Last updated on 2020-04-17 07:52:11 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.2 | 24.28 | 248.57 | 272.85 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.0.2 | 21.84 | 188.23 | 210.07 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.0.2 | 347.01 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0.2 | 332.02 | OK | |||
| r-devel-windows-ix86+x86_64 | 1.0.2 | 48.00 | 237.00 | 285.00 | OK | |
| r-patched-linux-x86_64 | 1.0.2 | 25.17 | 236.15 | 261.32 | OK | |
| r-patched-osx-x86_64 | 1.0.2 | ERROR | ||||
| r-patched-solaris-x86 | 1.0.2 | 439.40 | WARN | |||
| r-release-linux-x86_64 | 1.0.2 | 20.34 | 217.48 | 237.82 | OK | |
| r-release-windows-ix86+x86_64 | 1.0.2 | 37.00 | 290.00 | 327.00 | WARN | |
| r-release-osx-x86_64 | 1.0.2 | OK | ||||
| r-oldrel-windows-ix86+x86_64 | 1.0.2 | 35.00 | 233.00 | 268.00 | WARN | |
| r-oldrel-osx-x86_64 | 1.0.2 | OK |
Version: 1.0.2
Check: running R code from vignettes
Result: ERROR
Errors in running code in vignettes:
when running code in ‘liayson.Rnw’
...
> data(epg)
> data(segments)
> X = aggregateSegmentExpression(epg, segments, mingps = 20,
+ GRCh = 38)
When sourcing ‘liayson.R’:
Error: Service Unavailable (HTTP 503).
Execution halted
‘liayson.Rnw’... failed
Flavor: r-patched-osx-x86_64
Version: 1.0.2
Check: re-building of vignette outputs
Result: NOTE
Error(s) in re-building vignettes:
...
--- re-building ‘liayson.Rnw’ using Sweave
Error: processing vignette 'liayson.Rnw' failed with diagnostics:
chunk 1
Error in bmRequest(request = request, verbose = verbose) :
Service Unavailable (HTTP 503).
--- failed re-building ‘liayson.Rnw’
SUMMARY: processing the following file failed:
‘liayson.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavor: r-patched-osx-x86_64
Version: 1.0.2
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘liayson.Rnw’ using Sweave
Error: processing vignette 'liayson.Rnw' failed with diagnostics:
chunk 1
Error in bmRequest(request = request, verbose = verbose) :
Service Unavailable (HTTP 503).
--- failed re-building ‘liayson.Rnw’
SUMMARY: processing the following file failed:
‘liayson.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavor: r-patched-solaris-x86
Version: 1.0.2
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
--- re-building 'liayson.Rnw' using Sweave
Error: processing vignette 'liayson.Rnw' failed with diagnostics:
chunk 1
Error in bmRequest(request = request, verbose = verbose) :
Service Unavailable (HTTP 503).
--- failed re-building 'liayson.Rnw'
SUMMARY: processing the following file failed:
'liayson.Rnw'
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-windows-ix86+x86_64
Version: 1.0.2
Check: re-building of vignette outputs
Result: WARN
Error in re-building vignettes:
...
Error: processing vignette 'liayson.Rnw' failed with diagnostics:
chunk 1
Error in listMarts(host = host, path = path, port = port, includeHosts = TRUE, :
Unexpected format to the list of available marts.
Please check the following URL manually, and try ?listMarts for advice.
http://grch38.ensembl.org:80/biomart/martservice?type=registry&requestid=biomaRt
Execution halted
Flavor: r-oldrel-windows-ix86+x86_64