CRAN Package Check Results for Package phmm

Last updated on 2020-04-10 08:52:38 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.7-14 12.42 87.73 100.15 OK
r-devel-linux-x86_64-debian-gcc 0.7-14 9.24 69.88 79.12 OK
r-devel-linux-x86_64-fedora-clang 0.7-14 121.35 OK
r-devel-linux-x86_64-fedora-gcc 0.7-14 123.57 OK
r-devel-windows-ix86+x86_64 0.7-14 30.00 133.00 163.00 OK
r-devel-windows-ix86+x86_64-gcc8 0.7-14 29.00 130.00 159.00 OK
r-patched-linux-x86_64 0.7-14 10.81 87.56 98.37 OK
r-patched-osx-x86_64 0.7-14 WARN
r-patched-solaris-x86 0.7-14 145.90 WARN
r-release-linux-x86_64 0.7-14 9.89 83.22 93.11 OK
r-release-windows-ix86+x86_64 0.7-14 27.00 141.00 168.00 OK
r-release-osx-x86_64 0.7-14 OK
r-oldrel-windows-ix86+x86_64 0.7-14 31.00 162.00 193.00 OK
r-oldrel-osx-x86_64 0.7-11 OK

Additional issues

clang-ASAN clang-UBSAN gcc-ASAN gcc-UBSAN

Check Details

Version: 0.7-14
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘phmm_poisson_df.Rmd’ using rmarkdown
    Loading required package: survival
    Loading required package: lattice
    Loading required package: Matrix
    dyld: lazy symbol binding failed: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    dyld: Symbol not found: ____chkstk_darwin
     Referenced from: /usr/local/bin/pandoc (which was built for Mac OS X 10.15)
     Expected in: /usr/lib/libSystem.B.dylib
    
    Error: processing vignette 'phmm_poisson_df.Rmd' failed with diagnostics:
    pandoc document conversion failed with error 6
    --- failed re-building ‘phmm_poisson_df.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘phmm_poisson_df.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-osx-x86_64

Version: 0.7-14
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘phmm_poisson_df.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Loading required package: survival
    Loading required package: lattice
    Loading required package: Matrix
    Quitting from lines 118-123 (phmm_poisson_df.Rmd)
    Error: processing vignette 'phmm_poisson_df.Rmd' failed with diagnostics:
    Singular matrix in routine ludcmp
    --- failed re-building ‘phmm_poisson_df.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘phmm_poisson_df.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86