CRAN Package Check Results for Package NeatMap

Last updated on 2020-08-03 07:51:09 CEST.

Check Details

Version: 0.3.6.2
Check: R code for possible problems
Result: NOTE
    data.reduction: no visible global function definition for 'prcomp'
    data.reduction: no visible global function definition for 'hclust'
    data.reduction: no visible global function definition for 'as.dist'
    data.reduction: no visible global function definition for 'cor'
    data.reduction: no visible global function definition for 'dist'
    heatmap1: no visible global function definition for 'sd'
    lineplot: no visible global function definition for 'sd'
    normalize: no visible global function definition for 'sd'
    profileplot3d : ColorFunction: no visible global function definition
     for 'rgb'
    profileplot3d : ColorFunction: no visible global function definition
     for 'colorRamp'
    profileplot3d: no visible global function definition for 'sd'
    profileplot3d: no visible global function definition for 'gray'
    Undefined global functions or variables:
     as.dist colorRamp cor dist gray hclust prcomp rgb sd
    Consider adding
     importFrom("grDevices", "colorRamp", "gray", "rgb")
     importFrom("stats", "as.dist", "cor", "dist", "hclust", "prcomp", "sd")
    to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.3.6.2
Check: compiled code
Result: NOTE
    File 'NeatMap/libs/NeatMap.so':
     Found 'rand', possibly from 'rand' (C)
     Object: 'nMDS_R.o'
     Found 'srand', possibly from 'srand' (C)
     Object: 'nMDS_R.o'
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor use Fortran I/O
    nor system RNGs.
    
    See 'Writing portable packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64

Version: 0.3.6.2
Check: compiled code
Result: NOTE
    File ‘NeatMap/libs/NeatMap.so’:
     Found ‘rand’, possibly from ‘rand’ (C)
     Object: ‘nMDS_R.o’
     Found ‘srand’, possibly from ‘srand’ (C)
     Object: ‘nMDS_R.o’
    File ‘NeatMap/libs/NeatMap.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor use Fortran I/O
    nor system RNGs.
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.3.6.2
Check: compiled code
Result: NOTE
    File 'NeatMap/libs/i386/NeatMap.dll':
     Found 'rand', possibly from 'rand' (C)
     Object: 'nMDS_R.o'
     Found 'srand', possibly from 'srand' (C)
     Object: 'nMDS_R.o'
    File 'NeatMap/libs/x64/NeatMap.dll':
     Found 'rand', possibly from 'rand' (C)
     Object: 'nMDS_R.o'
     Found 'srand', possibly from 'srand' (C)
     Object: 'nMDS_R.o'
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor use Fortran I/O
    nor system RNGs.
    
    See 'Writing portable packages' in the 'Writing R Extensions' manual.
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.3.6.2
Check: compiled code
Result: NOTE
    File ‘NeatMap/libs/NeatMap.so’:
     Found ‘_rand’, possibly from ‘rand’ (C)
     Object: ‘nMDS_R.o’
     Found ‘_srand’, possibly from ‘srand’ (C)
     Object: ‘nMDS_R.o’
    
    Compiled code should not call entry points which might terminate R nor
    write to stdout/stderr instead of to the console, nor use Fortran I/O
    nor system RNGs.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64

Version: 0.3.6.2
Check: whether package can be installed
Result: WARN
    Found the following significant warnings:
     Warning: 'rgl_init' failed, running with rgl.useNULL = TRUE
Flavor: r-oldrel-macos-x86_64