Last updated on 2020-07-26 08:49:30 CEST.
Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
---|---|---|---|---|---|---|
r-devel-linux-x86_64-debian-clang | 0.1-2 | 8.68 | 67.01 | 75.69 | WARN | |
r-devel-linux-x86_64-debian-gcc | 0.1-2 | 7.10 | 50.55 | 57.65 | WARN | |
r-devel-linux-x86_64-fedora-clang | 0.1-2 | 97.07 | WARN | |||
r-devel-linux-x86_64-fedora-gcc | 0.1-2 | 88.02 | WARN | |||
r-devel-windows-ix86+x86_64 | 0.1-2 | 21.00 | 76.00 | 97.00 | WARN | |
r-patched-linux-x86_64 | 0.1-2 | 8.22 | 64.57 | 72.79 | NOTE | |
r-patched-solaris-x86 | 0.1-2 | 134.00 | NOTE | |||
r-release-linux-x86_64 | 0.1-2 | 8.91 | 65.81 | 74.72 | NOTE | |
r-release-windows-ix86+x86_64 | 0.1-2 | 22.00 | 71.00 | 93.00 | NOTE | |
r-oldrel-macos-x86_64 | 0.1-2 | NOTE | ||||
r-oldrel-windows-ix86+x86_64 | 0.1-2 | 14.00 | 96.00 | 110.00 | NOTE |
Version: 0.1-2
Check: whether the namespace can be loaded with stated dependencies
Result: WARN
Warning: S4 exports specified in 'NAMESPACE' but not defined in package 'lmmlasso'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64
Version: 0.1-2
Check: dependencies in R code
Result: NOTE
Packages in Depends field not imported from:
'emulator' 'methods' 'miscTools' 'penalized'
These packages need to be imported from (in the NAMESPACE file)
for when this namespace is loaded but not attached.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64
Version: 0.1-2
Check: R code for possible problems
Result: NOTE
File 'lmmlasso/R/zzz.R':
.onAttach calls:
cat("----------------------------------------------------------------------", "This is a test release of the package 'lmmlasso'. If you have any questions or problems, do not hesitate to contact the author.", "----------------------------------------------------------------------", sep = "\n")
Package startup functions should use 'packageStartupMessage' to
generate messages.
See section 'Good practice' in '?.onAttach'.
LambdaInv: no visible global function definition for 'quad.tform'
MLloglik: no visible global function definition for 'quad.form'
MLpdDiag: no visible global function definition for 'optimize'
MLpdDiag: no visible global function definition for 'nlminb'
MLpdIdent: no visible global function definition for 'optimize'
MLpdIdent: no visible global function definition for 'nlminb'
MLpdSym: no visible global function definition for 'triang'
MLpdSym: no visible global function definition for 'optimize'
MLpdSym: no visible global function definition for 'nlminb'
MLpdSym: no visible global function definition for 'vecli'
MLpdSymLambda: no visible global function definition for 'quad.tform'
MLsigma: no visible global function definition for 'optimize'
MLsigma: no visible global function definition for 'nlminb'
MLsigmaZPsiZt: no visible global function definition for 'quad.tform'
MedianValue: no visible global function definition for 'median'
ObjFunction : tResLRes: no visible global function definition for
'quad.form'
covStartingValues : optimize3: no visible global function definition
for 'quad.form.inv'
covStartingValues: no visible global function definition for 'optimize'
lmmlasso.default: no visible binding for global variable 'sd'
lmmlasso.default: no visible global function definition for 'optL1'
lmmlasso.default: no visible global function definition for 'optL2'
lmmlasso.default: no visible global function definition for 'vecli'
lmmlasso.default: no visible global function definition for 'triang'
lmmlasso.default: no visible global function definition for 'cov2cor'
plot.lmmlasso: no visible global function definition for 'par'
plot.lmmlasso: no visible global function definition for 'abline'
plot.lmmlasso: no visible global function definition for 'qqnorm'
plot.lmmlasso: no visible global function definition for 'qqline'
plot.lmmlasso: no visible global function definition for 'boxplot'
plot.lmmlasso: no visible global function definition for 'hist'
plot.lmmlasso: no visible global function definition for 'rug'
Undefined global functions or variables:
abline boxplot cov2cor hist median nlminb optL1 optL2 optimize par
qqline qqnorm quad.form quad.form.inv quad.tform rug sd triang vecli
Consider adding
importFrom("graphics", "abline", "boxplot", "hist", "par", "rug")
importFrom("stats", "cov2cor", "median", "nlminb", "optimize",
"qqline", "qqnorm", "sd")
to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-windows-ix86+x86_64
Version: 0.1-2
Check: Rd line widths
Result: NOTE
Rd file 'plot.lmmlasso.Rd':
\examples lines wider than 100 characters:
fit <- lmmlasso(x=classroomStudy$X,y=classroomStudy$y,z=classroomStudy$Z,grp=classroomStudy$grp,lambda=15,pdMat="pdIdent")
These lines will be truncated in the PDF manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 0.1-2
Check: R code for possible problems
Result: NOTE
File ‘lmmlasso/R/zzz.R’:
.onAttach calls:
cat("----------------------------------------------------------------------", "This is a test release of the package 'lmmlasso'. If you have any questions or problems, do not hesitate to contact the author.", "----------------------------------------------------------------------", sep = "\n")
Package startup functions should use ‘packageStartupMessage’ to
generate messages.
See section ‘Good practice’ in '?.onAttach'.
LambdaInv: no visible global function definition for ‘quad.tform’
MLloglik: no visible global function definition for ‘quad.form’
MLpdDiag: no visible global function definition for ‘optimize’
MLpdDiag: no visible global function definition for ‘nlminb’
MLpdIdent: no visible global function definition for ‘optimize’
MLpdIdent: no visible global function definition for ‘nlminb’
MLpdSym: no visible global function definition for ‘triang’
MLpdSym: no visible global function definition for ‘optimize’
MLpdSym: no visible global function definition for ‘nlminb’
MLpdSym: no visible global function definition for ‘vecli’
MLpdSymLambda: no visible global function definition for ‘quad.tform’
MLsigma: no visible global function definition for ‘optimize’
MLsigma: no visible global function definition for ‘nlminb’
MLsigmaZPsiZt: no visible global function definition for ‘quad.tform’
MedianValue: no visible global function definition for ‘median’
ObjFunction : tResLRes: no visible global function definition for
‘quad.form’
covStartingValues : optimize3: no visible global function definition
for ‘quad.form.inv’
covStartingValues: no visible global function definition for ‘optimize’
lmmlasso.default: no visible binding for global variable ‘sd’
lmmlasso.default: no visible global function definition for ‘optL1’
lmmlasso.default: no visible global function definition for ‘optL2’
lmmlasso.default: no visible global function definition for ‘vecli’
lmmlasso.default: no visible global function definition for ‘triang’
lmmlasso.default: no visible global function definition for ‘cov2cor’
plot.lmmlasso: no visible global function definition for ‘par’
plot.lmmlasso: no visible global function definition for ‘plot’
plot.lmmlasso: no visible global function definition for ‘abline’
plot.lmmlasso: no visible global function definition for ‘qqnorm’
plot.lmmlasso: no visible global function definition for ‘qqline’
plot.lmmlasso: no visible global function definition for ‘boxplot’
plot.lmmlasso: no visible global function definition for ‘hist’
plot.lmmlasso: no visible global function definition for ‘rug’
Undefined global functions or variables:
abline boxplot cov2cor hist median nlminb optL1 optL2 optimize par
plot qqline qqnorm quad.form quad.form.inv quad.tform rug sd triang
vecli
Consider adding
importFrom("graphics", "abline", "boxplot", "hist", "par", "plot",
"rug")
importFrom("stats", "cov2cor", "median", "nlminb", "optimize",
"qqline", "qqnorm", "sd")
to your NAMESPACE file.
Flavors: r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64