Last updated on 2020-09-30 18:47:51 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.5-0 | 6.09 | 128.42 | 134.51 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.5-0 | 4.36 | 92.98 | 97.34 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.5-0 | 163.53 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 0.5-0 | 94.14 | NOTE | |||
| r-devel-windows-ix86+x86_64 | 0.5-0 | 11.00 | 101.00 | 112.00 | OK | |
| r-patched-linux-x86_64 | 0.5-0 | 3.78 | 120.32 | 124.10 | ERROR | |
| r-patched-solaris-x86 | 0.5-0 | 227.20 | NOTE | |||
| r-release-linux-x86_64 | 0.5-0 | 3.73 | 120.53 | 124.26 | ERROR | |
| r-release-macos-x86_64 | 0.5-0 | NOTE | ||||
| r-release-windows-ix86+x86_64 | 0.5-0 | 12.00 | 99.00 | 111.00 | OK | |
| r-oldrel-macos-x86_64 | 0.5-0 | NOTE | ||||
| r-oldrel-windows-ix86+x86_64 | 0.5-0 | 9.00 | 104.00 | 113.00 | OK |
Version: 0.5-0
Check: tests
Result: ERROR
Running 'testthat.R' [81s/112s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(easyr)
>
> test_check("easyr")
easyr::ecopy does not work on unix.
easyr::ecopy does not work on unix.
easyr::ecopy does not work on unix.
-- 1. Failure: PDF read (@test_read.any.R#119) --------------------------------
read.any(test_file("test.pdf")) not equal to data.frame(...).
Attributes: < Component "row.names": Mean relative difference: 0.2 >
No matches found.
No matches found.
No matches found.
No matches found.
easyr::tonum: NAs were created. Returning the vector unchanged.
Problematic values include: [ 5'10 ]
trying URL 'http://cran.us.r-project.org/src/contrib/lazyeval_0.2.2.tar.gz'
Content type 'application/x-gzip' length 83482 bytes (81 KB)
==================================================
downloaded 81 KB
trying URL 'http://cran.us.r-project.org/src/contrib/rex_1.2.0.tar.gz'
Content type 'application/x-gzip' length 91925 bytes (89 KB)
==================================================
downloaded 89 KB
trying URL 'http://cran.us.r-project.org/src/contrib/httr_1.4.2.tar.gz'
Content type 'application/x-gzip' length 159950 bytes (156 KB)
==================================================
downloaded 156 KB
trying URL 'http://cran.us.r-project.org/src/contrib/abind_1.4-5.tar.gz'
Content type 'application/x-gzip' length 21810 bytes (21 KB)
==================================================
downloaded 21 KB
trying URL 'http://cran.us.r-project.org/src/contrib/covr_3.5.1.tar.gz'
Content type 'application/x-gzip' length 146686 bytes (143 KB)
==================================================
downloaded 143 KB
trying URL 'http://cran.us.r-project.org/src/contrib/doParallel_1.0.15.tar.gz'
Content type 'application/x-gzip' length 173578 bytes (169 KB)
==================================================
downloaded 169 KB
trying URL 'http://cran.us.r-project.org/src/contrib/foreach_1.5.0.tar.gz'
Content type 'application/x-gzip' length 87370 bytes (85 KB)
==================================================
downloaded 85 KB
trying URL 'http://cran.us.r-project.org/src/contrib/iterators_1.0.12.tar.gz'
Content type 'application/x-gzip' length 289201 bytes (282 KB)
==================================================
downloaded 282 KB
trying URL 'http://cran.us.r-project.org/src/contrib/itertools_0.1-3.tar.gz'
Content type 'application/x-gzip' length 21415 bytes (20 KB)
==================================================
downloaded 20 KB
trying URL 'http://cran.us.r-project.org/src/contrib/plyr_1.8.6.tar.gz'
Content type 'application/x-gzip' length 401191 bytes (391 KB)
==================================================
downloaded 391 KB
* installing *source* package 'lazyeval' ...
** package 'lazyeval' successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[1]: Entering directory '/tmp/Rtmp1oBsUT/R.INSTALL4f555fc94dfb/lazyeval/src'
clang-10 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O3 -Wall -pedantic -mtune=native -c expr.c -o expr.o
clang-10 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O3 -Wall -pedantic -mtune=native -c init.c -o init.o
clang-10 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O3 -Wall -pedantic -mtune=native -c interp.c -o interp.o
clang-10 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O3 -Wall -pedantic -mtune=native -c lazy.c -o lazy.o
clang-10 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O3 -Wall -pedantic -mtune=native -c name.c -o name.o
clang-10 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O3 -Wall -pedantic -mtune=native -c utils.c -o utils.o
clang-10 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o lazyeval.so expr.o init.o interp.o lazy.o name.o utils.o -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmp1oBsUT/R.INSTALL4f555fc94dfb/lazyeval/src'
make[1]: Entering directory '/tmp/Rtmp1oBsUT/R.INSTALL4f555fc94dfb/lazyeval/src'
make[1]: Leaving directory '/tmp/Rtmp1oBsUT/R.INSTALL4f555fc94dfb/lazyeval/src'
installing to /tmp/RtmpkiXIe2/RLIBS_5bbd74d7bdaf/00LOCK-lazyeval/00new/lazyeval/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (lazyeval)
* installing *source* package 'httr' ...
** package 'httr' successfully unpacked and MD5 sums checked
** using staged installation
** R
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (httr)
* installing *source* package 'abind' ...
** package 'abind' successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (abind)
* installing *source* package 'iterators' ...
** package 'iterators' successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (iterators)
* installing *source* package 'plyr' ...
** package 'plyr' successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[1]: Entering directory '/tmp/RtmpvwI9V2/R.INSTALL72784ab65d9f/plyr/src'
clang++-10 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/tmp/RtmpkiXIe2/RLIBS_5bbd74d7bdaf/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O3 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
clang-10 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/tmp/RtmpkiXIe2/RLIBS_5bbd74d7bdaf/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O3 -Wall -pedantic -mtune=native -c loop_apply.c -o loop_apply.o
clang++-10 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I'/tmp/RtmpkiXIe2/RLIBS_5bbd74d7bdaf/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O3 -Wall -pedantic -mtune=native -c split-numeric.cpp -o split-numeric.o
clang++-10 -std=gnu++11 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o plyr.so RcppExports.o loop_apply.o split-numeric.o -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpvwI9V2/R.INSTALL72784ab65d9f/plyr/src'
make[1]: Entering directory '/tmp/RtmpvwI9V2/R.INSTALL72784ab65d9f/plyr/src'
make[1]: Leaving directory '/tmp/RtmpvwI9V2/R.INSTALL72784ab65d9f/plyr/src'
installing to /tmp/RtmpkiXIe2/RLIBS_5bbd74d7bdaf/00LOCK-plyr/00new/plyr/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (plyr)
* installing *source* package 'rex' ...
** package 'rex' successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rex)
* installing *source* package 'foreach' ...
** package 'foreach' successfully unpacked and MD5 sums checked
** using staged installation
** R
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (foreach)
* installing *source* package 'itertools' ...
** package 'itertools' successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (itertools)
* installing *source* package 'covr' ...
** package 'covr' successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[1]: Entering directory '/tmp/RtmpC7KThm/R.INSTALL30fb5cec832e/covr/src'
clang-10 -I"/home/hornik/tmp/R.check/r-devel-clang/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O3 -Wall -pedantic -mtune=native -c reassign.c -o reassign.o
clang-10 -shared -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -Wl,-O1 -o covr.so reassign.o -L/home/hornik/tmp/R.check/r-devel-clang/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpC7KThm/R.INSTALL30fb5cec832e/covr/src'
make[1]: Entering directory '/tmp/RtmpC7KThm/R.INSTALL30fb5cec832e/covr/src'
make[1]: Leaving directory '/tmp/RtmpC7KThm/R.INSTALL30fb5cec832e/covr/src'
installing to /tmp/RtmpkiXIe2/RLIBS_5bbd74d7bdaf/00LOCK-covr/00new/covr/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (covr)
* installing *source* package 'doParallel' ...
** package 'doParallel' successfully unpacked and MD5 sums checked
** using staged installation
** R
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (doParallel)
The downloaded source packages are in
'/tmp/RtmpRqzYVf/downloaded_packages'
== testthat results ===========================================================
[ OK: 298 | SKIPPED: 1 | WARNINGS: 0 | FAILED: 1 ]
1. Failure: PDF read (@test_read.any.R#119)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.5-0
Check: tests
Result: ERROR
Running ‘testthat.R’ [57s/108s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(easyr)
>
> test_check("easyr")
easyr::ecopy does not work on unix.
easyr::ecopy does not work on unix.
easyr::ecopy does not work on unix.
── 1. Failure: PDF read (@test_read.any.R#119) ────────────────────────────────
read.any(test_file("test.pdf")) not equal to data.frame(...).
Attributes: < Component "row.names": Mean relative difference: 0.2 >
No matches found.
No matches found.
No matches found.
No matches found.
easyr::tonum: NAs were created. Returning the vector unchanged.
Problematic values include: [ 5'10 ]
trying URL 'http://cran.us.r-project.org/src/contrib/lazyeval_0.2.2.tar.gz'
Content type 'application/x-gzip' length 83482 bytes (81 KB)
==================================================
downloaded 81 KB
trying URL 'http://cran.us.r-project.org/src/contrib/rex_1.2.0.tar.gz'
Content type 'application/x-gzip' length 91925 bytes (89 KB)
==================================================
downloaded 89 KB
trying URL 'http://cran.us.r-project.org/src/contrib/httr_1.4.2.tar.gz'
Content type 'application/x-gzip' length 159950 bytes (156 KB)
==================================================
downloaded 156 KB
trying URL 'http://cran.us.r-project.org/src/contrib/abind_1.4-5.tar.gz'
Content type 'application/x-gzip' length 21810 bytes (21 KB)
==================================================
downloaded 21 KB
trying URL 'http://cran.us.r-project.org/src/contrib/covr_3.5.1.tar.gz'
Content type 'application/x-gzip' length 146686 bytes (143 KB)
==================================================
downloaded 143 KB
trying URL 'http://cran.us.r-project.org/src/contrib/doParallel_1.0.15.tar.gz'
Content type 'application/x-gzip' length 173578 bytes (169 KB)
==================================================
downloaded 169 KB
trying URL 'http://cran.us.r-project.org/src/contrib/foreach_1.5.0.tar.gz'
Content type 'application/x-gzip' length 87370 bytes (85 KB)
==================================================
downloaded 85 KB
trying URL 'http://cran.us.r-project.org/src/contrib/iterators_1.0.12.tar.gz'
Content type 'application/x-gzip' length 289201 bytes (282 KB)
==================================================
downloaded 282 KB
trying URL 'http://cran.us.r-project.org/src/contrib/itertools_0.1-3.tar.gz'
Content type 'application/x-gzip' length 21415 bytes (20 KB)
==================================================
downloaded 20 KB
trying URL 'http://cran.us.r-project.org/src/contrib/plyr_1.8.6.tar.gz'
Content type 'application/x-gzip' length 401191 bytes (391 KB)
==================================================
downloaded 391 KB
* installing *source* package ‘lazyeval’ ...
** package ‘lazyeval’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpyE6E2Z/R.INSTALL371c57e234ea/lazyeval/src'
gcc-10 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c expr.c -o expr.o
gcc-10 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c init.c -o init.o
gcc-10 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c interp.c -o interp.o
gcc-10 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c lazy.c -o lazy.o
gcc-10 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c name.c -o name.o
gcc-10 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c utils.c -o utils.o
gcc-10 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o lazyeval.so expr.o init.o interp.o lazy.o name.o utils.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpyE6E2Z/R.INSTALL371c57e234ea/lazyeval/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpyE6E2Z/R.INSTALL371c57e234ea/lazyeval/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpyE6E2Z/R.INSTALL371c57e234ea/lazyeval/src'
installing to /home/hornik/tmp/scratch/RtmpM2dVG5/RLIBS_13295fceabba/00LOCK-lazyeval/00new/lazyeval/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (lazyeval)
* installing *source* package ‘httr’ ...
** package ‘httr’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (httr)
* installing *source* package ‘abind’ ...
** package ‘abind’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (abind)
* installing *source* package ‘iterators’ ...
** package ‘iterators’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (iterators)
* installing *source* package ‘plyr’ ...
** package ‘plyr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmplPL0uW/R.INSTALL6a0b7fdcdae/plyr/src'
g++-10 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/RtmpM2dVG5/RLIBS_13295fceabba/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
gcc-10 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/RtmpM2dVG5/RLIBS_13295fceabba/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c loop_apply.c -o loop_apply.o
g++-10 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/scratch/RtmpM2dVG5/RLIBS_13295fceabba/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c split-numeric.cpp -o split-numeric.o
g++-10 -std=gnu++11 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o plyr.so RcppExports.o loop_apply.o split-numeric.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmplPL0uW/R.INSTALL6a0b7fdcdae/plyr/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmplPL0uW/R.INSTALL6a0b7fdcdae/plyr/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmplPL0uW/R.INSTALL6a0b7fdcdae/plyr/src'
installing to /home/hornik/tmp/scratch/RtmpM2dVG5/RLIBS_13295fceabba/00LOCK-plyr/00new/plyr/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (plyr)
* installing *source* package ‘rex’ ...
** package ‘rex’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rex)
* installing *source* package ‘foreach’ ...
** package ‘foreach’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (foreach)
* installing *source* package ‘itertools’ ...
** package ‘itertools’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (itertools)
* installing *source* package ‘covr’ ...
** package ‘covr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp4tqcwb/R.INSTALL41c34f43698f/covr/src'
gcc-10 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c reassign.c -o reassign.o
gcc-10 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o covr.so reassign.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp4tqcwb/R.INSTALL41c34f43698f/covr/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp4tqcwb/R.INSTALL41c34f43698f/covr/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp4tqcwb/R.INSTALL41c34f43698f/covr/src'
installing to /home/hornik/tmp/scratch/RtmpM2dVG5/RLIBS_13295fceabba/00LOCK-covr/00new/covr/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (covr)
* installing *source* package ‘doParallel’ ...
** package ‘doParallel’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (doParallel)
The downloaded source packages are in
'/home/hornik/tmp/scratch/RtmpUa0vnM/downloaded_packages'
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 298 | SKIPPED: 1 | WARNINGS: 0 | FAILED: 1 ]
1. Failure: PDF read (@test_read.any.R#119)
Error: testthat unit tests failed
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.5-0
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from: ‘rprojroot’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-macos-x86_64, r-oldrel-macos-x86_64
Version: 0.5-0
Check: tests
Result: ERROR
Running ‘testthat.R’ [76s/107s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(easyr)
>
> test_check("easyr")
easyr::ecopy does not work on unix.
easyr::ecopy does not work on unix.
easyr::ecopy does not work on unix.
── 1. Failure: PDF read (@test_read.any.R#119) ────────────────────────────────
read.any(test_file("test.pdf")) not equal to data.frame(...).
Attributes: < Component "row.names": Mean relative difference: 0.2 >
No matches found.
No matches found.
No matches found.
No matches found.
easyr::tonum: NAs were created. Returning the vector unchanged.
Problematic values include: [ 5'10 ]
trying URL 'http://cran.us.r-project.org/src/contrib/lazyeval_0.2.2.tar.gz'
Content type 'application/x-gzip' length 83482 bytes (81 KB)
==================================================
downloaded 81 KB
trying URL 'http://cran.us.r-project.org/src/contrib/rex_1.2.0.tar.gz'
Content type 'application/x-gzip' length 91925 bytes (89 KB)
==================================================
downloaded 89 KB
trying URL 'http://cran.us.r-project.org/src/contrib/httr_1.4.2.tar.gz'
Content type 'application/x-gzip' length 159950 bytes (156 KB)
==================================================
downloaded 156 KB
trying URL 'http://cran.us.r-project.org/src/contrib/abind_1.4-5.tar.gz'
Content type 'application/x-gzip' length 21810 bytes (21 KB)
==================================================
downloaded 21 KB
trying URL 'http://cran.us.r-project.org/src/contrib/covr_3.5.1.tar.gz'
Content type 'application/x-gzip' length 146686 bytes (143 KB)
==================================================
downloaded 143 KB
trying URL 'http://cran.us.r-project.org/src/contrib/doParallel_1.0.15.tar.gz'
Content type 'application/x-gzip' length 173578 bytes (169 KB)
==================================================
downloaded 169 KB
trying URL 'http://cran.us.r-project.org/src/contrib/foreach_1.5.0.tar.gz'
Content type 'application/x-gzip' length 87370 bytes (85 KB)
==================================================
downloaded 85 KB
trying URL 'http://cran.us.r-project.org/src/contrib/iterators_1.0.12.tar.gz'
Content type 'application/x-gzip' length 289201 bytes (282 KB)
==================================================
downloaded 282 KB
trying URL 'http://cran.us.r-project.org/src/contrib/itertools_0.1-3.tar.gz'
Content type 'application/x-gzip' length 21415 bytes (20 KB)
==================================================
downloaded 20 KB
trying URL 'http://cran.us.r-project.org/src/contrib/plyr_1.8.6.tar.gz'
Content type 'application/x-gzip' length 401191 bytes (391 KB)
==================================================
downloaded 391 KB
* installing *source* package ‘lazyeval’ ...
** package ‘lazyeval’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[1]: Entering directory '/tmp/Rtmp3qeUzM/R.INSTALL41e5e600c4e/lazyeval/src'
gcc-10 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c expr.c -o expr.o
gcc-10 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c init.c -o init.o
gcc-10 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c interp.c -o interp.o
gcc-10 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c lazy.c -o lazy.o
gcc-10 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c name.c -o name.o
gcc-10 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c utils.c -o utils.o
gcc-10 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o lazyeval.so expr.o init.o interp.o lazy.o name.o utils.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmp3qeUzM/R.INSTALL41e5e600c4e/lazyeval/src'
make[1]: Entering directory '/tmp/Rtmp3qeUzM/R.INSTALL41e5e600c4e/lazyeval/src'
make[1]: Leaving directory '/tmp/Rtmp3qeUzM/R.INSTALL41e5e600c4e/lazyeval/src'
installing to /tmp/RtmpGLAgr4/RLIBS_50114edd465f/00LOCK-lazyeval/00new/lazyeval/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (lazyeval)
* installing *source* package ‘httr’ ...
** package ‘httr’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (httr)
* installing *source* package ‘abind’ ...
** package ‘abind’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (abind)
* installing *source* package ‘iterators’ ...
** package ‘iterators’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (iterators)
* installing *source* package ‘plyr’ ...
** package ‘plyr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[1]: Entering directory '/tmp/Rtmp8h0mBF/R.INSTALL648e235386dc/plyr/src'
g++-10 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/tmp/RtmpGLAgr4/RLIBS_50114edd465f/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
gcc-10 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/tmp/RtmpGLAgr4/RLIBS_50114edd465f/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c loop_apply.c -o loop_apply.o
g++-10 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I'/tmp/RtmpGLAgr4/RLIBS_50114edd465f/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c split-numeric.cpp -o split-numeric.o
g++-10 -std=gnu++11 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o plyr.so RcppExports.o loop_apply.o split-numeric.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmp8h0mBF/R.INSTALL648e235386dc/plyr/src'
make[1]: Entering directory '/tmp/Rtmp8h0mBF/R.INSTALL648e235386dc/plyr/src'
make[1]: Leaving directory '/tmp/Rtmp8h0mBF/R.INSTALL648e235386dc/plyr/src'
installing to /tmp/RtmpGLAgr4/RLIBS_50114edd465f/00LOCK-plyr/00new/plyr/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (plyr)
* installing *source* package ‘rex’ ...
** package ‘rex’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rex)
* installing *source* package ‘foreach’ ...
** package ‘foreach’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (foreach)
* installing *source* package ‘itertools’ ...
** package ‘itertools’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (itertools)
* installing *source* package ‘covr’ ...
** package ‘covr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[1]: Entering directory '/tmp/RtmpctRw52/R.INSTALL244215c6ff34/covr/src'
gcc-10 -I"/home/hornik/tmp/R.check/r-patched-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c reassign.c -o reassign.o
gcc-10 -shared -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -Wl,-O1 -o covr.so reassign.o -L/home/hornik/tmp/R.check/r-patched-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpctRw52/R.INSTALL244215c6ff34/covr/src'
make[1]: Entering directory '/tmp/RtmpctRw52/R.INSTALL244215c6ff34/covr/src'
make[1]: Leaving directory '/tmp/RtmpctRw52/R.INSTALL244215c6ff34/covr/src'
installing to /tmp/RtmpGLAgr4/RLIBS_50114edd465f/00LOCK-covr/00new/covr/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (covr)
* installing *source* package ‘doParallel’ ...
** package ‘doParallel’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (doParallel)
The downloaded source packages are in
'/tmp/RtmpFsDHok/downloaded_packages'
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 298 | SKIPPED: 1 | WARNINGS: 0 | FAILED: 1 ]
1. Failure: PDF read (@test_read.any.R#119)
Error: testthat unit tests failed
Execution halted
Flavor: r-patched-linux-x86_64
Version: 0.5-0
Check: tests
Result: ERROR
Running ‘testthat.R’ [76s/108s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(easyr)
>
> test_check("easyr")
easyr::ecopy does not work on unix.
easyr::ecopy does not work on unix.
easyr::ecopy does not work on unix.
── 1. Failure: PDF read (@test_read.any.R#119) ────────────────────────────────
read.any(test_file("test.pdf")) not equal to data.frame(...).
Attributes: < Component "row.names": Mean relative difference: 0.2 >
No matches found.
No matches found.
No matches found.
No matches found.
easyr::tonum: NAs were created. Returning the vector unchanged.
Problematic values include: [ 5'10 ]
trying URL 'http://cran.us.r-project.org/src/contrib/lazyeval_0.2.2.tar.gz'
Content type 'application/x-gzip' length 83482 bytes (81 KB)
==================================================
downloaded 81 KB
trying URL 'http://cran.us.r-project.org/src/contrib/rex_1.2.0.tar.gz'
Content type 'application/x-gzip' length 91925 bytes (89 KB)
==================================================
downloaded 89 KB
trying URL 'http://cran.us.r-project.org/src/contrib/httr_1.4.2.tar.gz'
Content type 'application/x-gzip' length 159950 bytes (156 KB)
==================================================
downloaded 156 KB
trying URL 'http://cran.us.r-project.org/src/contrib/abind_1.4-5.tar.gz'
Content type 'application/x-gzip' length 21810 bytes (21 KB)
==================================================
downloaded 21 KB
trying URL 'http://cran.us.r-project.org/src/contrib/covr_3.5.1.tar.gz'
Content type 'application/x-gzip' length 146686 bytes (143 KB)
==================================================
downloaded 143 KB
trying URL 'http://cran.us.r-project.org/src/contrib/doParallel_1.0.15.tar.gz'
Content type 'application/x-gzip' length 173578 bytes (169 KB)
==================================================
downloaded 169 KB
trying URL 'http://cran.us.r-project.org/src/contrib/foreach_1.5.0.tar.gz'
Content type 'application/x-gzip' length 87370 bytes (85 KB)
==================================================
downloaded 85 KB
trying URL 'http://cran.us.r-project.org/src/contrib/iterators_1.0.12.tar.gz'
Content type 'application/x-gzip' length 289201 bytes (282 KB)
==================================================
downloaded 282 KB
trying URL 'http://cran.us.r-project.org/src/contrib/itertools_0.1-3.tar.gz'
Content type 'application/x-gzip' length 21415 bytes (20 KB)
==================================================
downloaded 20 KB
trying URL 'http://cran.us.r-project.org/src/contrib/plyr_1.8.6.tar.gz'
Content type 'application/x-gzip' length 401191 bytes (391 KB)
==================================================
downloaded 391 KB
* installing *source* package ‘lazyeval’ ...
** package ‘lazyeval’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[1]: Entering directory '/tmp/RtmpLeayKN/R.INSTALL36ca4dee6f7e/lazyeval/src'
gcc-10 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c expr.c -o expr.o
gcc-10 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c init.c -o init.o
gcc-10 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c interp.c -o interp.o
gcc-10 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c lazy.c -o lazy.o
gcc-10 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c name.c -o name.o
gcc-10 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c utils.c -o utils.o
gcc-10 -shared -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -Wl,-O1 -o lazyeval.so expr.o init.o interp.o lazy.o name.o utils.o -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/RtmpLeayKN/R.INSTALL36ca4dee6f7e/lazyeval/src'
make[1]: Entering directory '/tmp/RtmpLeayKN/R.INSTALL36ca4dee6f7e/lazyeval/src'
make[1]: Leaving directory '/tmp/RtmpLeayKN/R.INSTALL36ca4dee6f7e/lazyeval/src'
installing to /tmp/RtmpERd1or/RLIBS_434616791b53/00LOCK-lazyeval/00new/lazyeval/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (lazyeval)
* installing *source* package ‘httr’ ...
** package ‘httr’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (httr)
* installing *source* package ‘abind’ ...
** package ‘abind’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (abind)
* installing *source* package ‘iterators’ ...
** package ‘iterators’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (iterators)
* installing *source* package ‘plyr’ ...
** package ‘plyr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[1]: Entering directory '/tmp/Rtmpl6oPYx/R.INSTALL591473376363/plyr/src'
g++-10 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I'/tmp/RtmpERd1or/RLIBS_434616791b53/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o
gcc-10 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I'/tmp/RtmpERd1or/RLIBS_434616791b53/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c loop_apply.c -o loop_apply.o
g++-10 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I'/tmp/RtmpERd1or/RLIBS_434616791b53/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c split-numeric.cpp -o split-numeric.o
g++-10 -std=gnu++11 -shared -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -Wl,-O1 -o plyr.so RcppExports.o loop_apply.o split-numeric.o -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmpl6oPYx/R.INSTALL591473376363/plyr/src'
make[1]: Entering directory '/tmp/Rtmpl6oPYx/R.INSTALL591473376363/plyr/src'
make[1]: Leaving directory '/tmp/Rtmpl6oPYx/R.INSTALL591473376363/plyr/src'
installing to /tmp/RtmpERd1or/RLIBS_434616791b53/00LOCK-plyr/00new/plyr/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (plyr)
* installing *source* package ‘rex’ ...
** package ‘rex’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rex)
* installing *source* package ‘foreach’ ...
** package ‘foreach’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (foreach)
* installing *source* package ‘itertools’ ...
** package ‘itertools’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (itertools)
* installing *source* package ‘covr’ ...
** package ‘covr’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[1]: Entering directory '/tmp/Rtmp9j7xnY/R.INSTALL19ec7c477cba/covr/src'
gcc-10 -I"/home/hornik/tmp/R.check/r-release-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=2 -fpic -g -O2 -Wall -pedantic -mtune=native -c reassign.c -o reassign.o
gcc-10 -shared -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -Wl,-O1 -o covr.so reassign.o -L/home/hornik/tmp/R.check/r-release-gcc/Work/build/lib -lR
make[1]: Leaving directory '/tmp/Rtmp9j7xnY/R.INSTALL19ec7c477cba/covr/src'
make[1]: Entering directory '/tmp/Rtmp9j7xnY/R.INSTALL19ec7c477cba/covr/src'
make[1]: Leaving directory '/tmp/Rtmp9j7xnY/R.INSTALL19ec7c477cba/covr/src'
installing to /tmp/RtmpERd1or/RLIBS_434616791b53/00LOCK-covr/00new/covr/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (covr)
* installing *source* package ‘doParallel’ ...
** package ‘doParallel’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** demo
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (doParallel)
The downloaded source packages are in
'/tmp/RtmpkvjF07/downloaded_packages'
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 298 | SKIPPED: 1 | WARNINGS: 0 | FAILED: 1 ]
1. Failure: PDF read (@test_read.any.R#119)
Error: testthat unit tests failed
Execution halted
Flavor: r-release-linux-x86_64