Last updated on 2021-10-08 16:49:50 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.0.0 | 4.39 | 67.38 | 71.77 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.0.0 | 3.66 | 50.27 | 53.93 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.0.0 | 124.78 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 1.0.0 | 116.88 | OK | |||
| r-devel-windows-x86_64 | 1.0.0 | 9.00 | 92.00 | 101.00 | OK | |
| r-devel-windows-x86_64-gcc10-UCRT | 1.0.0 | OK | ||||
| r-patched-linux-x86_64 | 1.0.0 | 5.19 | 65.16 | 70.35 | ERROR | |
| r-patched-solaris-x86 | 1.0.0 | 107.10 | ERROR | |||
| r-release-linux-x86_64 | 1.0.0 | 4.05 | 66.95 | 71.00 | ERROR | |
| r-release-macos-arm64 | 1.0.0 | OK | ||||
| r-release-macos-x86_64 | 1.0.0 | OK | ||||
| r-release-windows-ix86+x86_64 | 1.0.0 | 10.00 | 121.00 | 131.00 | OK | |
| r-oldrel-macos-x86_64 | 1.0.0 | ERROR | ||||
| r-oldrel-windows-ix86+x86_64 | 1.0.0 | 11.00 | 8.00 | 19.00 | ERROR |
Version: 1.0.0
Check: examples
Result: ERROR
Running examples in 'rassta-Ex.R' failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: engine
> ### Title: Spatial Modeling Engine
> ### Aliases: engine
>
> ### ** Examples
>
> require(terra)
Loading required package: terra
terra version 1.4.7
> p <- system.file("exdat", package = "rassta")
> # Multi-layer SpatRaster of landscape similarities
> fls <- list.files(path = p, pattern = "su_", full.names = TRUE)
> ls <- terra::rast(fls)
> # Numeric code and representative response value for stratification units
> fro <-list.files(path = p, pattern = "repobs.csv", full.names = TRUE)
> ro <- read.csv(fro)
> # Extract only those stratification units with representative value
> ls <- ls[[as.character(ro$SU)]]
> # SpatVector with processing tiles
> fti <- list.files(path = p, pattern = "tiles.shp", full.names = TRUE)
> ti <- terra::vect(fti)
> # Perform spatial modeling of continuous response
> r <- engine(res.type = "cont", ls.rast = ls, n.win = 2, su.repobs = ro,
+ tiles = ti, outdir = p, overwrite = TRUE
+ )
Warning: Attempt to create new tiff file `/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rassta/exdat/soc_tile1.tif' failed: Read-only file system (GDAL error 4)
Warning: Attempt to create new tiff file `/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rassta/exdat/soc_tile2.tif' failed: Read-only file system (GDAL error 4)
Warning: Attempt to create new tiff file `/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rassta/exdat/soc_tile3.tif' failed: Read-only file system (GDAL error 4)
Warning: Attempt to create new tiff file `/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/rassta/exdat/soc_tile4.tif' failed: Read-only file system (GDAL error 4)
Error in { :
task 1 failed - "task 1 failed - "[writeRaster] failed writing GTiff file""
Calls: engine -> %ps% -> <Anonymous>
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.0.0
Check: examples
Result: ERROR
Running examples in ‘rassta-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: engine
> ### Title: Spatial Modeling Engine
> ### Aliases: engine
>
> ### ** Examples
>
> require(terra)
Loading required package: terra
terra version 1.4.9
> p <- system.file("exdat", package = "rassta")
> # Multi-layer SpatRaster of landscape similarities
> fls <- list.files(path = p, pattern = "su_", full.names = TRUE)
> ls <- terra::rast(fls)
> # Numeric code and representative response value for stratification units
> fro <-list.files(path = p, pattern = "repobs.csv", full.names = TRUE)
> ro <- read.csv(fro)
> # Extract only those stratification units with representative value
> ls <- ls[[as.character(ro$SU)]]
> # SpatVector with processing tiles
> fti <- list.files(path = p, pattern = "tiles.shp", full.names = TRUE)
> ti <- terra::vect(fti)
> # Perform spatial modeling of continuous response
> r <- engine(res.type = "cont", ls.rast = ls, n.win = 2, su.repobs = ro,
+ tiles = ti, outdir = p, overwrite = TRUE
+ )
Warning: Attempt to create new tiff file `/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/rassta/exdat/soc_tile1.tif' failed: Read-only file system (GDAL error 4)
Warning: Attempt to create new tiff file `/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/rassta/exdat/soc_tile2.tif' failed: Read-only file system (GDAL error 4)
Warning: Attempt to create new tiff file `/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/rassta/exdat/soc_tile3.tif' failed: Read-only file system (GDAL error 4)
Warning: Attempt to create new tiff file `/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/rassta/exdat/soc_tile4.tif' failed: Read-only file system (GDAL error 4)
Error in { :
task 1 failed - "task 1 failed - "[writeRaster] failed writing GTiff file""
Calls: engine -> %ps% -> <Anonymous>
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.0.0
Check: Rd cross-references
Result: NOTE
Undeclared package ‘htmlwidgets’ in Rd xrefs
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.0.0
Check: examples
Result: ERROR
Running examples in ‘rassta-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: engine
> ### Title: Spatial Modeling Engine
> ### Aliases: engine
>
> ### ** Examples
>
> require(terra)
Loading required package: terra
terra version 1.4.7
> p <- system.file("exdat", package = "rassta")
> # Multi-layer SpatRaster of landscape similarities
> fls <- list.files(path = p, pattern = "su_", full.names = TRUE)
> ls <- terra::rast(fls)
> # Numeric code and representative response value for stratification units
> fro <-list.files(path = p, pattern = "repobs.csv", full.names = TRUE)
> ro <- read.csv(fro)
> # Extract only those stratification units with representative value
> ls <- ls[[as.character(ro$SU)]]
> # SpatVector with processing tiles
> fti <- list.files(path = p, pattern = "tiles.shp", full.names = TRUE)
> ti <- terra::vect(fti)
> # Perform spatial modeling of continuous response
> r <- engine(res.type = "cont", ls.rast = ls, n.win = 2, su.repobs = ro,
+ tiles = ti, outdir = p, overwrite = TRUE
+ )
Warning: Attempt to create new tiff file `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rassta/exdat/soc_tile1.tif' failed: Read-only file system (GDAL error 4)
Warning: Attempt to create new tiff file `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rassta/exdat/soc_tile2.tif' failed: Read-only file system (GDAL error 4)
Warning: Attempt to create new tiff file `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rassta/exdat/soc_tile3.tif' failed: Read-only file system (GDAL error 4)
Warning: Attempt to create new tiff file `/home/hornik/tmp/R.check/r-patched-gcc/Work/build/Packages/rassta/exdat/soc_tile4.tif' failed: Read-only file system (GDAL error 4)
Error in { :
task 1 failed - "task 1 failed - "[writeRaster] failed writing GTiff file""
Calls: engine -> %ps% -> <Anonymous>
Execution halted
Flavor: r-patched-linux-x86_64
Version: 1.0.0
Check: examples
Result: ERROR
Running examples in ‘rassta-Ex.R’ failed
The error most likely occurred in:
> ### Name: locations
> ### Title: Select Representative Sampling Locations for Stratification
> ### Units
> ### Aliases: locations
>
> ### ** Examples
>
> require(terra)
Loading required package: terra
terra version 1.4.9
> p <- system.file("exdat", package = "rassta")
> # Multi-layer SpatRaster of landscape similarities
> fls <- list.files(path = p, pattern = "su_", full.names = TRUE)
> ls <- terra::rast(fls)
> # Single-layer SpatRaster of stratification units
> fsu <- list.files(path = p, pattern = "strata.tif", full.names = TRUE)
> su <- terra::rast(fsu)
> # Get 1 representative sampling location per stratification unit
> rl <- locations(ls.rast = ls, su.rast = su)
Error in { : task 1 failed - "[expanse] input crs is not valid"
Calls: locations -> %ps% -> <Anonymous>
Execution halted
Flavor: r-patched-solaris-x86
Version: 1.0.0
Check: tests
Result: ERROR
Running ‘tinytest.R’ [14s/19s]
Running the tests in ‘tests/tinytest.R’ failed.
Complete output:
>
> if ( requireNamespace("tinytest", quietly=TRUE) ){
+ tinytest::test_package("rassta")
+ }
Attaching package: 'rassta'
The following object is masked from 'package:methods':
signature
test_dummies.R................ 0 tests
test_dummies.R................ 0 tests
test_dummies.R................ 0 tests
test_dummies.R................ 0 tests
test_dummies.R................ 1 tests <1b>[0;32mOK<1b>[0m
test_dummies.R................ 2 tests <1b>[0;32mOK<1b>[0m <1b>[0;34m12.3s<1b>[0m
test_locations.R.............. 0 tests
test_locations.R.............. 0 tests
test_locations.R.............. 0 tests
test_locations.R.............. 0 tests
test_locations.R.............. 0 tests
test_locations.R.............. 0 tests
test_locations.R.............. 0 tests
test_locations.R.............. 0 tests
test_locations.R.............. 0 tests
test_locations.R.............. 0 tests
test_locations.R.............. 0 tests
test_locations.R.............. 0 tests
test_locations.R.............. 0 tests
test_locations.R.............. 0 tests Error in { : task 1 failed - "[expanse] input crs is not valid"
Calls: <Anonymous> ... FUN -> eval -> eval -> locations -> %ps% -> <Anonymous>
Execution halted
Flavor: r-patched-solaris-x86
Version: 1.0.0
Check: examples
Result: ERROR
Running examples in ‘rassta-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: engine
> ### Title: Spatial Modeling Engine
> ### Aliases: engine
>
> ### ** Examples
>
> require(terra)
Loading required package: terra
terra version 1.4.7
> p <- system.file("exdat", package = "rassta")
> # Multi-layer SpatRaster of landscape similarities
> fls <- list.files(path = p, pattern = "su_", full.names = TRUE)
> ls <- terra::rast(fls)
> # Numeric code and representative response value for stratification units
> fro <-list.files(path = p, pattern = "repobs.csv", full.names = TRUE)
> ro <- read.csv(fro)
> # Extract only those stratification units with representative value
> ls <- ls[[as.character(ro$SU)]]
> # SpatVector with processing tiles
> fti <- list.files(path = p, pattern = "tiles.shp", full.names = TRUE)
> ti <- terra::vect(fti)
> # Perform spatial modeling of continuous response
> r <- engine(res.type = "cont", ls.rast = ls, n.win = 2, su.repobs = ro,
+ tiles = ti, outdir = p, overwrite = TRUE
+ )
Warning: Attempt to create new tiff file `/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/rassta/exdat/soc_tile1.tif' failed: Read-only file system (GDAL error 4)
Warning: Attempt to create new tiff file `/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/rassta/exdat/soc_tile2.tif' failed: Read-only file system (GDAL error 4)
Warning: Attempt to create new tiff file `/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/rassta/exdat/soc_tile3.tif' failed: Read-only file system (GDAL error 4)
Warning: Attempt to create new tiff file `/home/hornik/tmp/R.check/r-release-gcc/Work/build/Packages/rassta/exdat/soc_tile4.tif' failed: Read-only file system (GDAL error 4)
Error in { :
task 1 failed - "task 1 failed - "[writeRaster] failed writing GTiff file""
Calls: engine -> %ps% -> <Anonymous>
Execution halted
Flavor: r-release-linux-x86_64
Version: 1.0.0
Check: package dependencies
Result: ERROR
Packages required and available but unsuitable versions:
'grDevices', 'stats', 'utils'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavors: r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64