CRAN Package Check Results for Package traitdataform

Last updated on 2021-04-30 08:48:33 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.6.5 8.29 73.78 82.07 ERROR
r-devel-linux-x86_64-debian-gcc 0.6.5 6.26 55.00 61.26 ERROR
r-devel-linux-x86_64-fedora-clang 0.6.5 112.10 ERROR
r-devel-linux-x86_64-fedora-gcc 0.6.5 94.69 ERROR
r-devel-windows-x86_64-gcc10-UCRT 0.6.5 ERROR
r-patched-linux-x86_64 0.6.5 8.93 69.77 78.70 ERROR
r-patched-solaris-x86 0.6.5 146.00 ERROR
r-release-linux-x86_64 0.6.5 8.25 69.01 77.26 ERROR
r-release-macos-x86_64 0.6.5 OK
r-release-windows-ix86+x86_64 0.6.5 13.00 86.00 99.00 ERROR
r-oldrel-macos-x86_64 0.6.5 OK
r-oldrel-windows-ix86+x86_64 0.6.5 16.00 105.00 121.00 ERROR

Additional issues

M1mac

Check Details

Version: 0.6.5
Check: LazyData
Result: NOTE
     'LazyData' is specified without a 'data' directory
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64-gcc10-UCRT, r-patched-linux-x86_64

Version: 0.6.5
Check: examples
Result: ERROR
    Running examples in 'traitdataform-Ex.R' failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: cast.traitdata
    > ### Title: Cast long-table trait data into wide-table format
    > ### Aliases: cast.traitdata
    >
    > ### ** Examples
    >
    >
    > pulldata("arthropodtraits")
    Direct call to data source failed. Please check internet connectivity and re-load data!
    > head(arthropodtraits)
    Error in head(arthropodtraits) : object 'arthropodtraits' not found
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.6.5
Check: tests
Result: ERROR
     Running 'testthat.R' [4s/31s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(traitdataform)
     >
     > test_check("traitdataform")
     â<c2><95><c2><90>â<c2><95><c2><90> Failed tests â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>â<c2><95><c2><90>
     â<c2><94><c2><80>â<c2><94><c2><80> Error (test.columns_to_ETS.R:6:1): (code run outside of `test_that()`) â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     â<c2><96><c2><88>
     1. â<c2><94><c2><9c>â<c2><94><c2><80>traitdataform::pulldata("carabids") test.columns_to_ETS.R:6:0
     2. â<c2><94><c2><82> â<c2><94><c2><9c>â<c2><94><c2><80>base::tryCatch(...)
     3. â<c2><94><c2><82> â<c2><94><c2><82> â<c2><94><c2><94>â<c2><94><c2><80>base:::tryCatchList(expr, classes, parentenv, handlers)
     4. â<c2><94><c2><82> â<c2><94><c2><82> â<c2><94><c2><94>â<c2><94><c2><80>base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. â<c2><94><c2><82> â<c2><94><c2><82> â<c2><94><c2><94>â<c2><94><c2><80>base:::doTryCatch(return(expr), name, parentenv, handler)
     6. â<c2><94><c2><82> â<c2><94><c2><9c>â<c2><94><c2><80>base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. â<c2><94><c2><82> â<c2><94><c2><94>â<c2><94><c2><80>base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. â<c2><94><c2><82> â<c2><94><c2><9c>â<c2><94><c2><80>base::withVisible(eval(ei, envir))
     9. â<c2><94><c2><82> â<c2><94><c2><94>â<c2><94><c2><80>base::eval(ei, envir)
     10. â<c2><94><c2><82> â<c2><94><c2><94>â<c2><94><c2><80>base::eval(ei, envir)
     11. â<c2><94><c2><94>â<c2><94><c2><80>utils::read.delim(...)
     12. â<c2><94><c2><94>â<c2><94><c2><80>utils::read.table(...)
     â<c2><94><c2><80>â<c2><94><c2><80> Error (test.map_gbif_taxonomy.R:6:1): (code run outside of `test_that()`) â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     â<c2><96><c2><88>
     1. â<c2><94><c2><9c>â<c2><94><c2><80>traitdataform::pulldata("carabids") test.map_gbif_taxonomy.R:6:0
     2. â<c2><94><c2><82> â<c2><94><c2><9c>â<c2><94><c2><80>base::tryCatch(...)
     3. â<c2><94><c2><82> â<c2><94><c2><82> â<c2><94><c2><94>â<c2><94><c2><80>base:::tryCatchList(expr, classes, parentenv, handlers)
     4. â<c2><94><c2><82> â<c2><94><c2><82> â<c2><94><c2><94>â<c2><94><c2><80>base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. â<c2><94><c2><82> â<c2><94><c2><82> â<c2><94><c2><94>â<c2><94><c2><80>base:::doTryCatch(return(expr), name, parentenv, handler)
     6. â<c2><94><c2><82> â<c2><94><c2><9c>â<c2><94><c2><80>base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. â<c2><94><c2><82> â<c2><94><c2><94>â<c2><94><c2><80>base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. â<c2><94><c2><82> â<c2><94><c2><9c>â<c2><94><c2><80>base::withVisible(eval(ei, envir))
     9. â<c2><94><c2><82> â<c2><94><c2><94>â<c2><94><c2><80>base::eval(ei, envir)
     10. â<c2><94><c2><82> â<c2><94><c2><94>â<c2><94><c2><80>base::eval(ei, envir)
     11. â<c2><94><c2><94>â<c2><94><c2><80>utils::read.delim(...)
     12. â<c2><94><c2><94>â<c2><94><c2><80>utils::read.table(...)
     â<c2><94><c2><80>â<c2><94><c2><80> Error (test.standardize.R:6:3): mapping of taxa works â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     â<c2><96><c2><88>
     1. â<c2><94><c2><9c>â<c2><94><c2><80>traitdataform::pulldata("carabids") test.standardize.R:6:2
     2. â<c2><94><c2><82> â<c2><94><c2><9c>â<c2><94><c2><80>base::tryCatch(...)
     3. â<c2><94><c2><82> â<c2><94><c2><82> â<c2><94><c2><94>â<c2><94><c2><80>base:::tryCatchList(expr, classes, parentenv, handlers)
     4. â<c2><94><c2><82> â<c2><94><c2><82> â<c2><94><c2><94>â<c2><94><c2><80>base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. â<c2><94><c2><82> â<c2><94><c2><82> â<c2><94><c2><94>â<c2><94><c2><80>base:::doTryCatch(return(expr), name, parentenv, handler)
     6. â<c2><94><c2><82> â<c2><94><c2><9c>â<c2><94><c2><80>base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. â<c2><94><c2><82> â<c2><94><c2><94>â<c2><94><c2><80>base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. â<c2><94><c2><82> â<c2><94><c2><9c>â<c2><94><c2><80>base::withVisible(eval(ei, envir))
     9. â<c2><94><c2><82> â<c2><94><c2><94>â<c2><94><c2><80>base::eval(ei, envir)
     10. â<c2><94><c2><82> â<c2><94><c2><94>â<c2><94><c2><80>base::eval(ei, envir)
     11. â<c2><94><c2><94>â<c2><94><c2><80>utils::read.delim(...)
     12. â<c2><94><c2><94>â<c2><94><c2><80>utils::read.table(...)
     â<c2><94><c2><80>â<c2><94><c2><80> Error (test.standardize.R:73:3): unit conversion works â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     â<c2><96><c2><88>
     1. â<c2><94><c2><9c>â<c2><94><c2><80>traitdataform::pulldata("carabids") test.standardize.R:73:2
     2. â<c2><94><c2><82> â<c2><94><c2><9c>â<c2><94><c2><80>base::tryCatch(...)
     3. â<c2><94><c2><82> â<c2><94><c2><82> â<c2><94><c2><94>â<c2><94><c2><80>base:::tryCatchList(expr, classes, parentenv, handlers)
     4. â<c2><94><c2><82> â<c2><94><c2><82> â<c2><94><c2><94>â<c2><94><c2><80>base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. â<c2><94><c2><82> â<c2><94><c2><82> â<c2><94><c2><94>â<c2><94><c2><80>base:::doTryCatch(return(expr), name, parentenv, handler)
     6. â<c2><94><c2><82> â<c2><94><c2><9c>â<c2><94><c2><80>base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. â<c2><94><c2><82> â<c2><94><c2><94>â<c2><94><c2><80>base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. â<c2><94><c2><82> â<c2><94><c2><9c>â<c2><94><c2><80>base::withVisible(eval(ei, envir))
     9. â<c2><94><c2><82> â<c2><94><c2><94>â<c2><94><c2><80>base::eval(ei, envir)
     10. â<c2><94><c2><82> â<c2><94><c2><94>â<c2><94><c2><80>base::eval(ei, envir)
     11. â<c2><94><c2><94>â<c2><94><c2><80>utils::read.delim(...)
     12. â<c2><94><c2><94>â<c2><94><c2><80>utils::read.table(...)
     â<c2><94><c2><80>â<c2><94><c2><80> Error (test.standardize.R:80:3): factor level harmonization works â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>â<c2><94><c2><80>
     Error: object 'arthropodtraits' not found
     Backtrace:
     â<c2><96><c2><88>
     1. â<c2><94><c2><94>â<c2><94><c2><80>traitdataform::as.traitdata(...) test.standardize.R:80:2
    
     [ FAIL 5 | WARN 0 | SKIP 0 | PASS 1 ]
     Error: Test failures
     Execution halted
Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.6.5
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building 'traitdataform.Rmd' using rmarkdown
    Quitting from lines 53-57 (traitdataform.Rmd)
    Error: processing vignette 'traitdataform.Rmd' failed with diagnostics:
    duplicate 'row.names' are not allowed
    --- failed re-building 'traitdataform.Rmd'
    
    SUMMARY: processing the following file failed:
     'traitdataform.Rmd'
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64-gcc10-UCRT, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.6.5
Check: tests
Result: ERROR
     Running ‘testthat.R’ [3s/19s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(traitdataform)
     >
     > test_check("traitdataform")
     ══ Failed tests ════════════════════════════════════════════════════════════════
     ── Error (test.columns_to_ETS.R:6:1): (code run outside of `test_that()`) ──────
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     █
     1. ├─traitdataform::pulldata("carabids") test.columns_to_ETS.R:6:0
     2. │ ├─base::tryCatch(...)
     3. │ │ └─base:::tryCatchList(expr, classes, parentenv, handlers)
     4. │ │ └─base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. │ │ └─base:::doTryCatch(return(expr), name, parentenv, handler)
     6. │ ├─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. │ └─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. │ ├─base::withVisible(eval(ei, envir))
     9. │ └─base::eval(ei, envir)
     10. │ └─base::eval(ei, envir)
     11. └─utils::read.delim(...)
     12. └─utils::read.table(...)
     ── Error (test.map_gbif_taxonomy.R:6:1): (code run outside of `test_that()`) ───
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     █
     1. ├─traitdataform::pulldata("carabids") test.map_gbif_taxonomy.R:6:0
     2. │ ├─base::tryCatch(...)
     3. │ │ └─base:::tryCatchList(expr, classes, parentenv, handlers)
     4. │ │ └─base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. │ │ └─base:::doTryCatch(return(expr), name, parentenv, handler)
     6. │ ├─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. │ └─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. │ ├─base::withVisible(eval(ei, envir))
     9. │ └─base::eval(ei, envir)
     10. │ └─base::eval(ei, envir)
     11. └─utils::read.delim(...)
     12. └─utils::read.table(...)
     ── Error (test.standardize.R:6:3): mapping of taxa works ───────────────────────
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     █
     1. ├─traitdataform::pulldata("carabids") test.standardize.R:6:2
     2. │ ├─base::tryCatch(...)
     3. │ │ └─base:::tryCatchList(expr, classes, parentenv, handlers)
     4. │ │ └─base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. │ │ └─base:::doTryCatch(return(expr), name, parentenv, handler)
     6. │ ├─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. │ └─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. │ ├─base::withVisible(eval(ei, envir))
     9. │ └─base::eval(ei, envir)
     10. │ └─base::eval(ei, envir)
     11. └─utils::read.delim(...)
     12. └─utils::read.table(...)
     ── Error (test.standardize.R:73:3): unit conversion works ──────────────────────
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     █
     1. ├─traitdataform::pulldata("carabids") test.standardize.R:73:2
     2. │ ├─base::tryCatch(...)
     3. │ │ └─base:::tryCatchList(expr, classes, parentenv, handlers)
     4. │ │ └─base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. │ │ └─base:::doTryCatch(return(expr), name, parentenv, handler)
     6. │ ├─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. │ └─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. │ ├─base::withVisible(eval(ei, envir))
     9. │ └─base::eval(ei, envir)
     10. │ └─base::eval(ei, envir)
     11. └─utils::read.delim(...)
     12. └─utils::read.table(...)
     ── Error (test.standardize.R:80:3): factor level harmonization works ───────────
     Error: object 'arthropodtraits' not found
     Backtrace:
     █
     1. └─traitdataform::as.traitdata(...) test.standardize.R:80:2
    
     [ FAIL 5 | WARN 0 | SKIP 0 | PASS 1 ]
     Error: Test failures
     Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.6.5
Check: examples
Result: ERROR
    Running examples in ‘traitdataform-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: cast.traitdata
    > ### Title: Cast long-table trait data into wide-table format
    > ### Aliases: cast.traitdata
    >
    > ### ** Examples
    >
    >
    > pulldata("arthropodtraits")
    Direct call to data source failed. Please check internet connectivity and re-load data!
    > head(arthropodtraits)
    Error in head(arthropodtraits) : object 'arthropodtraits' not found
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64-gcc10-UCRT, r-patched-solaris-x86, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.6.5
Check: tests
Result: ERROR
     Running ‘testthat.R’ [4s/19s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(traitdataform)
     >
     > test_check("traitdataform")
     ══ Failed tests ════════════════════════════════════════════════════════════════
     ── Error (test.columns_to_ETS.R:6:1): (code run outside of `test_that()`) ──────
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     █
     1. ├─traitdataform::pulldata("carabids") test.columns_to_ETS.R:6:0
     2. │ ├─base::tryCatch(...)
     3. │ │ └─base:::tryCatchList(expr, classes, parentenv, handlers)
     4. │ │ └─base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. │ │ └─base:::doTryCatch(return(expr), name, parentenv, handler)
     6. │ ├─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. │ └─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. │ ├─base::withVisible(eval(ei, envir))
     9. │ └─base::eval(ei, envir)
     10. │ └─base::eval(ei, envir)
     11. └─utils::read.delim(...)
     12. └─utils::read.table(...)
     ── Error (test.map_gbif_taxonomy.R:6:1): (code run outside of `test_that()`) ───
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     █
     1. ├─traitdataform::pulldata("carabids") test.map_gbif_taxonomy.R:6:0
     2. │ ├─base::tryCatch(...)
     3. │ │ └─base:::tryCatchList(expr, classes, parentenv, handlers)
     4. │ │ └─base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. │ │ └─base:::doTryCatch(return(expr), name, parentenv, handler)
     6. │ ├─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. │ └─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. │ ├─base::withVisible(eval(ei, envir))
     9. │ └─base::eval(ei, envir)
     10. │ └─base::eval(ei, envir)
     11. └─utils::read.delim(...)
     12. └─utils::read.table(...)
     ── Error (test.standardize.R:6:3): mapping of taxa works ───────────────────────
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     █
     1. ├─traitdataform::pulldata("carabids") test.standardize.R:6:2
     2. │ ├─base::tryCatch(...)
     3. │ │ └─base:::tryCatchList(expr, classes, parentenv, handlers)
     4. │ │ └─base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. │ │ └─base:::doTryCatch(return(expr), name, parentenv, handler)
     6. │ ├─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. │ └─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. │ ├─base::withVisible(eval(ei, envir))
     9. │ └─base::eval(ei, envir)
     10. │ └─base::eval(ei, envir)
     11. └─utils::read.delim(...)
     12. └─utils::read.table(...)
     ── Error (test.standardize.R:73:3): unit conversion works ──────────────────────
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     █
     1. ├─traitdataform::pulldata("carabids") test.standardize.R:73:2
     2. │ ├─base::tryCatch(...)
     3. │ │ └─base:::tryCatchList(expr, classes, parentenv, handlers)
     4. │ │ └─base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. │ │ └─base:::doTryCatch(return(expr), name, parentenv, handler)
     6. │ ├─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. │ └─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. │ ├─base::withVisible(eval(ei, envir))
     9. │ └─base::eval(ei, envir)
     10. │ └─base::eval(ei, envir)
     11. └─utils::read.delim(...)
     12. └─utils::read.table(...)
     ── Error (test.standardize.R:80:3): factor level harmonization works ───────────
     Error: object 'arthropodtraits' not found
     Backtrace:
     █
     1. └─traitdataform::as.traitdata(...) test.standardize.R:80:2
    
     [ FAIL 5 | WARN 0 | SKIP 0 | PASS 1 ]
     Error: Test failures
     Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-patched-linux-x86_64

Version: 0.6.5
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘traitdataform.Rmd’ using rmarkdown
    Quitting from lines 53-57 (traitdataform.Rmd)
    Error: processing vignette 'traitdataform.Rmd' failed with diagnostics:
    duplicate 'row.names' are not allowed
    --- failed re-building ‘traitdataform.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘traitdataform.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.6.5
Check: tests
Result: ERROR
     Running ‘testthat.R’ [3s/16s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(traitdataform)
     >
     > test_check("traitdataform")
     ══ Failed tests ════════════════════════════════════════════════════════════════
     ── Error (test.columns_to_ETS.R:6:1): (code run outside of `test_that()`) ──────
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     █
     1. ├─traitdataform::pulldata("carabids") test.columns_to_ETS.R:6:0
     2. │ ├─base::tryCatch(...)
     3. │ │ └─base:::tryCatchList(expr, classes, parentenv, handlers)
     4. │ │ └─base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. │ │ └─base:::doTryCatch(return(expr), name, parentenv, handler)
     6. │ ├─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. │ └─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. │ ├─base::withVisible(eval(ei, envir))
     9. │ └─base::eval(ei, envir)
     10. │ └─base::eval(ei, envir)
     11. └─utils::read.delim(...)
     12. └─utils::read.table(...)
     ── Error (test.map_gbif_taxonomy.R:6:1): (code run outside of `test_that()`) ───
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     █
     1. ├─traitdataform::pulldata("carabids") test.map_gbif_taxonomy.R:6:0
     2. │ ├─base::tryCatch(...)
     3. │ │ └─base:::tryCatchList(expr, classes, parentenv, handlers)
     4. │ │ └─base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. │ │ └─base:::doTryCatch(return(expr), name, parentenv, handler)
     6. │ ├─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. │ └─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. │ ├─base::withVisible(eval(ei, envir))
     9. │ └─base::eval(ei, envir)
     10. │ └─base::eval(ei, envir)
     11. └─utils::read.delim(...)
     12. └─utils::read.table(...)
     ── Error (test.standardize.R:6:3): mapping of taxa works ───────────────────────
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     █
     1. ├─traitdataform::pulldata("carabids") test.standardize.R:6:2
     2. │ ├─base::tryCatch(...)
     3. │ │ └─base:::tryCatchList(expr, classes, parentenv, handlers)
     4. │ │ └─base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. │ │ └─base:::doTryCatch(return(expr), name, parentenv, handler)
     6. │ ├─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. │ └─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. │ ├─base::withVisible(eval(ei, envir))
     9. │ └─base::eval(ei, envir)
     10. │ └─base::eval(ei, envir)
     11. └─utils::read.delim(...)
     12. └─utils::read.table(...)
     ── Error (test.standardize.R:73:3): unit conversion works ──────────────────────
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     █
     1. ├─traitdataform::pulldata("carabids") test.standardize.R:73:2
     2. │ ├─base::tryCatch(...)
     3. │ │ └─base:::tryCatchList(expr, classes, parentenv, handlers)
     4. │ │ └─base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. │ │ └─base:::doTryCatch(return(expr), name, parentenv, handler)
     6. │ ├─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. │ └─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. │ ├─base::withVisible(eval(ei, envir))
     9. │ └─base::eval(ei, envir)
     10. │ └─base::eval(ei, envir)
     11. └─utils::read.delim(...)
     12. └─utils::read.table(...)
     ── Error (test.standardize.R:80:3): factor level harmonization works ───────────
     Error: object 'arthropodtraits' not found
     Backtrace:
     █
     1. └─traitdataform::as.traitdata(...) test.standardize.R:80:2
    
     [ FAIL 5 | WARN 0 | SKIP 0 | PASS 1 ]
     Error: Test failures
     Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 0.6.5
Check: tests
Result: ERROR
     Running 'testthat.R'
    Running the tests in 'tests/testthat.R' failed.
    Last 13 lines of output:
     7. | \-base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. | +-base::withVisible(eval(ei, envir))
     9. | \-base::eval(ei, envir)
     10. | \-base::eval(ei, envir)
     11. \-utils::read.delim(...)
     12. \-utils::read.table(...)
     -- Error (test.standardize.R:80:3): factor level harmonization works -----------
     Error: object 'arthropodtraits' not found
     Backtrace:
     x
     1. \-traitdataform::as.traitdata(...) test.standardize.R:80:2
    
     [ FAIL 5 | WARN 0 | SKIP 0 | PASS 1 ]
     Error: Test failures
     Execution halted
Flavor: r-devel-windows-x86_64-gcc10-UCRT

Version: 0.6.5
Check: tests
Result: ERROR
     Running ‘testthat.R’ [5s/130s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(traitdataform)
     >
     > test_check("traitdataform")
     ══ Failed tests ════════════════════════════════════════════════════════════════
     ── Error (test.columns_to_ETS.R:6:1): (code run outside of `test_that()`) ──────
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     █
     1. ├─traitdataform::pulldata("carabids") test.columns_to_ETS.R:6:0
     2. │ ├─base::tryCatch(...)
     3. │ │ └─base:::tryCatchList(expr, classes, parentenv, handlers)
     4. │ │ └─base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. │ │ └─base:::doTryCatch(return(expr), name, parentenv, handler)
     6. │ ├─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. │ └─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. │ ├─base::withVisible(eval(ei, envir))
     9. │ └─base::eval(ei, envir)
     10. │ └─base::eval(ei, envir)
     11. └─utils::read.delim(...)
     12. └─utils::read.table(...)
     ── Error (test.map_gbif_taxonomy.R:6:1): (code run outside of `test_that()`) ───
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     █
     1. ├─traitdataform::pulldata("carabids") test.map_gbif_taxonomy.R:6:0
     2. │ ├─base::tryCatch(...)
     3. │ │ └─base:::tryCatchList(expr, classes, parentenv, handlers)
     4. │ │ └─base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. │ │ └─base:::doTryCatch(return(expr), name, parentenv, handler)
     6. │ ├─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. │ └─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. │ ├─base::withVisible(eval(ei, envir))
     9. │ └─base::eval(ei, envir)
     10. │ └─base::eval(ei, envir)
     11. └─utils::read.delim(...)
     12. └─utils::read.table(...)
     ── Error (test.standardize.R:6:3): mapping of taxa works ───────────────────────
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     █
     1. ├─traitdataform::pulldata("carabids") test.standardize.R:6:2
     2. │ ├─base::tryCatch(...)
     3. │ │ └─base:::tryCatchList(expr, classes, parentenv, handlers)
     4. │ │ └─base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. │ │ └─base:::doTryCatch(return(expr), name, parentenv, handler)
     6. │ ├─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. │ └─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. │ ├─base::withVisible(eval(ei, envir))
     9. │ └─base::eval(ei, envir)
     10. │ └─base::eval(ei, envir)
     11. └─utils::read.delim(...)
     12. └─utils::read.table(...)
     ── Error (test.standardize.R:73:3): unit conversion works ──────────────────────
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     █
     1. ├─traitdataform::pulldata("carabids") test.standardize.R:73:2
     2. │ ├─base::tryCatch(...)
     3. │ │ └─base:::tryCatchList(expr, classes, parentenv, handlers)
     4. │ │ └─base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. │ │ └─base:::doTryCatch(return(expr), name, parentenv, handler)
     6. │ ├─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. │ └─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. │ ├─base::withVisible(eval(ei, envir))
     9. │ └─base::eval(ei, envir)
     10. │ └─base::eval(ei, envir)
     11. └─utils::read.delim(...)
     12. └─utils::read.table(...)
     ── Error (test.standardize.R:80:3): factor level harmonization works ───────────
     Error: object 'arthropodtraits' not found
     Backtrace:
     █
     1. └─traitdataform::as.traitdata(...) test.standardize.R:80:2
    
     [ FAIL 5 | WARN 0 | SKIP 0 | PASS 1 ]
     Error: Test failures
     Execution halted
Flavor: r-patched-solaris-x86

Version: 0.6.5
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘traitdataform.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) not available. Falling back to R Markdown v1.
    Quitting from lines 53-57 (traitdataform.Rmd)
    Error: processing vignette 'traitdataform.Rmd' failed with diagnostics:
    duplicate 'row.names' are not allowed
    --- failed re-building ‘traitdataform.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘traitdataform.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86

Version: 0.6.5
Check: tests
Result: ERROR
     Running ‘testthat.R’ [4s/25s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(traitdataform)
     >
     > test_check("traitdataform")
     ══ Failed tests ════════════════════════════════════════════════════════════════
     ── Error (test.columns_to_ETS.R:6:1): (code run outside of `test_that()`) ──────
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     █
     1. ├─traitdataform::pulldata("carabids") test.columns_to_ETS.R:6:0
     2. │ ├─base::tryCatch(...)
     3. │ │ └─base:::tryCatchList(expr, classes, parentenv, handlers)
     4. │ │ └─base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. │ │ └─base:::doTryCatch(return(expr), name, parentenv, handler)
     6. │ ├─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. │ └─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. │ ├─base::withVisible(eval(ei, envir))
     9. │ └─base::eval(ei, envir)
     10. │ └─base::eval(ei, envir)
     11. └─utils::read.delim(...)
     12. └─utils::read.table(...)
     ── Error (test.map_gbif_taxonomy.R:6:1): (code run outside of `test_that()`) ───
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     █
     1. ├─traitdataform::pulldata("carabids") test.map_gbif_taxonomy.R:6:0
     2. │ ├─base::tryCatch(...)
     3. │ │ └─base:::tryCatchList(expr, classes, parentenv, handlers)
     4. │ │ └─base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. │ │ └─base:::doTryCatch(return(expr), name, parentenv, handler)
     6. │ ├─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. │ └─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. │ ├─base::withVisible(eval(ei, envir))
     9. │ └─base::eval(ei, envir)
     10. │ └─base::eval(ei, envir)
     11. └─utils::read.delim(...)
     12. └─utils::read.table(...)
     ── Error (test.standardize.R:6:3): mapping of taxa works ───────────────────────
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     █
     1. ├─traitdataform::pulldata("carabids") test.standardize.R:6:2
     2. │ ├─base::tryCatch(...)
     3. │ │ └─base:::tryCatchList(expr, classes, parentenv, handlers)
     4. │ │ └─base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. │ │ └─base:::doTryCatch(return(expr), name, parentenv, handler)
     6. │ ├─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. │ └─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. │ ├─base::withVisible(eval(ei, envir))
     9. │ └─base::eval(ei, envir)
     10. │ └─base::eval(ei, envir)
     11. └─utils::read.delim(...)
     12. └─utils::read.table(...)
     ── Error (test.standardize.R:73:3): unit conversion works ──────────────────────
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     █
     1. ├─traitdataform::pulldata("carabids") test.standardize.R:73:2
     2. │ ├─base::tryCatch(...)
     3. │ │ └─base:::tryCatchList(expr, classes, parentenv, handlers)
     4. │ │ └─base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. │ │ └─base:::doTryCatch(return(expr), name, parentenv, handler)
     6. │ ├─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. │ └─base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. │ ├─base::withVisible(eval(ei, envir))
     9. │ └─base::eval(ei, envir)
     10. │ └─base::eval(ei, envir)
     11. └─utils::read.delim(...)
     12. └─utils::read.table(...)
     ── Error (test.standardize.R:80:3): factor level harmonization works ───────────
     Error: object 'arthropodtraits' not found
     Backtrace:
     █
     1. └─traitdataform::as.traitdata(...) test.standardize.R:80:2
    
     [ FAIL 5 | WARN 0 | SKIP 0 | PASS 1 ]
     Error: Test failures
     Execution halted
Flavor: r-release-linux-x86_64

Version: 0.6.5
Check: tests
Result: ERROR
     Running 'testthat.R' [12s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(traitdataform)
     >
     > test_check("traitdataform")
     == Failed tests ================================================================
     -- Error (test.columns_to_ETS.R:6:1): (code run outside of `test_that()`) ------
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     x
     1. +-traitdataform::pulldata("carabids") test.columns_to_ETS.R:6:0
     2. | +-base::tryCatch(...)
     3. | | \-base:::tryCatchList(expr, classes, parentenv, handlers)
     4. | | \-base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. | | \-base:::doTryCatch(return(expr), name, parentenv, handler)
     6. | +-base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. | \-base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. | +-base::withVisible(eval(ei, envir))
     9. | \-base::eval(ei, envir)
     10. | \-base::eval(ei, envir)
     11. \-utils::read.delim(...)
     12. \-utils::read.table(...)
     -- Error (test.map_gbif_taxonomy.R:6:1): (code run outside of `test_that()`) ---
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     x
     1. +-traitdataform::pulldata("carabids") test.map_gbif_taxonomy.R:6:0
     2. | +-base::tryCatch(...)
     3. | | \-base:::tryCatchList(expr, classes, parentenv, handlers)
     4. | | \-base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. | | \-base:::doTryCatch(return(expr), name, parentenv, handler)
     6. | +-base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. | \-base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. | +-base::withVisible(eval(ei, envir))
     9. | \-base::eval(ei, envir)
     10. | \-base::eval(ei, envir)
     11. \-utils::read.delim(...)
     12. \-utils::read.table(...)
     -- Error (test.standardize.R:6:3): mapping of taxa works -----------------------
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     x
     1. +-traitdataform::pulldata("carabids") test.standardize.R:6:2
     2. | +-base::tryCatch(...)
     3. | | \-base:::tryCatchList(expr, classes, parentenv, handlers)
     4. | | \-base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. | | \-base:::doTryCatch(return(expr), name, parentenv, handler)
     6. | +-base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. | \-base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. | +-base::withVisible(eval(ei, envir))
     9. | \-base::eval(ei, envir)
     10. | \-base::eval(ei, envir)
     11. \-utils::read.delim(...)
     12. \-utils::read.table(...)
     -- Error (test.standardize.R:73:3): unit conversion works ----------------------
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     x
     1. +-traitdataform::pulldata("carabids") test.standardize.R:73:2
     2. | +-base::tryCatch(...)
     3. | | \-base:::tryCatchList(expr, classes, parentenv, handlers)
     4. | | \-base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. | | \-base:::doTryCatch(return(expr), name, parentenv, handler)
     6. | +-base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. | \-base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. | +-base::withVisible(eval(ei, envir))
     9. | \-base::eval(ei, envir)
     10. | \-base::eval(ei, envir)
     11. \-utils::read.delim(...)
     12. \-utils::read.table(...)
     -- Error (test.standardize.R:80:3): factor level harmonization works -----------
     Error: object 'arthropodtraits' not found
     Backtrace:
     x
     1. \-traitdataform::as.traitdata(...) test.standardize.R:80:2
    
     [ FAIL 5 | WARN 0 | SKIP 0 | PASS 1 ]
     Error: Test failures
     Execution halted
Flavor: r-release-windows-ix86+x86_64

Version: 0.6.5
Check: tests
Result: ERROR
     Running 'testthat.R' [14s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(traitdataform)
     >
     > test_check("traitdataform")
     == Failed tests ================================================================
     -- Error (test.columns_to_ETS.R:6:1): (code run outside of `test_that()`) ------
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     x
     1. +-traitdataform::pulldata("carabids") test.columns_to_ETS.R:6:0
     2. | +-base::tryCatch(...)
     3. | | \-base:::tryCatchList(expr, classes, parentenv, handlers)
     4. | | \-base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. | | \-base:::doTryCatch(return(expr), name, parentenv, handler)
     6. | +-base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. | \-base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. | +-base::withVisible(eval(ei, envir))
     9. | \-base::eval(ei, envir)
     10. | \-base::eval(ei, envir)
     11. \-utils::read.delim(...)
     12. \-utils::read.table(...)
     -- Error (test.map_gbif_taxonomy.R:6:1): (code run outside of `test_that()`) ---
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     x
     1. +-traitdataform::pulldata("carabids") test.map_gbif_taxonomy.R:6:0
     2. | +-base::tryCatch(...)
     3. | | \-base:::tryCatchList(expr, classes, parentenv, handlers)
     4. | | \-base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. | | \-base:::doTryCatch(return(expr), name, parentenv, handler)
     6. | +-base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. | \-base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. | +-base::withVisible(eval(ei, envir))
     9. | \-base::eval(ei, envir)
     10. | \-base::eval(ei, envir)
     11. \-utils::read.delim(...)
     12. \-utils::read.table(...)
     -- Error (test.standardize.R:6:3): mapping of taxa works -----------------------
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     x
     1. +-traitdataform::pulldata("carabids") test.standardize.R:6:2
     2. | +-base::tryCatch(...)
     3. | | \-base:::tryCatchList(expr, classes, parentenv, handlers)
     4. | | \-base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. | | \-base:::doTryCatch(return(expr), name, parentenv, handler)
     6. | +-base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. | \-base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. | +-base::withVisible(eval(ei, envir))
     9. | \-base::eval(ei, envir)
     10. | \-base::eval(ei, envir)
     11. \-utils::read.delim(...)
     12. \-utils::read.table(...)
     -- Error (test.standardize.R:73:3): unit conversion works ----------------------
     Error: duplicate 'row.names' are not allowed
     Backtrace:
     x
     1. +-traitdataform::pulldata("carabids") test.standardize.R:73:2
     2. | +-base::tryCatch(...)
     3. | | \-base:::tryCatchList(expr, classes, parentenv, handlers)
     4. | | \-base:::tryCatchOne(expr, names, parentenv, handlers[[1L]])
     5. | | \-base:::doTryCatch(return(expr), name, parentenv, handler)
     6. | +-base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     7. | \-base::source(system.file("extdata", paste0(x, ".R"), package = "traitdataform"))
     8. | +-base::withVisible(eval(ei, envir))
     9. | \-base::eval(ei, envir)
     10. | \-base::eval(ei, envir)
     11. \-utils::read.delim(...)
     12. \-utils::read.table(...)
     -- Error (test.standardize.R:80:3): factor level harmonization works -----------
     Error: object 'arthropodtraits' not found
     Backtrace:
     x
     1. \-traitdataform::as.traitdata(...) test.standardize.R:80:2
    
     [ FAIL 5 | WARN 0 | SKIP 0 | PASS 1 ]
     Error: Test failures
     Execution halted
Flavor: r-oldrel-windows-ix86+x86_64