CRAN Package Check Results for Package MFKnockoffs

Last updated on 2020-05-31 07:48:51 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.9.1 3.39 941.44 944.83 ERROR
r-devel-linux-x86_64-debian-gcc 0.9.1 2.42 670.40 672.82 ERROR
r-devel-linux-x86_64-fedora-clang 0.9.1 1179.18 ERROR
r-devel-linux-x86_64-fedora-gcc 0.9.1 1186.15 ERROR
r-devel-windows-ix86+x86_64 0.9.1 9.00 1132.00 1141.00 NOTE
r-patched-linux-x86_64 0.9.1 3.18 938.44 941.62 ERROR
r-patched-solaris-x86 0.9.1 2993.60 ERROR
r-release-linux-x86_64 0.9.1 3.21 937.78 940.99 ERROR
r-release-osx-x86_64 0.9.1 OK
r-release-windows-ix86+x86_64 0.9.1 8.00 1145.00 1153.00 NOTE
r-oldrel-osx-x86_64 0.9.1 FAIL
r-oldrel-windows-ix86+x86_64 0.9.1 6.00 910.00 916.00 NOTE

Check Details

Version: 0.9.1
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: 'flare'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64

Version: 0.9.1
Check: Rd cross-references
Result: NOTE
    Unknown package 'flare' in Rd xrefs
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.9.1
Check: examples
Result: ERROR
    Running examples in 'MFKnockoffs-Ex.R' failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: MFKnockoffs.stat.sqrt_lasso
    > ### Title: SQRT-lasso statistics for Knockoff
    > ### Aliases: MFKnockoffs.stat.sqrt_lasso
    >
    > ### ** Examples
    >
    > p=50; n=50; k=10
    > mu = rep(0,p); Sigma = diag(p)
    > X = matrix(rnorm(n*p),n)
    > nonzero = sample(p, k)
    > beta = 3.5 * (1:p %in% nonzero)
    > y = X %*% beta + rnorm(n)
    >
    > knockoffs = function(X) MFKnockoffs.create.gaussian(X, mu, Sigma)
    > result = MFKnockoffs.filter(X, y, knockoffs=knockoffs, statistic=MFKnockoffs.stat.sqrt_lasso)
    Error: flare is not installed
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.9.1
Check: examples
Result: ERROR
    Running examples in ‘MFKnockoffs-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: MFKnockoffs.stat.sqrt_lasso
    > ### Title: SQRT-lasso statistics for Knockoff
    > ### Aliases: MFKnockoffs.stat.sqrt_lasso
    >
    > ### ** Examples
    >
    > p=50; n=50; k=10
    > mu = rep(0,p); Sigma = diag(p)
    > X = matrix(rnorm(n*p),n)
    > nonzero = sample(p, k)
    > beta = 3.5 * (1:p %in% nonzero)
    > y = X %*% beta + rnorm(n)
    >
    > knockoffs = function(X) MFKnockoffs.create.gaussian(X, mu, Sigma)
    > result = MFKnockoffs.filter(X, y, knockoffs=knockoffs, statistic=MFKnockoffs.stat.sqrt_lasso)
    Error: flare is not installed
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86

Version: 0.9.1
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: 'doMC'
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.9.1
Check: re-building of vignette outputs
Result: FAIL
Flavor: r-oldrel-osx-x86_64