Last updated on 2021-10-06 10:52:36 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.0 | 40.56 | 390.25 | 430.81 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 0.1.0 | 36.91 | 292.05 | 328.96 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 0.1.0 | 558.44 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 0.1.0 | 528.22 | NOTE | |||
| r-devel-windows-x86_64 | 0.1.0 | 62.00 | 320.00 | 382.00 | ERROR | |
| r-devel-windows-x86_64-gcc10-UCRT | 0.1.0 | ERROR | ||||
| r-patched-linux-x86_64 | 0.1.0 | 41.23 | 366.66 | 407.89 | NOTE | |
| r-patched-solaris-x86 | 0.1.0 | 656.90 | NOTE | |||
| r-release-linux-x86_64 | 0.1.0 | 39.79 | 371.03 | 410.82 | NOTE | |
| r-release-macos-arm64 | 0.1.0 | NOTE | ||||
| r-release-macos-x86_64 | 0.1.0 | ERROR | ||||
| r-release-windows-ix86+x86_64 | 0.1.0 | 98.00 | 467.00 | 565.00 | NOTE | |
| r-oldrel-macos-x86_64 | 0.1.0 | ERROR | ||||
| r-oldrel-windows-ix86+x86_64 | 0.1.0 | 75.00 | 374.00 | 449.00 | OK |
Version: 0.1.0
Check: LazyData
Result: NOTE
'LazyData' is specified without a 'data' directory
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-devel-windows-x86_64-gcc10-UCRT, r-patched-linux-x86_64, r-patched-solaris-x86, r-release-linux-x86_64, r-release-macos-arm64, r-release-windows-ix86+x86_64
Version: 0.1.0
Check: examples
Result: ERROR
Running examples in 'MAFDash-Ex.R' failed
The error most likely occurred in:
> ### Name: compute_exome_coverage
> ### Title: Compute exome coverage from a region file
> ### Aliases: compute_exome_coverage
>
> ### ** Examples
>
> library(MAFDash)
> bedFile <- system.file("extdata", "test.bed", package = "MAFDash")
> coverage<-compute_exome_coverage(bedFile)
Error in ..Internal(is.unsorted(x, FALSE)) :
2 arguments passed to .Internal(is.unsorted) which requires 3
Calls: compute_exome_coverage ... <Anonymous> -> .splitAsList_by_integer_Rle -> <Anonymous>
Execution halted
Flavors: r-devel-windows-x86_64, r-devel-windows-x86_64-gcc10-UCRT
Version: 0.1.0
Check: package dependencies
Result: ERROR
Packages required but not available: 'TCGAbiolinks', 'maftools'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64