CRAN Package Check Results for Package parsemsf

Last updated on 2020-11-17 06:46:59 CET.

Check Details

Version: 0.1.1
Check: examples
Result: ERROR
    Running examples in 'parsemsf-Ex.R' failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: make_area_table
    > ### Title: Make a table of peptide areas
    > ### Aliases: make_area_table
    >
    > ### ** Examples
    >
    > make_area_table(parsemsf_example("test_db.msf"))
    Warning: `select_()` is deprecated as of dplyr 0.7.0.
    Please use `select()` instead.
    This warning is displayed once every 8 hours.
    Call `lifecycle::last_warnings()` to see where this warning was generated.
    Error in UseMethod("select_") :
     no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
    Calls: make_area_table ... _fseq -> freduce -> withVisible -> <Anonymous> -> select_
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.1.1
Check: tests
Result: ERROR
     Running 'testthat.R' [3s/3s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(parsemsf)
     >
     > test_check("parsemsf")
     -- Warning (test_make_area_table.R:16:3): make_area_table creates a data frame w
     `select_()` is deprecated as of dplyr 0.7.0.
     Please use `select()` instead.
     This warning is displayed once every 8 hours.
     Call `lifecycle::last_warnings()` to see where this warning was generated.
    
     -- ERROR (test_make_area_table.R:16:3): make_area_table creates a data frame wit
     Error: no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
     Backtrace:
     x
     1. +-testthat::expect_equal(...) test_make_area_table.R:16:2
     2. | \-testthat::quasi_label(enquo(object), label, arg = "object")
     3. | \-rlang::eval_bare(expr, quo_get_env(quo))
     4. +-base::colnames(make_area_table(parsemsf_example("test_db.msf")))
     5. | \-base::is.data.frame(x)
     6. \-parsemsf::make_area_table(parsemsf_example("test_db.msf"))
     7. \-`%>%`(...)
     8. +-base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
     9. \-base::eval(quote(`_fseq`(`_lhs`)), env, env)
     10. \-base::eval(quote(`_fseq`(`_lhs`)), env, env)
     11. \-parsemsf:::`_fseq`(`_lhs`)
     12. \-magrittr::freduce(value, `_function_list`)
     13. +-base::withVisible(function_list[[k]](value))
     14. \-function_list[[k]](value)
     15. \-dplyr::select_(...)
    
     -- ERROR (test_make_pep_table.R:13:3): make_pep_table creates a data frame with
     Error: no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
     Backtrace:
     x
     1. +-testthat::expect_equal(...) test_make_pep_table.R:13:2
     2. | \-testthat::quasi_label(enquo(object), label, arg = "object")
     3. | \-rlang::eval_bare(expr, quo_get_env(quo))
     4. +-base::colnames(make_pep_table(parsemsf_example("test_db.msf")))
     5. | \-base::is.data.frame(x)
     6. \-parsemsf::make_pep_table(parsemsf_example("test_db.msf"))
     7. \-tbl(my_db, "SchemaInfo") %>% select_(~SoftwareVersion) %>% collect()
     8. +-base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
     9. \-base::eval(quote(`_fseq`(`_lhs`)), env, env)
     10. \-base::eval(quote(`_fseq`(`_lhs`)), env, env)
     11. \-parsemsf:::`_fseq`(`_lhs`)
     12. \-magrittr::freduce(value, `_function_list`)
     13. \-function_list[[i]](value)
     14. \-dplyr::select_(., ~SoftwareVersion)
    
     -- ERROR (test_map_peptides.R:16:3): map_peptides creates a data frame with the
     Error: no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
     Backtrace:
     x
     1. +-testthat::expect_equal(...) test_map_peptides.R:16:2
     2. | \-testthat::quasi_label(enquo(object), label, arg = "object")
     3. | \-rlang::eval_bare(expr, quo_get_env(quo))
     4. +-base::colnames(map_peptides(parsemsf_example("test_db.msf")))
     5. | \-base::is.data.frame(x)
     6. \-parsemsf::map_peptides(parsemsf_example("test_db.msf"))
     7. +-`%>%`(...)
     8. | \-base::eval(lhs, parent, parent)
     9. | \-base::eval(lhs, parent, parent)
     10. \-parsemsf::make_pep_table(msf_file, min_conf, collapse = FALSE)
     11. \-tbl(my_db, "SchemaInfo") %>% select_(~SoftwareVersion) %>% collect()
     12. +-base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
     13. \-base::eval(quote(`_fseq`(`_lhs`)), env, env)
     14. \-base::eval(quote(`_fseq`(`_lhs`)), env, env)
     15. \-parsemsf:::`_fseq`(`_lhs`)
     16. \-magrittr::freduce(value, `_function_list`)
     17. \-function_list[[i]](value)
     18. \-dplyr::select_(., ~SoftwareVersion)
    
     -- ERROR (???): (code run outside of `test_that()`) ----------------------------
     Error: no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
     Backtrace:
     x
     1. \-parsemsf::make_area_table(parsemsf_example("test_db.msf"))
     2. \-`%>%`(...)
     3. +-base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
     4. \-base::eval(quote(`_fseq`(`_lhs`)), env, env)
     5. \-base::eval(quote(`_fseq`(`_lhs`)), env, env)
     6. \-parsemsf:::`_fseq`(`_lhs`)
     7. \-magrittr::freduce(value, `_function_list`)
     8. +-base::withVisible(function_list[[k]](value))
     9. \-function_list[[k]](value)
     10. \-dplyr::select_(...)
    
     == testthat results ===========================================================
     Warning (test_make_area_table.R:16:3): make_area_table creates a data frame with the correct column names
     ERROR (test_make_area_table.R:16:3): make_area_table creates a data frame with the correct column names
     ERROR (test_make_pep_table.R:13:3): make_pep_table creates a data frame with the correct column names
     ERROR (test_map_peptides.R:16:3): map_peptides creates a data frame with the correct column names
     ERROR (???): (code run outside of `test_that()`)
    
     [ FAIL 4 | WARN 1 | SKIP 0 | PASS 0 ]
     Error: Test failures
     Execution halted
Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.1.1
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building 'introduction.Rmd' using rmarkdown
    Quitting from lines 48-53 (introduction.Rmd)
    Error: processing vignette 'introduction.Rmd' failed with diagnostics:
    no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
    --- failed re-building 'introduction.Rmd'
    
    SUMMARY: processing the following file failed:
     'introduction.Rmd'
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.1.1
Check: tests
Result: ERROR
     Running ‘testthat.R’ [2s/3s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(parsemsf)
     >
     > test_check("parsemsf")
     ── Warning (test_make_area_table.R:16:3): make_area_table creates a data frame w
     `select_()` is deprecated as of dplyr 0.7.0.
     Please use `select()` instead.
     This warning is displayed once every 8 hours.
     Call `lifecycle::last_warnings()` to see where this warning was generated.
    
     ── ERROR (test_make_area_table.R:16:3): make_area_table creates a data frame wit
     Error: no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
     Backtrace:
     █
     1. ├─testthat::expect_equal(...) test_make_area_table.R:16:2
     2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
     3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
     4. ├─base::colnames(make_area_table(parsemsf_example("test_db.msf")))
     5. │ └─base::is.data.frame(x)
     6. └─parsemsf::make_area_table(parsemsf_example("test_db.msf"))
     7. └─`%>%`(...)
     8. ├─base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
     9. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     10. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     11. └─parsemsf:::`_fseq`(`_lhs`)
     12. └─magrittr::freduce(value, `_function_list`)
     13. ├─base::withVisible(function_list[[k]](value))
     14. └─function_list[[k]](value)
     15. └─dplyr::select_(...)
    
     ── ERROR (test_make_pep_table.R:13:3): make_pep_table creates a data frame with
     Error: no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
     Backtrace:
     █
     1. ├─testthat::expect_equal(...) test_make_pep_table.R:13:2
     2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
     3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
     4. ├─base::colnames(make_pep_table(parsemsf_example("test_db.msf")))
     5. │ └─base::is.data.frame(x)
     6. └─parsemsf::make_pep_table(parsemsf_example("test_db.msf"))
     7. └─tbl(my_db, "SchemaInfo") %>% select_(~SoftwareVersion) %>% collect()
     8. ├─base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
     9. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     10. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     11. └─parsemsf:::`_fseq`(`_lhs`)
     12. └─magrittr::freduce(value, `_function_list`)
     13. └─function_list[[i]](value)
     14. └─dplyr::select_(., ~SoftwareVersion)
    
     ── ERROR (test_map_peptides.R:16:3): map_peptides creates a data frame with the
     Error: no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
     Backtrace:
     █
     1. ├─testthat::expect_equal(...) test_map_peptides.R:16:2
     2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
     3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
     4. ├─base::colnames(map_peptides(parsemsf_example("test_db.msf")))
     5. │ └─base::is.data.frame(x)
     6. └─parsemsf::map_peptides(parsemsf_example("test_db.msf"))
     7. ├─`%>%`(...)
     8. │ └─base::eval(lhs, parent, parent)
     9. │ └─base::eval(lhs, parent, parent)
     10. └─parsemsf::make_pep_table(msf_file, min_conf, collapse = FALSE)
     11. └─tbl(my_db, "SchemaInfo") %>% select_(~SoftwareVersion) %>% collect()
     12. ├─base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
     13. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     14. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     15. └─parsemsf:::`_fseq`(`_lhs`)
     16. └─magrittr::freduce(value, `_function_list`)
     17. └─function_list[[i]](value)
     18. └─dplyr::select_(., ~SoftwareVersion)
    
     ── ERROR (???): (code run outside of `test_that()`) ────────────────────────────
     Error: no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
     Backtrace:
     █
     1. └─parsemsf::make_area_table(parsemsf_example("test_db.msf"))
     2. └─`%>%`(...)
     3. ├─base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
     4. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     5. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     6. └─parsemsf:::`_fseq`(`_lhs`)
     7. └─magrittr::freduce(value, `_function_list`)
     8. ├─base::withVisible(function_list[[k]](value))
     9. └─function_list[[k]](value)
     10. └─dplyr::select_(...)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     Warning (test_make_area_table.R:16:3): make_area_table creates a data frame with the correct column names
     ERROR (test_make_area_table.R:16:3): make_area_table creates a data frame with the correct column names
     ERROR (test_make_pep_table.R:13:3): make_pep_table creates a data frame with the correct column names
     ERROR (test_map_peptides.R:16:3): map_peptides creates a data frame with the correct column names
     ERROR (???): (code run outside of `test_that()`)
    
     [ FAIL 4 | WARN 1 | SKIP 0 | PASS 0 ]
     Error: Test failures
     Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.1.1
Check: dependencies in R code
Result: NOTE
    Namespace in Imports field not imported from: ‘dbplyr’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-solaris-x86, r-release-macos-x86_64, r-oldrel-macos-x86_64

Version: 0.1.1
Check: examples
Result: ERROR
    Running examples in ‘parsemsf-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: make_area_table
    > ### Title: Make a table of peptide areas
    > ### Aliases: make_area_table
    >
    > ### ** Examples
    >
    > make_area_table(parsemsf_example("test_db.msf"))
    Warning: `select_()` is deprecated as of dplyr 0.7.0.
    Please use `select()` instead.
    This warning is displayed once every 8 hours.
    Call `lifecycle::last_warnings()` to see where this warning was generated.
    Error in UseMethod("select_") :
     no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
    Calls: make_area_table ... _fseq -> freduce -> withVisible -> <Anonymous> -> select_
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.1.1
Check: tests
Result: ERROR
     Running ‘testthat.R’
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(parsemsf)
     >
     > test_check("parsemsf")
     ── Warning (test_make_area_table.R:16:3): make_area_table creates a data frame w
     `select_()` is deprecated as of dplyr 0.7.0.
     Please use `select()` instead.
     This warning is displayed once every 8 hours.
     Call `lifecycle::last_warnings()` to see where this warning was generated.
    
     ── ERROR (test_make_area_table.R:16:3): make_area_table creates a data frame wit
     Error: no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
     Backtrace:
     █
     1. ├─testthat::expect_equal(...) test_make_area_table.R:16:2
     2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
     3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
     4. ├─base::colnames(make_area_table(parsemsf_example("test_db.msf")))
     5. │ └─base::is.data.frame(x)
     6. └─parsemsf::make_area_table(parsemsf_example("test_db.msf"))
     7. └─`%>%`(...)
     8. ├─base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
     9. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     10. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     11. └─parsemsf:::`_fseq`(`_lhs`)
     12. └─magrittr::freduce(value, `_function_list`)
     13. ├─base::withVisible(function_list[[k]](value))
     14. └─function_list[[k]](value)
     15. └─dplyr::select_(...)
    
     ── ERROR (test_make_pep_table.R:13:3): make_pep_table creates a data frame with
     Error: no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
     Backtrace:
     █
     1. ├─testthat::expect_equal(...) test_make_pep_table.R:13:2
     2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
     3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
     4. ├─base::colnames(make_pep_table(parsemsf_example("test_db.msf")))
     5. │ └─base::is.data.frame(x)
     6. └─parsemsf::make_pep_table(parsemsf_example("test_db.msf"))
     7. └─tbl(my_db, "SchemaInfo") %>% select_(~SoftwareVersion) %>% collect()
     8. ├─base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
     9. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     10. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     11. └─parsemsf:::`_fseq`(`_lhs`)
     12. └─magrittr::freduce(value, `_function_list`)
     13. └─function_list[[i]](value)
     14. └─dplyr::select_(., ~SoftwareVersion)
    
     ── ERROR (test_map_peptides.R:16:3): map_peptides creates a data frame with the
     Error: no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
     Backtrace:
     █
     1. ├─testthat::expect_equal(...) test_map_peptides.R:16:2
     2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
     3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
     4. ├─base::colnames(map_peptides(parsemsf_example("test_db.msf")))
     5. │ └─base::is.data.frame(x)
     6. └─parsemsf::map_peptides(parsemsf_example("test_db.msf"))
     7. ├─`%>%`(...)
     8. │ └─base::eval(lhs, parent, parent)
     9. │ └─base::eval(lhs, parent, parent)
     10. └─parsemsf::make_pep_table(msf_file, min_conf, collapse = FALSE)
     11. └─tbl(my_db, "SchemaInfo") %>% select_(~SoftwareVersion) %>% collect()
     12. ├─base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
     13. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     14. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     15. └─parsemsf:::`_fseq`(`_lhs`)
     16. └─magrittr::freduce(value, `_function_list`)
     17. └─function_list[[i]](value)
     18. └─dplyr::select_(., ~SoftwareVersion)
    
     ── ERROR (???): (code run outside of `test_that()`) ────────────────────────────
     Error: no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
     Backtrace:
     █
     1. └─parsemsf::make_area_table(parsemsf_example("test_db.msf"))
     2. └─`%>%`(...)
     3. ├─base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
     4. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     5. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     6. └─parsemsf:::`_fseq`(`_lhs`)
     7. └─magrittr::freduce(value, `_function_list`)
     8. ├─base::withVisible(function_list[[k]](value))
     9. └─function_list[[k]](value)
     10. └─dplyr::select_(...)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     Warning (test_make_area_table.R:16:3): make_area_table creates a data frame with the correct column names
     ERROR (test_make_area_table.R:16:3): make_area_table creates a data frame with the correct column names
     ERROR (test_make_pep_table.R:13:3): make_pep_table creates a data frame with the correct column names
     ERROR (test_map_peptides.R:16:3): map_peptides creates a data frame with the correct column names
     ERROR (???): (code run outside of `test_that()`)
    
     [ FAIL 4 | WARN 1 | SKIP 0 | PASS 0 ]
     Error: Test failures
     Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 0.1.1
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘introduction.Rmd’ using rmarkdown
    Quitting from lines 48-53 (introduction.Rmd)
    Error: processing vignette 'introduction.Rmd' failed with diagnostics:
    no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
    --- failed re-building ‘introduction.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘introduction.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.1.1
Check: tests
Result: ERROR
     Running 'testthat.R' [2s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(parsemsf)
     >
     > test_check("parsemsf")
     -- Warning (test_make_area_table.R:16:3): make_area_table creates a data frame w
     `select_()` is deprecated as of dplyr 0.7.0.
     Please use `select()` instead.
     This warning is displayed once every 8 hours.
     Call `lifecycle::last_warnings()` to see where this warning was generated.
    
     -- ERROR (test_make_area_table.R:16:3): make_area_table creates a data frame wit
     Error: no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
     Backtrace:
     x
     1. +-testthat::expect_equal(...) test_make_area_table.R:16:2
     2. | \-testthat::quasi_label(enquo(object), label, arg = "object")
     3. | \-rlang::eval_bare(expr, quo_get_env(quo))
     4. +-base::colnames(make_area_table(parsemsf_example("test_db.msf")))
     5. | \-base::is.data.frame(x)
     6. \-parsemsf::make_area_table(parsemsf_example("test_db.msf"))
     7. \-`%>%`(...)
     8. +-base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
     9. \-base::eval(quote(`_fseq`(`_lhs`)), env, env)
     10. \-base::eval(quote(`_fseq`(`_lhs`)), env, env)
     11. \-parsemsf:::`_fseq`(`_lhs`)
     12. \-magrittr::freduce(value, `_function_list`)
     13. +-base::withVisible(function_list[[k]](value))
     14. \-function_list[[k]](value)
     15. \-dplyr::select_(...)
    
     -- ERROR (test_make_pep_table.R:13:3): make_pep_table creates a data frame with
     Error: no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
     Backtrace:
     x
     1. +-testthat::expect_equal(...) test_make_pep_table.R:13:2
     2. | \-testthat::quasi_label(enquo(object), label, arg = "object")
     3. | \-rlang::eval_bare(expr, quo_get_env(quo))
     4. +-base::colnames(make_pep_table(parsemsf_example("test_db.msf")))
     5. | \-base::is.data.frame(x)
     6. \-parsemsf::make_pep_table(parsemsf_example("test_db.msf"))
     7. \-tbl(my_db, "SchemaInfo") %>% select_(~SoftwareVersion) %>% collect()
     8. +-base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
     9. \-base::eval(quote(`_fseq`(`_lhs`)), env, env)
     10. \-base::eval(quote(`_fseq`(`_lhs`)), env, env)
     11. \-parsemsf:::`_fseq`(`_lhs`)
     12. \-magrittr::freduce(value, `_function_list`)
     13. \-function_list[[i]](value)
     14. \-dplyr::select_(., ~SoftwareVersion)
    
     -- ERROR (test_map_peptides.R:16:3): map_peptides creates a data frame with the
     Error: no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
     Backtrace:
     x
     1. +-testthat::expect_equal(...) test_map_peptides.R:16:2
     2. | \-testthat::quasi_label(enquo(object), label, arg = "object")
     3. | \-rlang::eval_bare(expr, quo_get_env(quo))
     4. +-base::colnames(map_peptides(parsemsf_example("test_db.msf")))
     5. | \-base::is.data.frame(x)
     6. \-parsemsf::map_peptides(parsemsf_example("test_db.msf"))
     7. +-`%>%`(...)
     8. | \-base::eval(lhs, parent, parent)
     9. | \-base::eval(lhs, parent, parent)
     10. \-parsemsf::make_pep_table(msf_file, min_conf, collapse = FALSE)
     11. \-tbl(my_db, "SchemaInfo") %>% select_(~SoftwareVersion) %>% collect()
     12. +-base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
     13. \-base::eval(quote(`_fseq`(`_lhs`)), env, env)
     14. \-base::eval(quote(`_fseq`(`_lhs`)), env, env)
     15. \-parsemsf:::`_fseq`(`_lhs`)
     16. \-magrittr::freduce(value, `_function_list`)
     17. \-function_list[[i]](value)
     18. \-dplyr::select_(., ~SoftwareVersion)
    
     -- ERROR (???): (code run outside of `test_that()`) ----------------------------
     Error: no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
     Backtrace:
     x
     1. \-parsemsf::make_area_table(parsemsf_example("test_db.msf"))
     2. \-`%>%`(...)
     3. +-base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
     4. \-base::eval(quote(`_fseq`(`_lhs`)), env, env)
     5. \-base::eval(quote(`_fseq`(`_lhs`)), env, env)
     6. \-parsemsf:::`_fseq`(`_lhs`)
     7. \-magrittr::freduce(value, `_function_list`)
     8. +-base::withVisible(function_list[[k]](value))
     9. \-function_list[[k]](value)
     10. \-dplyr::select_(...)
    
     == testthat results ===========================================================
     Warning (test_make_area_table.R:16:3): make_area_table creates a data frame with the correct column names
     ERROR (test_make_area_table.R:16:3): make_area_table creates a data frame with the correct column names
     ERROR (test_make_pep_table.R:13:3): make_pep_table creates a data frame with the correct column names
     ERROR (test_map_peptides.R:16:3): map_peptides creates a data frame with the correct column names
     ERROR (???): (code run outside of `test_that()`)
    
     [ FAIL 4 | WARN 1 | SKIP 0 | PASS 0 ]
     Error: Test failures
     In addition: Warning message:
     call dbDisconnect() when finished working with a connection
     Execution halted
Flavors: r-devel-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.1.1
Check: tests
Result: ERROR
     Running ‘testthat.R’ [3s/3s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(parsemsf)
     >
     > test_check("parsemsf")
     ── Warning (test_make_area_table.R:16:3): make_area_table creates a data frame w
     `select_()` is deprecated as of dplyr 0.7.0.
     Please use `select()` instead.
     This warning is displayed once every 8 hours.
     Call `lifecycle::last_warnings()` to see where this warning was generated.
    
     ── ERROR (test_make_area_table.R:16:3): make_area_table creates a data frame wit
     Error: no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
     Backtrace:
     █
     1. ├─testthat::expect_equal(...) test_make_area_table.R:16:2
     2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
     3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
     4. ├─base::colnames(make_area_table(parsemsf_example("test_db.msf")))
     5. │ └─base::is.data.frame(x)
     6. └─parsemsf::make_area_table(parsemsf_example("test_db.msf"))
     7. └─`%>%`(...)
     8. ├─base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
     9. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     10. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     11. └─parsemsf:::`_fseq`(`_lhs`)
     12. └─magrittr::freduce(value, `_function_list`)
     13. ├─base::withVisible(function_list[[k]](value))
     14. └─function_list[[k]](value)
     15. └─dplyr::select_(...)
    
     ── ERROR (test_make_pep_table.R:13:3): make_pep_table creates a data frame with
     Error: no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
     Backtrace:
     █
     1. ├─testthat::expect_equal(...) test_make_pep_table.R:13:2
     2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
     3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
     4. ├─base::colnames(make_pep_table(parsemsf_example("test_db.msf")))
     5. │ └─base::is.data.frame(x)
     6. └─parsemsf::make_pep_table(parsemsf_example("test_db.msf"))
     7. └─tbl(my_db, "SchemaInfo") %>% select_(~SoftwareVersion) %>% collect()
     8. ├─base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
     9. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     10. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     11. └─parsemsf:::`_fseq`(`_lhs`)
     12. └─magrittr::freduce(value, `_function_list`)
     13. └─function_list[[i]](value)
     14. └─dplyr::select_(., ~SoftwareVersion)
    
     ── ERROR (test_map_peptides.R:16:3): map_peptides creates a data frame with the
     Error: no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
     Backtrace:
     █
     1. ├─testthat::expect_equal(...) test_map_peptides.R:16:2
     2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
     3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
     4. ├─base::colnames(map_peptides(parsemsf_example("test_db.msf")))
     5. │ └─base::is.data.frame(x)
     6. └─parsemsf::map_peptides(parsemsf_example("test_db.msf"))
     7. ├─`%>%`(...)
     8. │ └─base::eval(lhs, parent, parent)
     9. │ └─base::eval(lhs, parent, parent)
     10. └─parsemsf::make_pep_table(msf_file, min_conf, collapse = FALSE)
     11. └─tbl(my_db, "SchemaInfo") %>% select_(~SoftwareVersion) %>% collect()
     12. ├─base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
     13. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     14. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     15. └─parsemsf:::`_fseq`(`_lhs`)
     16. └─magrittr::freduce(value, `_function_list`)
     17. └─function_list[[i]](value)
     18. └─dplyr::select_(., ~SoftwareVersion)
    
     ── ERROR (???): (code run outside of `test_that()`) ────────────────────────────
     Error: no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
     Backtrace:
     █
     1. └─parsemsf::make_area_table(parsemsf_example("test_db.msf"))
     2. └─`%>%`(...)
     3. ├─base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
     4. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     5. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     6. └─parsemsf:::`_fseq`(`_lhs`)
     7. └─magrittr::freduce(value, `_function_list`)
     8. ├─base::withVisible(function_list[[k]](value))
     9. └─function_list[[k]](value)
     10. └─dplyr::select_(...)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     Warning (test_make_area_table.R:16:3): make_area_table creates a data frame with the correct column names
     ERROR (test_make_area_table.R:16:3): make_area_table creates a data frame with the correct column names
     ERROR (test_make_pep_table.R:13:3): make_pep_table creates a data frame with the correct column names
     ERROR (test_map_peptides.R:16:3): map_peptides creates a data frame with the correct column names
     ERROR (???): (code run outside of `test_that()`)
    
     [ FAIL 4 | WARN 1 | SKIP 0 | PASS 0 ]
     Error: Test failures
     In addition: Warning message:
     call dbDisconnect() when finished working with a connection
     Execution halted
Flavors: r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.1.1
Check: tests
Result: ERROR
     Running ‘testthat.R’
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(parsemsf)
     >
     > test_check("parsemsf")
     ── Warning (test_make_area_table.R:16:3): make_area_table creates a data frame w
     `select_()` is deprecated as of dplyr 0.7.0.
     Please use `select()` instead.
     This warning is displayed once every 8 hours.
     Call `lifecycle::last_warnings()` to see where this warning was generated.
    
     ── ERROR (test_make_area_table.R:16:3): make_area_table creates a data frame wit
     Error: no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
     Backtrace:
     █
     1. ├─testthat::expect_equal(...) test_make_area_table.R:16:2
     2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
     3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
     4. ├─base::colnames(make_area_table(parsemsf_example("test_db.msf")))
     5. │ └─base::is.data.frame(x)
     6. └─parsemsf::make_area_table(parsemsf_example("test_db.msf"))
     7. └─`%>%`(...)
     8. ├─base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
     9. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     10. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     11. └─parsemsf:::`_fseq`(`_lhs`)
     12. └─magrittr::freduce(value, `_function_list`)
     13. ├─base::withVisible(function_list[[k]](value))
     14. └─function_list[[k]](value)
     15. └─dplyr::select_(...)
    
     ── ERROR (test_make_pep_table.R:13:3): make_pep_table creates a data frame with
     Error: no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
     Backtrace:
     █
     1. ├─testthat::expect_equal(...) test_make_pep_table.R:13:2
     2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
     3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
     4. ├─base::colnames(make_pep_table(parsemsf_example("test_db.msf")))
     5. │ └─base::is.data.frame(x)
     6. └─parsemsf::make_pep_table(parsemsf_example("test_db.msf"))
     7. └─tbl(my_db, "SchemaInfo") %>% select_(~SoftwareVersion) %>% collect()
     8. ├─base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
     9. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     10. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     11. └─parsemsf:::`_fseq`(`_lhs`)
     12. └─magrittr::freduce(value, `_function_list`)
     13. └─function_list[[i]](value)
     14. └─dplyr::select_(., ~SoftwareVersion)
    
     ── ERROR (test_map_peptides.R:16:3): map_peptides creates a data frame with the
     Error: no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
     Backtrace:
     █
     1. ├─testthat::expect_equal(...) test_map_peptides.R:16:2
     2. │ └─testthat::quasi_label(enquo(object), label, arg = "object")
     3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
     4. ├─base::colnames(map_peptides(parsemsf_example("test_db.msf")))
     5. │ └─base::is.data.frame(x)
     6. └─parsemsf::map_peptides(parsemsf_example("test_db.msf"))
     7. ├─`%>%`(...)
     8. │ └─base::eval(lhs, parent, parent)
     9. │ └─base::eval(lhs, parent, parent)
     10. └─parsemsf::make_pep_table(msf_file, min_conf, collapse = FALSE)
     11. └─tbl(my_db, "SchemaInfo") %>% select_(~SoftwareVersion) %>% collect()
     12. ├─base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
     13. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     14. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     15. └─parsemsf:::`_fseq`(`_lhs`)
     16. └─magrittr::freduce(value, `_function_list`)
     17. └─function_list[[i]](value)
     18. └─dplyr::select_(., ~SoftwareVersion)
    
     ── ERROR (???): (code run outside of `test_that()`) ────────────────────────────
     Error: no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
     Backtrace:
     █
     1. └─parsemsf::make_area_table(parsemsf_example("test_db.msf"))
     2. └─`%>%`(...)
     3. ├─base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
     4. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     5. └─base::eval(quote(`_fseq`(`_lhs`)), env, env)
     6. └─parsemsf:::`_fseq`(`_lhs`)
     7. └─magrittr::freduce(value, `_function_list`)
     8. ├─base::withVisible(function_list[[k]](value))
     9. └─function_list[[k]](value)
     10. └─dplyr::select_(...)
    
     ══ testthat results ═══════════════════════════════════════════════════════════
     Warning (test_make_area_table.R:16:3): make_area_table creates a data frame with the correct column names
     ERROR (test_make_area_table.R:16:3): make_area_table creates a data frame with the correct column names
     ERROR (test_make_pep_table.R:13:3): make_pep_table creates a data frame with the correct column names
     ERROR (test_map_peptides.R:16:3): map_peptides creates a data frame with the correct column names
     ERROR (???): (code run outside of `test_that()`)
    
     [ FAIL 4 | WARN 1 | SKIP 0 | PASS 0 ]
     Error: Test failures
     Execution halted
     Warning message:
     call dbDisconnect() when finished working with a connection
Flavor: r-patched-solaris-x86

Version: 0.1.1
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘introduction.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Quitting from lines 48-53 (introduction.Rmd)
    Error: processing vignette 'introduction.Rmd' failed with diagnostics:
    no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
    --- failed re-building ‘introduction.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘introduction.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86

Version: 0.1.1
Check: tests
Result: ERROR
     Running 'testthat.R' [3s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(parsemsf)
     >
     > test_check("parsemsf")
     -- Warning (test_make_area_table.R:16:3): make_area_table creates a data frame w
     `select_()` is deprecated as of dplyr 0.7.0.
     Please use `select()` instead.
     This warning is displayed once every 8 hours.
     Call `lifecycle::last_warnings()` to see where this warning was generated.
    
     -- ERROR (test_make_area_table.R:16:3): make_area_table creates a data frame wit
     Error: no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
     Backtrace:
     x
     1. +-testthat::expect_equal(...) test_make_area_table.R:16:2
     2. | \-testthat::quasi_label(enquo(object), label, arg = "object")
     3. | \-rlang::eval_bare(expr, quo_get_env(quo))
     4. +-base::colnames(make_area_table(parsemsf_example("test_db.msf")))
     5. | \-base::is.data.frame(x)
     6. \-parsemsf::make_area_table(parsemsf_example("test_db.msf"))
     7. \-`%>%`(...)
     8. +-base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
     9. \-base::eval(quote(`_fseq`(`_lhs`)), env, env)
     10. \-base::eval(quote(`_fseq`(`_lhs`)), env, env)
     11. \-parsemsf:::`_fseq`(`_lhs`)
     12. \-magrittr::freduce(value, `_function_list`)
     13. +-base::withVisible(function_list[[k]](value))
     14. \-function_list[[k]](value)
     15. \-dplyr::select_(...)
    
     -- ERROR (test_make_pep_table.R:13:3): make_pep_table creates a data frame with
     Error: no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
     Backtrace:
     x
     1. +-testthat::expect_equal(...) test_make_pep_table.R:13:2
     2. | \-testthat::quasi_label(enquo(object), label, arg = "object")
     3. | \-rlang::eval_bare(expr, quo_get_env(quo))
     4. +-base::colnames(make_pep_table(parsemsf_example("test_db.msf")))
     5. | \-base::is.data.frame(x)
     6. \-parsemsf::make_pep_table(parsemsf_example("test_db.msf"))
     7. \-tbl(my_db, "SchemaInfo") %>% select_(~SoftwareVersion) %>% collect()
     8. +-base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
     9. \-base::eval(quote(`_fseq`(`_lhs`)), env, env)
     10. \-base::eval(quote(`_fseq`(`_lhs`)), env, env)
     11. \-parsemsf:::`_fseq`(`_lhs`)
     12. \-magrittr::freduce(value, `_function_list`)
     13. \-function_list[[i]](value)
     14. \-dplyr::select_(., ~SoftwareVersion)
    
     -- ERROR (test_map_peptides.R:16:3): map_peptides creates a data frame with the
     Error: no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
     Backtrace:
     x
     1. +-testthat::expect_equal(...) test_map_peptides.R:16:2
     2. | \-testthat::quasi_label(enquo(object), label, arg = "object")
     3. | \-rlang::eval_bare(expr, quo_get_env(quo))
     4. +-base::colnames(map_peptides(parsemsf_example("test_db.msf")))
     5. | \-base::is.data.frame(x)
     6. \-parsemsf::map_peptides(parsemsf_example("test_db.msf"))
     7. +-`%>%`(...)
     8. | \-base::eval(lhs, parent, parent)
     9. | \-base::eval(lhs, parent, parent)
     10. \-parsemsf::make_pep_table(msf_file, min_conf, collapse = FALSE)
     11. \-tbl(my_db, "SchemaInfo") %>% select_(~SoftwareVersion) %>% collect()
     12. +-base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
     13. \-base::eval(quote(`_fseq`(`_lhs`)), env, env)
     14. \-base::eval(quote(`_fseq`(`_lhs`)), env, env)
     15. \-parsemsf:::`_fseq`(`_lhs`)
     16. \-magrittr::freduce(value, `_function_list`)
     17. \-function_list[[i]](value)
     18. \-dplyr::select_(., ~SoftwareVersion)
    
     -- ERROR (???): (code run outside of `test_that()`) ----------------------------
     Error: no applicable method for 'select_' applied to an object of class "c('tbl_SQLiteConnection', 'tbl_dbi', 'tbl_sql', 'tbl_lazy', 'tbl')"
     Backtrace:
     x
     1. \-parsemsf::make_area_table(parsemsf_example("test_db.msf"))
     2. \-`%>%`(...)
     3. +-base::withVisible(eval(quote(`_fseq`(`_lhs`)), env, env))
     4. \-base::eval(quote(`_fseq`(`_lhs`)), env, env)
     5. \-base::eval(quote(`_fseq`(`_lhs`)), env, env)
     6. \-parsemsf:::`_fseq`(`_lhs`)
     7. \-magrittr::freduce(value, `_function_list`)
     8. +-base::withVisible(function_list[[k]](value))
     9. \-function_list[[k]](value)
     10. \-dplyr::select_(...)
    
     == testthat results ===========================================================
     Warning (test_make_area_table.R:16:3): make_area_table creates a data frame with the correct column names
     ERROR (test_make_area_table.R:16:3): make_area_table creates a data frame with the correct column names
     ERROR (test_make_pep_table.R:13:3): make_pep_table creates a data frame with the correct column names
     ERROR (test_map_peptides.R:16:3): map_peptides creates a data frame with the correct column names
     ERROR (???): (code run outside of `test_that()`)
    
     [ FAIL 4 | WARN 1 | SKIP 0 | PASS 0 ]
     Error: Test failures
     In addition: Warning message:
     call dbDisconnect() when finished working with a connection
     Execution halted
Flavor: r-release-windows-ix86+x86_64