CRAN Package Check Results for Package somspace

Last updated on 2020-04-09 10:49:55 CEST.

Check Details

Version: 1.0.0
Check: package vignettes
Result: NOTE
    Package vignette with placeholder title 'Vignette Title':
     'somspace.Rmd'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8, r-patched-linux-x86_64

Version: 1.0.0
Check: examples
Result: ERROR
    Running examples in ‘somspace-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: cnet
    > ### Title: Complex network analysis
    > ### Aliases: cnet
    >
    > ### ** Examples
    >
    > dummy <- owda[Time <= 1600] #toy example
    > inp_som <- sominp(dummy)
    > my_som <- somspa(inp_som, rlen = 100, grid = somgrid(3, 3, "hexagonal"))
    > my_regions <- somregs(my_som, nregions = 6)
    > cnet(my_regions, n = 5, thres = 0.2)
    Error in value[[3L]](cond) :
     The melt generic in data.table has been passed a matrix, but data.table::melt currently only has a method for data.tables. Please confirm your input is a data.table, with setDT(cor_regs(x, n)) or as.data.table(cor_regs(x, n)). If you intend to use a method from reshape2, try installing that package first, but do note that reshape2 is deprecated and you should be migrating your code away from using it.
    Calls: cnet ... tryCatch -> tryCatchList -> tryCatchOne -> <Anonymous>
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0.0
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘somspace.Rmd’ using rmarkdown
    dyld: lazy symbol binding failed: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    dyld: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    Error: processing vignette 'somspace.Rmd' failed with diagnostics:
    pandoc document conversion failed with error 6
    --- failed re-building ‘somspace.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘somspace.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-osx-x86_64