Last updated on 2020-10-18 07:47:36 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.0.5 | 2.69 | 64.32 | 67.01 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 0.0.5 | 2.33 | 47.94 | 50.27 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 0.0.5 | 87.60 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 0.0.5 | 77.34 | NOTE | |||
| r-devel-windows-ix86+x86_64 | 0.0.5 | 5.00 | 65.00 | 70.00 | OK | |
| r-patched-linux-x86_64 | 0.0.5 | 2.92 | 60.70 | 63.62 | NOTE | |
| r-patched-solaris-x86 | 0.0.5 | 77.30 | ERROR | |||
| r-release-linux-x86_64 | 0.0.5 | 2.83 | 61.62 | 64.45 | NOTE | |
| r-release-macos-x86_64 | 0.0.5 | OK | ||||
| r-release-windows-ix86+x86_64 | 0.0.5 | 5.00 | 63.00 | 68.00 | OK | |
| r-oldrel-macos-x86_64 | 0.0.5 | OK | ||||
| r-oldrel-windows-ix86+x86_64 | 0.0.5 | 4.00 | 71.00 | 75.00 | OK |
Version: 0.0.5
Check: package dependencies
Result: NOTE
Package which this enhances but not available for checking: 'MRCE'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64
Version: 0.0.5
Check: examples
Result: ERROR
Running examples in ‘joinet-Ex.R’ failed
The error most likely occurred in:
> ### Name: coef.joinet
> ### Title: Extract Coefficients
> ### Aliases: coef.joinet
>
> ### ** Examples
>
> n <- 50; p <- 100; q <- 3
> X <- matrix(rnorm(n*p),nrow=n,ncol=p)
> Y <- replicate(n=q,expr=rnorm(n=n,mean=rowSums(X[,1:5])))
> object <- joinet(Y=Y,X=X)
Error in approx(lambda, seq(lambda), sfrac) :
need at least two non-NA values to interpolate
Calls: joinet ... NextMethod -> predict.glmnet -> lambda.interp -> approx
Execution halted
Flavor: r-patched-solaris-x86
Version: 0.0.5
Check: tests
Result: ERROR
Running ‘testthat.R’ [8s/11s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(joinet)
>
> testthat::test_check(package="joinet",stop_on_warning=FALSE)
── 1. Error: (unknown) (@test.R#24) ───────────────────────────────────────────
need at least two non-NA values to interpolate
Backtrace:
1. joinet::joinet(...)
2. glmnet::cv.glmnet(...)
3. glmnet:::cv.glmnet.raw(...)
5. glmnet:::buildPredmat.default(...)
9. glmnet::predict.glmnet(...)
10. glmnet:::lambda.interp(lambda, s)
11. stats::approx(lambda, seq(lambda), sfrac)
══ testthat results ═══════════════════════════════════════════════════════════
[ OK: 3 | SKIPPED: 0 | WARNINGS: 0 | FAILED: 1 ]
1. Error: (unknown) (@test.R#24)
Error: testthat unit tests failed
Execution halted
Flavor: r-patched-solaris-x86
Version: 0.0.5
Check: re-building of vignette outputs
Result: WARN
Error(s) in re-building vignettes:
...
--- re-building ‘article.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
--- finished re-building ‘article.Rmd’
--- re-building ‘joinet.Rmd’ using rmarkdown
Warning in engine$weave(file, quiet = quiet, encoding = enc) :
Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
Quitting from lines 105-106 (joinet.Rmd)
Error: processing vignette 'joinet.Rmd' failed with diagnostics:
need at least two non-NA values to interpolate
--- failed re-building ‘joinet.Rmd’
SUMMARY: processing the following file failed:
‘joinet.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-patched-solaris-x86