formula(Species ~ ., iris, "all")
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 87 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 6 ]
1. Error: infotheo.result (@test_infotheo.R#5)
2. Error: transform.false.result (@test_infotheo.R#25)
3. Error: multiclass.result (@test_metafeatures.R#6)
4. Error: binary.result (@test_metafeatures.R#18)
5. Error: groups.result (@test_metafeatures.R#27)
6. Error: all.result (@test_metafeatures.R#45)
Error: testthat unit tests failed
Execution halted
Flavor: r-patched-linux-x86_64
Version: 0.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [11s/15s]
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 87 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 6 ]
1. Error: infotheo.result (@test_infotheo.R#5)
2. Error: transform.false.result (@test_infotheo.R#25)
3. Error: multiclass.result (@test_metafeatures.R#6)
4. Error: binary.result (@test_metafeatures.R#18)
5. Error: groups.result (@test_metafeatures.R#27)
6. Error: all.result (@test_metafeatures.R#45)
Error: testthat unit tests failed
Execution halted
Flavor: r-patched-osx-x86_64
Version: 0.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [35s/44s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(mfe)
>
> test_check("mfe")
── 1. Error: infotheo.result (@test_infotheo.R#5) ─────────────────────────────
undefined columns selected
Backtrace:
1. mfe::infotheo(Species ~ ., iris)
2. mfe:::infotheo.formula(Species ~ ., iris)
3. mfe:::infotheo.default(...)
4. base::sapply(...)
5. base::lapply(X = X, FUN = FUN, ...)
6. mfe:::FUN(X[[i]], ...)
8. mfe:::m.attrConc(...)
9. base::mapply(...)
14. base::`[.data.frame`(x, , j)
── 2. Error: transform.false.result (@test_infotheo.R#25) ─────────────────────
undefined columns selected
Backtrace:
1. testthat::expect_named(...)
5. mfe:::infotheo.formula(Species ~ ., data, ls.infotheo()[1:3])
6. mfe:::infotheo.default(...)
7. base::sapply(...)
8. base::lapply(X = X, FUN = FUN, ...)
9. mfe:::FUN(X[[i]], ...)
11. mfe:::m.attrConc(...)
12. base::mapply(...)
17. base::`[.data.frame`(x, , j)
── 3. Error: multiclass.result (@test_metafeatures.R#6) ───────────────────────
undefined columns selected
Backtrace:
1. mfe::metafeatures(Species ~ ., iris)
2. mfe:::metafeatures.formula(Species ~ ., iris)
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
── 4. Error: binary.result (@test_metafeatures.R#18) ──────────────────────────
undefined columns selected
Backtrace:
1. mfe::metafeatures(Species ~ ., iris)
2. mfe:::metafeatures.formula(Species ~ ., iris)
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
── 5. Error: groups.result (@test_metafeatures.R#27) ──────────────────────────
undefined columns selected
Backtrace:
1. mfe::metafeatures(...)
2. mfe:::metafeatures.formula(...)
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
── 6. Error: all.result (@test_metafeatures.R#45) ─────────────────────────────
undefined columns selected
Backtrace:
1. mfe::metafeatures(Species ~ ., iris, "all")
2. mfe:::metafeatures.formula(Species ~ ., iris, "all")
3. mfe:::metafeatures.default(...)
5. base::sapply(...)
6. base::lapply(X = X, FUN = FUN, ...)
7. mfe:::FUN(X[[i]], ...)
9. mfe:::infotheo.default(...)
10. base::sapply(...)
11. base::lapply(X = X, FUN = FUN, ...)
12. mfe:::FUN(X[[i]], ...)
14. mfe:::m.attrConc(...)
15. base::mapply(...)
20. base::`[.data.frame`(x, , j)
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 87 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 6 ]
1. Error: infotheo.result (@test_infotheo.R#5)
2. Error: transform.false.result (@test_infotheo.R#25)
3. Error: multiclass.result (@test_metafeatures.R#6)
4. Error: binary.result (@test_metafeatures.R#18)
5. Error: groups.result (@test_metafeatures.R#27)
6. Error: all.result (@test_metafeatures.R#45)
Error: testthat unit tests failed
Execution halted
Flavor: r-patched-solaris-x86
Version: 0.1.4
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘mfe-vignette.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Quitting from lines 55-66 (mfe-vignette.Rmd)
Error: processing vignette 'mfe-vignette.Rmd' failed with diagnostics:
undefined columns selected
--- failed re-building ‘mfe-vignette.Rmd’
SUMMARY: processing the following file failed:
‘mfe-vignette.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-patched-solaris-x86
Version: 0.1.4
Check: package dependencies
Result: ERROR
Package required and available but unsuitable version: ‘ECoL’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-oldrel-osx-x86_64