CRAN Package Check Results for Package XMRF

Last updated on 2020-10-22 05:48:14 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0 5.24 39.21 44.45 NOTE
r-devel-linux-x86_64-debian-gcc 1.0 3.56 30.01 33.57 NOTE
r-devel-linux-x86_64-fedora-clang 1.0 61.01 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0 51.63 NOTE
r-devel-windows-ix86+x86_64 1.0 10.00 81.00 91.00 NOTE
r-patched-linux-x86_64 1.0 4.78 37.75 42.53 NOTE
r-patched-solaris-x86 1.0 78.80 NOTE
r-release-linux-x86_64 1.0 4.50 37.64 42.14 NOTE
r-release-macos-x86_64 1.0 NOTE
r-release-windows-ix86+x86_64 1.0 9.00 79.00 88.00 NOTE
r-oldrel-macos-x86_64 1.0 NOTE
r-oldrel-windows-ix86+x86_64 1.0 9.00 78.00 87.00 NOTE

Check Details

Version: 1.0
Check: R code for possible problems
Result: NOTE
    LPGM: no visible global function definition for 'flush.console'
    PGM: no visible global function definition for 'flush.console'
    PGM.path.neighborhood: no visible global function definition for
     'runif'
    PGMSim: no visible global function definition for 'rpois'
    PGMSim: no visible global function definition for 'par'
    WPGMSim: no visible global function definition for 'rpois'
    XMRF.Sim: no visible global function definition for 'cov2cor'
    XMRF.Sim: no visible global function definition for 'rbinom'
    XMRF.Sim: no visible global function definition for 'rnorm'
    glm.generic: no visible global function definition for 'flush.console'
    mymult: no visible global function definition for 'rmultinom'
    plot.GMS: no visible global function definition for 'pdf'
    plot.GMS: no visible global function definition for 'dev.off'
    plotNet: no visible global function definition for 'pdf'
    plotNet: no visible global function definition for 'dev.off'
    print.GMS: no visible global function definition for 'str'
    processSeq: no visible binding for global variable 'quantile'
    processSeq: no visible binding for global variable 'var'
    processSeq: no visible global function definition for 'ks.test'
    rmpois : <anonymous>: no visible global function definition for 'rpois'
    Undefined global functions or variables:
     cov2cor dev.off flush.console ks.test par pdf quantile rbinom
     rmultinom rnorm rpois runif str var
    Consider adding
     importFrom("grDevices", "dev.off", "pdf")
     importFrom("graphics", "par")
     importFrom("stats", "cov2cor", "ks.test", "quantile", "rbinom",
     "rmultinom", "rnorm", "rpois", "runif", "var")
     importFrom("utils", "flush.console", "str")
    to your NAMESPACE file.
    
    Possibly missing '()' after 'return' in the following function:
     'adj2A'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.0
Check: for non-standard things in the check directory
Result: NOTE
    Found the following files/directories:
     'ggm.fit.net.pdf'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64

Version: 1.0
Check: compiled code
Result: NOTE
    File ‘XMRF/libs/XMRF.so’:
     Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
    
    It is good practice to register native routines and to disable symbol
    search.
    
    See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 1.0
Check: R code for possible problems
Result: NOTE
    LPGM: no visible global function definition for 'flush.console'
    PGM: no visible global function definition for 'flush.console'
    PGM.path.neighborhood: no visible global function definition for
     'runif'
    PGMSim: no visible global function definition for 'rpois'
    PGMSim: no visible global function definition for 'par'
    WPGMSim: no visible global function definition for 'rpois'
    XMRF.Sim: no visible global function definition for 'cov2cor'
    XMRF.Sim: no visible global function definition for 'rbinom'
    XMRF.Sim: no visible global function definition for 'rnorm'
    glm.generic: no visible global function definition for 'flush.console'
    mymult: no visible global function definition for 'rmultinom'
    plot.GMS: no visible global function definition for 'pdf'
    plot.GMS: no visible global function definition for 'dev.off'
    plotNet: no visible global function definition for 'pdf'
    plotNet: no visible global function definition for 'dev.off'
    print.GMS: no visible global function definition for 'str'
    processSeq: no visible binding for global variable 'quantile'
    processSeq: no visible binding for global variable 'var'
    processSeq: no visible global function definition for 'ks.test'
    rmpois : <anonymous>: no visible global function definition for 'rpois'
    Undefined global functions or variables:
     cov2cor dev.off flush.console ks.test par pdf quantile rbinom
     rmultinom rnorm rpois runif str var
    Consider adding
     importFrom("grDevices", "dev.off", "pdf")
     importFrom("graphics", "par")
     importFrom("stats", "cov2cor", "ks.test", "quantile", "rbinom",
     "rmultinom", "rnorm", "rpois", "runif", "var")
     importFrom("utils", "flush.console", "str")
    to your NAMESPACE file.
Flavors: r-devel-windows-ix86+x86_64, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64