CRAN Package Check Results for Package rhmmer

Last updated on 2021-08-04 06:48:49 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.1.0 2.12 30.22 32.34 ERROR
r-devel-linux-x86_64-debian-gcc 0.1.0 1.48 23.28 24.76 ERROR
r-devel-linux-x86_64-fedora-clang 0.1.0 47.73 ERROR
r-devel-linux-x86_64-fedora-gcc 0.1.0 37.06 ERROR
r-devel-windows-x86_64 0.1.0 4.00 46.00 50.00 ERROR
r-devel-windows-x86_64-gcc10-UCRT 0.1.0 ERROR
r-patched-linux-x86_64 0.1.0 2.06 28.32 30.38 ERROR
r-patched-solaris-x86 0.1.0 52.70 ERROR
r-release-linux-x86_64 0.1.0 2.05 28.49 30.54 ERROR
r-release-macos-arm64 0.1.0 ERROR
r-release-macos-x86_64 0.1.0 NOTE
r-release-windows-ix86+x86_64 0.1.0 6.00 49.00 55.00 ERROR
r-oldrel-macos-x86_64 0.1.0 NOTE
r-oldrel-windows-ix86+x86_64 0.1.0 7.00 49.00 56.00 ERROR

Check Details

Version: 0.1.0
Check: LazyData
Result: NOTE
     'LazyData' is specified without a 'data' directory
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-devel-windows-x86_64-gcc10-UCRT, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-ix86+x86_64

Version: 0.1.0
Check: tests
Result: ERROR
     Running 'testthat.R' [4s/5s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(rhmmer)
     >
     > test_check("rhmmer")
     == Failed tests ================================================================
     -- Failure (test-parse.R:11:3): read_tblout works ------------------------------
     `read_tblout(tblout_file)` produced messages.
     -- Failure (test-parse.R:17:3): read_domtblout works ---------------------------
     `read_domtblout(domtblout_file)` produced messages.
     -- Failure (test-parse.R:27:3): files with no data do not fail -----------------
     `read_domtblout(empty_tblout_file)` produced messages.
     -- Failure (test-parse.R:28:3): files with no data do not fail -----------------
     `read_tblout(empty_domtblout_file)` produced messages.
    
     [ FAIL 4 | WARN 0 | SKIP 0 | PASS 6 ]
     Error: Test failures
     Execution halted
Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.1.0
Check: tests
Result: ERROR
     Running ‘testthat.R’ [3s/4s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(rhmmer)
     >
     > test_check("rhmmer")
     ══ Failed tests ════════════════════════════════════════════════════════════════
     ── Failure (test-parse.R:11:3): read_tblout works ──────────────────────────────
     `read_tblout(tblout_file)` produced messages.
     ── Failure (test-parse.R:17:3): read_domtblout works ───────────────────────────
     `read_domtblout(domtblout_file)` produced messages.
     ── Failure (test-parse.R:27:3): files with no data do not fail ─────────────────
     `read_domtblout(empty_tblout_file)` produced messages.
     ── Failure (test-parse.R:28:3): files with no data do not fail ─────────────────
     `read_tblout(empty_domtblout_file)` produced messages.
    
     [ FAIL 4 | WARN 0 | SKIP 0 | PASS 6 ]
     Error: Test failures
     Execution halted
Flavors: r-devel-linux-x86_64-debian-gcc, r-release-linux-x86_64

Version: 0.1.0
Check: dependencies in R code
Result: NOTE
    Namespace in Imports field not imported from: ‘dplyr’
     All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64-gcc10-UCRT, r-patched-solaris-x86, r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-x86_64

Version: 0.1.0
Check: tests
Result: ERROR
     Running ‘testthat.R’
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(rhmmer)
     >
     > test_check("rhmmer")
     ══ Failed tests ════════════════════════════════════════════════════════════════
     ── Failure (test-parse.R:11:3): read_tblout works ──────────────────────────────
     `read_tblout(tblout_file)` produced messages.
     ── Failure (test-parse.R:17:3): read_domtblout works ───────────────────────────
     `read_domtblout(domtblout_file)` produced messages.
     ── Failure (test-parse.R:27:3): files with no data do not fail ─────────────────
     `read_domtblout(empty_tblout_file)` produced messages.
     ── Failure (test-parse.R:28:3): files with no data do not fail ─────────────────
     `read_tblout(empty_domtblout_file)` produced messages.
    
     [ FAIL 4 | WARN 0 | SKIP 0 | PASS 6 ]
     Error: Test failures
     Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64-gcc10-UCRT, r-patched-solaris-x86

Version: 0.1.0
Check: tests
Result: ERROR
     Running 'testthat.R' [5s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(rhmmer)
     >
     > test_check("rhmmer")
     == Failed tests ================================================================
     -- Failure (test-parse.R:11:3): read_tblout works ------------------------------
     `read_tblout(tblout_file)` produced messages.
     -- Failure (test-parse.R:17:3): read_domtblout works ---------------------------
     `read_domtblout(domtblout_file)` produced messages.
     -- Failure (test-parse.R:27:3): files with no data do not fail -----------------
     `read_domtblout(empty_tblout_file)` produced messages.
     -- Failure (test-parse.R:28:3): files with no data do not fail -----------------
     `read_tblout(empty_domtblout_file)` produced messages.
    
     [ FAIL 4 | WARN 0 | SKIP 0 | PASS 6 ]
     Error: Test failures
     Execution halted
Flavors: r-devel-windows-x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.1.0
Check: tests
Result: ERROR
     Running ‘testthat.R’ [4s/4s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > library(testthat)
     > library(rhmmer)
     >
     > test_check("rhmmer")
     ══ Failed tests ════════════════════════════════════════════════════════════════
     ── Failure (test-parse.R:11:3): read_tblout works ──────────────────────────────
     `read_tblout(tblout_file)` produced messages.
     ── Failure (test-parse.R:17:3): read_domtblout works ───────────────────────────
     `read_domtblout(domtblout_file)` produced messages.
     ── Failure (test-parse.R:27:3): files with no data do not fail ─────────────────
     `read_domtblout(empty_tblout_file)` produced messages.
     ── Failure (test-parse.R:28:3): files with no data do not fail ─────────────────
     `read_tblout(empty_domtblout_file)` produced messages.
    
     [ FAIL 4 | WARN 0 | SKIP 0 | PASS 6 ]
     Error: Test failures
     Execution halted
Flavor: r-patched-linux-x86_64

Version: 0.1.0
Check: tests
Result: ERROR
     Running ‘testthat.R’ [1s/2s]
    Running the tests in ‘tests/testthat.R’ failed.
    Last 13 lines of output:
     >
     > test_check("rhmmer")
     ══ Failed tests ════════════════════════════════════════════════════════════════
     ── Failure (test-parse.R:11:3): read_tblout works ──────────────────────────────
     `read_tblout(tblout_file)` produced messages.
     ── Failure (test-parse.R:17:3): read_domtblout works ───────────────────────────
     `read_domtblout(domtblout_file)` produced messages.
     ── Failure (test-parse.R:27:3): files with no data do not fail ─────────────────
     `read_domtblout(empty_tblout_file)` produced messages.
     ── Failure (test-parse.R:28:3): files with no data do not fail ─────────────────
     `read_tblout(empty_domtblout_file)` produced messages.
    
     [ FAIL 4 | WARN 0 | SKIP 0 | PASS 6 ]
     Error: Test failures
     Execution halted
Flavor: r-release-macos-arm64

Version: 0.1.0
Check: tests
Result: ERROR
     Running 'testthat.R' [4s]
    Running the tests in 'tests/testthat.R' failed.
    Complete output:
     > library(testthat)
     > library(rhmmer)
     >
     > test_check("rhmmer")
     == Failed tests ================================================================
     -- Failure (test-parse.R:11:3): read_tblout works ------------------------------
     `read_tblout(tblout_file)` produced messages.
     -- Failure (test-parse.R:17:3): read_domtblout works ---------------------------
     `read_domtblout(domtblout_file)` produced messages.
     -- Failure (test-parse.R:27:3): files with no data do not fail -----------------
     `read_domtblout(empty_tblout_file)` produced messages.
     -- Failure (test-parse.R:28:3): files with no data do not fail -----------------
     `read_tblout(empty_domtblout_file)` produced messages.
    
     [ FAIL 4 | WARN 0 | SKIP 0 | PASS 6 ]
     Error: Test failures
     Execution halted
Flavor: r-release-windows-ix86+x86_64