Last updated on 2021-02-26 06:48:15 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.5.0 | 6.88 | 220.13 | 227.01 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.5.0 | 7.04 | 160.87 | 167.91 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.5.0 | 284.20 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.5.0 | 270.33 | OK | |||
| r-devel-windows-ix86+x86_64 | 0.5.0 | 15.00 | 203.00 | 218.00 | OK | |
| r-patched-linux-x86_64 | 0.5.0 | 8.40 | 212.50 | 220.90 | OK | |
| r-patched-solaris-x86 | 0.5.0 | 311.30 | ERROR | |||
| r-release-linux-x86_64 | 0.5.0 | 8.22 | 214.83 | 223.05 | OK | |
| r-release-macos-x86_64 | 0.5.0 | OK | ||||
| r-release-windows-ix86+x86_64 | 0.5.0 | 19.00 | 9.00 | 28.00 | ERROR | |
| r-oldrel-macos-x86_64 | 0.5.0 | OK | ||||
| r-oldrel-windows-ix86+x86_64 | 0.5.0 | 13.00 | 251.00 | 264.00 | OK |
Version: 0.5.0
Check: examples
Result: ERROR
Running examples in ‘pact-Ex.R’ failed
The error most likely occurred in:
> ### Name: print.eval.cv
> ### Title: Print an object of class 'eval.cv'
> ### Aliases: print.eval.cv
>
> ### ** Examples
>
> data(prostateCancer)
> Y <- prostateCancer[,3:4]
> Xf <- prostateCancer[,7:8]
> Xv <- prostateCancer[,c(5:6,9)]
> Treatment <- as.factor(prostateCancer[,2])
> p <- pact.fit(Y=Y, Xf=Xf, Xv=Xv, Treatment=Treatment, family="cox", varSelect="lasso")
Variable selection: lasso...
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
> cv <- pact.cv(p, nfold=5)
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
Warning: from glmnet Fortran code (error code -30000); Numerical error at 0th lambda value; solutions for larger values of lambda returned
Warning in getcoef(fit, nvars, nx, vnames) :
an empty model has been returned; probably a convergence issue
> eval <- eval.pact.cv(cv, method="discrete", g=log(0.80))
Error in survdiff.fit(y, groups, strata.keep, rho) :
There is only 1 group
Calls: eval.pact.cv ... .eval.pact.cv.survival.discrete -> survdiff -> survdiff.fit
Execution halted
Flavor: r-patched-solaris-x86
Version: 0.5.0
Check: whether package can be installed
Result: ERROR
Installation failed.
Flavor: r-release-windows-ix86+x86_64