Last updated on 2020-06-23 18:50:44 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.2-2 | 5.33 | 56.62 | 61.95 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 2.2-2 | 3.95 | 43.69 | 47.64 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 2.2-2 | 86.21 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 2.2-2 | 72.42 | ERROR | |||
| r-devel-windows-ix86+x86_64 | 2.2-2 | 14.00 | 126.00 | 140.00 | OK | |
| r-patched-linux-x86_64 | 2.2-2 | 4.93 | 55.47 | 60.40 | ERROR | |
| r-patched-solaris-x86 | 2.2-2 | 108.60 | ERROR | |||
| r-release-linux-x86_64 | 2.2-2 | 4.69 | 55.49 | 60.18 | ERROR | |
| r-release-osx-x86_64 | 2.2-2 | OK | ||||
| r-release-windows-ix86+x86_64 | 2.2-2 | 10.00 | 129.00 | 139.00 | OK | |
| r-oldrel-osx-x86_64 | 2.2-2 | OK | ||||
| r-oldrel-windows-ix86+x86_64 | 2.2-2 | 10.00 | 128.00 | 138.00 | OK |
Version: 2.2-2
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: 'sapa'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64
Version: 2.2-2
Check: Rd cross-references
Result: NOTE
Unknown package 'sapa' in Rd xrefs
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64
Version: 2.2-2
Check: examples
Result: ERROR
Running examples in 'kitagawa-Ex.R' failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: cross_spectrum
> ### Title: Calculate the cross-spectrum of two timeseries
> ### Aliases: cross_spectrum cross_spectrum.mts cross_spectrum.default
>
> ### ** Examples
>
> require(stats)
>
> n <- 1000
> ramp <- seq_len(n)
> parab <- ramp^2
>
> set.seed(1255)
> X <- ts(rnorm(n) + ramp/2)
> Y <- ts(rnorm(n) + ramp/10 + parab/100)
>
> # Calculate the cross spectrum, multitaper if K is not NULL
> csd <- cross_spectrum(X, Y, k=20)
calculating sine-multitaper spectra...
Error in loadNamespace(name) : there is no package called 'sapa'
Calls: cross_spectrum ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 2.2-2
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building 'Tohoku.Rmd' using rmarkdown
Quitting from lines 86-90 (Tohoku.Rmd)
Error: processing vignette 'Tohoku.Rmd' failed with diagnostics:
there is no package called 'sapa'
--- failed re-building 'Tohoku.Rmd'
--- re-building 'ResponseModels.Rnw' using knitr
Warning in block_exec(params) :
Failed to tidy R code in chunk 'PRELIM'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'PARAMS1'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'PARAMS2'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'KITRESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'COOPERRESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'HSIEHRESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'LIURESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'ROJRESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
--- finished re-building 'ResponseModels.Rnw'
make[1]: Entering directory '/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kitagawa.Rcheck/vign_test/kitagawa/vignettes'
/home/hornik/tmp/R.check/r-devel-clang/Work/build/bin/Rscript -e "if (getRversion() < '3.0.0') knitr::knit2pdf('ResponseModels.Rnw') else tools::texi2pdf('ResponseModels.tex')"
make[1]: Leaving directory '/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kitagawa.Rcheck/vign_test/kitagawa/vignettes'
make[1]: Entering directory '/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kitagawa.Rcheck/vign_test/kitagawa/vignettes'
rm -rf *-concordance.tex *.bbl *.blg *.aux *.out *.log *.spl *.md figure/ *.idx *.ilg *.ind *.toc
make[1]: Leaving directory '/home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kitagawa.Rcheck/vign_test/kitagawa/vignettes'
SUMMARY: processing the following file failed:
'Tohoku.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 2.2-2
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘Tohoku.Rmd’ using rmarkdown
Quitting from lines 86-90 (Tohoku.Rmd)
Error: processing vignette 'Tohoku.Rmd' failed with diagnostics:
there is no package called 'sapa'
--- failed re-building ‘Tohoku.Rmd’
--- re-building ‘ResponseModels.Rnw’ using knitr
Warning in block_exec(params) :
Failed to tidy R code in chunk 'PRELIM'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'PARAMS1'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'PARAMS2'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'KITRESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'COOPERRESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'HSIEHRESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'LIURESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'ROJRESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
--- finished re-building ‘ResponseModels.Rnw’
make[1]: Entering directory '/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/kitagawa.Rcheck/vign_test/kitagawa/vignettes'
/home/hornik/tmp/R.check/r-devel-gcc/Work/build/bin/Rscript -e "if (getRversion() < '3.0.0') knitr::knit2pdf('ResponseModels.Rnw') else tools::texi2pdf('ResponseModels.tex')"
make[1]: Leaving directory '/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/kitagawa.Rcheck/vign_test/kitagawa/vignettes'
make[1]: Entering directory '/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/kitagawa.Rcheck/vign_test/kitagawa/vignettes'
rm -rf *-concordance.tex *.bbl *.blg *.aux *.out *.log *.spl *.md figure/ *.idx *.ilg *.ind *.toc
make[1]: Leaving directory '/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/kitagawa.Rcheck/vign_test/kitagawa/vignettes'
SUMMARY: processing the following file failed:
‘Tohoku.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 2.2-2
Check: examples
Result: ERROR
Running examples in ‘kitagawa-Ex.R’ failed
The error most likely occurred in:
> ### Name: cross_spectrum
> ### Title: Calculate the cross-spectrum of two timeseries
> ### Aliases: cross_spectrum cross_spectrum.mts cross_spectrum.default
>
> ### ** Examples
>
> require(stats)
>
> n <- 1000
> ramp <- seq_len(n)
> parab <- ramp^2
>
> set.seed(1255)
> X <- ts(rnorm(n) + ramp/2)
> Y <- ts(rnorm(n) + ramp/10 + parab/100)
>
> # Calculate the cross spectrum, multitaper if K is not NULL
> csd <- cross_spectrum(X, Y, k=20)
calculating sine-multitaper spectra...
Error in loadNamespace(name) : there is no package called ‘sapa’
Calls: cross_spectrum ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86
Version: 2.2-2
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
--- re-building ‘Tohoku.Rmd’ using rmarkdown
Quitting from lines 86-90 (Tohoku.Rmd)
Error: processing vignette 'Tohoku.Rmd' failed with diagnostics:
there is no package called 'sapa'
--- failed re-building ‘Tohoku.Rmd’
--- re-building ‘ResponseModels.Rnw’ using knitr
Warning in block_exec(params) :
Failed to tidy R code in chunk 'PRELIM'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'PARAMS1'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'PARAMS2'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'KITRESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'COOPERRESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'HSIEHRESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'LIURESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'ROJRESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
--- finished re-building ‘ResponseModels.Rnw’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/kitagawa.Rcheck/vign_test/kitagawa/vignettes'
/data/gannet/ripley/R/R-clang/bin/Rscript -e "if (getRversion() < '3.0.0') knitr::knit2pdf('ResponseModels.Rnw') else tools::texi2pdf('ResponseModels.tex')"
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/kitagawa.Rcheck/vign_test/kitagawa/vignettes'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/kitagawa.Rcheck/vign_test/kitagawa/vignettes'
rm -rf *-concordance.tex *.bbl *.blg *.aux *.out *.log *.spl *.md figure/ *.idx *.ilg *.ind *.toc
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/kitagawa.Rcheck/vign_test/kitagawa/vignettes'
SUMMARY: processing the following file failed:
‘Tohoku.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 2.2-2
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
--- re-building ‘Tohoku.Rmd’ using rmarkdown
Quitting from lines 86-90 (Tohoku.Rmd)
Error: processing vignette 'Tohoku.Rmd' failed with diagnostics:
there is no package called 'sapa'
--- failed re-building ‘Tohoku.Rmd’
--- re-building ‘ResponseModels.Rnw’ using knitr
--- finished re-building ‘ResponseModels.Rnw’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/kitagawa.Rcheck/vign_test/kitagawa/vignettes'
/data/gannet/ripley/R/R-devel/bin/Rscript -e "if (getRversion() < '3.0.0') knitr::knit2pdf('ResponseModels.Rnw') else tools::texi2pdf('ResponseModels.tex')"
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/kitagawa.Rcheck/vign_test/kitagawa/vignettes'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-devel/kitagawa.Rcheck/vign_test/kitagawa/vignettes'
rm -rf *-concordance.tex *.bbl *.blg *.aux *.out *.log *.spl *.md figure/ *.idx *.ilg *.ind *.toc
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-devel/kitagawa.Rcheck/vign_test/kitagawa/vignettes'
SUMMARY: processing the following file failed:
‘Tohoku.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 2.2-2
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘Tohoku.Rmd’ using rmarkdown
Quitting from lines 86-90 (Tohoku.Rmd)
Error: processing vignette 'Tohoku.Rmd' failed with diagnostics:
there is no package called 'sapa'
--- failed re-building ‘Tohoku.Rmd’
--- re-building ‘ResponseModels.Rnw’ using knitr
Warning in block_exec(params) :
Failed to tidy R code in chunk 'PRELIM'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'PARAMS1'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'PARAMS2'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'KITRESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'COOPERRESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'HSIEHRESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'LIURESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'ROJRESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
--- finished re-building ‘ResponseModels.Rnw’
make[1]: Entering directory '/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/kitagawa.Rcheck/vign_test/kitagawa/vignettes'
/home/hornik/tmp/R.check/r-patched-gcc/Work/build/bin/Rscript -e "if (getRversion() < '3.0.0') knitr::knit2pdf('ResponseModels.Rnw') else tools::texi2pdf('ResponseModels.tex')"
make[1]: Leaving directory '/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/kitagawa.Rcheck/vign_test/kitagawa/vignettes'
make[1]: Entering directory '/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/kitagawa.Rcheck/vign_test/kitagawa/vignettes'
rm -rf *-concordance.tex *.bbl *.blg *.aux *.out *.log *.spl *.md figure/ *.idx *.ilg *.ind *.toc
make[1]: Leaving directory '/home/hornik/tmp/R.check/r-patched-gcc/Work/PKGS/kitagawa.Rcheck/vign_test/kitagawa/vignettes'
SUMMARY: processing the following file failed:
‘Tohoku.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-patched-linux-x86_64
Version: 2.2-2
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘Tohoku.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Quitting from lines 86-90 (Tohoku.Rmd)
Error: processing vignette 'Tohoku.Rmd' failed with diagnostics:
there is no package called 'sapa'
--- failed re-building ‘Tohoku.Rmd’
--- re-building ‘ResponseModels.Rnw’ using knitr
Warning in block_exec(params) :
Failed to tidy R code in chunk 'PRELIM'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'PARAMS1'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'PARAMS2'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'KITRESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'COOPERRESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'HSIEHRESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'LIURESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'ROJRESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
--- finished re-building ‘ResponseModels.Rnw’
/home/ripley/R/cc/bin/Rscript -e "if (getRversion() < '3.0.0') knitr::knit2pdf('ResponseModels.Rnw') else tools::texi2pdf('ResponseModels.tex')"
rm -rf *-concordance.tex *.bbl *.blg *.aux *.out *.log *.spl *.md figure/ *.idx *.ilg *.ind *.toc
SUMMARY: processing the following file failed:
‘Tohoku.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-patched-solaris-x86
Version: 2.2-2
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘Tohoku.Rmd’ using rmarkdown
Quitting from lines 86-90 (Tohoku.Rmd)
Error: processing vignette 'Tohoku.Rmd' failed with diagnostics:
there is no package called 'sapa'
--- failed re-building ‘Tohoku.Rmd’
--- re-building ‘ResponseModels.Rnw’ using knitr
Warning in block_exec(params) :
Failed to tidy R code in chunk 'PRELIM'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'PARAMS1'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'PARAMS2'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'KITRESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'COOPERRESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'HSIEHRESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'LIURESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
Warning in block_exec(params) :
Failed to tidy R code in chunk 'ROJRESP'. Reason:
Error in loadNamespace(name) : there is no package called 'formatR'
--- finished re-building ‘ResponseModels.Rnw’
make[1]: Entering directory '/home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kitagawa.Rcheck/vign_test/kitagawa/vignettes'
/home/hornik/tmp/R.check/r-release-gcc/Work/build/bin/Rscript -e "if (getRversion() < '3.0.0') knitr::knit2pdf('ResponseModels.Rnw') else tools::texi2pdf('ResponseModels.tex')"
make[1]: Leaving directory '/home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kitagawa.Rcheck/vign_test/kitagawa/vignettes'
make[1]: Entering directory '/home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kitagawa.Rcheck/vign_test/kitagawa/vignettes'
rm -rf *-concordance.tex *.bbl *.blg *.aux *.out *.log *.spl *.md figure/ *.idx *.ilg *.ind *.toc
make[1]: Leaving directory '/home/hornik/tmp/R.check/r-release-gcc/Work/PKGS/kitagawa.Rcheck/vign_test/kitagawa/vignettes'
SUMMARY: processing the following file failed:
‘Tohoku.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-linux-x86_64