Output from running autoreconf:
  configure.ac:27: warning: AC_OUTPUT should be used without arguments.
  configure.ac:27: You should run autoupdate.
Output from running autoreconf:
  configure.ac:27: warning: AC_OUTPUT should be used without arguments.
  configure.ac:27: You should run autoupdate.
installed size is  5.6Mb
  sub-directories of 1Mb or more:
    data   2.5Mb
    doc    1.5Mb
Output from running autoreconf:
  configure.ac:27: warning: AC_OUTPUT should be used without arguments.
  configure.ac:27: You should run autoupdate.
  configure.ac:27: warning: AC_OUTPUT should be used without arguments.
  configure.ac:27: You should run autoupdate.
Namespace in Imports field not imported from: ‘Rdpack’
  All declared Imports should be used.
Output from running autoreconf:
  configure.ac:27: warning: AC_OUTPUT should be used without arguments.
  configure.ac:27: You should run autoupdate.
  configure.ac:27: warning: AC_OUTPUT should be used without arguments.
  configure.ac:27: You should run autoupdate.
Namespace in Imports field not imported from: ‘Rdpack’
  All declared Imports should be used.
installed size is  5.6Mb
  sub-directories of 1Mb or more:
    data   2.5Mb
    doc    1.5Mb
Namespace in Imports field not imported from: 'Rdpack'
  All declared Imports should be used.
Output from running autoreconf:
  configure.ac:27: warning: AC_OUTPUT should be used without arguments.
  configure.ac:27: You should run autoupdate.
installed size is  5.6Mb
  sub-directories of 1Mb or more:
    data   2.5Mb
    doc    1.5Mb
Namespace in Imports field not imported from: ‘Rdpack’
  All declared Imports should be used.
Output from running autoreconf:
  configure.ac:27: warning: AC_OUTPUT should be used without arguments.
  configure.ac:27: You should run autoupdate.
installed size is  8.0Mb
  sub-directories of 1Mb or more:
    data   2.5Mb
    doc    1.5Mb
    libs   3.0Mb
Namespace in Imports field not imported from: ‘Rdpack’
  All declared Imports should be used.
installed size is  8.1Mb
  sub-directories of 1Mb or more:
    data   2.5Mb
    doc    1.5Mb
    libs   3.1Mb
Namespace in Imports field not imported from: ‘Rdpack’
  All declared Imports should be used.
installed size is  6.2Mb
  sub-directories of 1Mb or more:
    data   2.5Mb
    doc    1.5Mb
    libs   1.2Mb
installed size is  8.1Mb
  sub-directories of 1Mb or more:
    data   2.5Mb
    doc    1.5Mb
    libs   3.1Mb
Namespace in Imports field not imported from: ‘Rdpack’
  All declared Imports should be used.
installed size is  6.2Mb
  sub-directories of 1Mb or more:
    data   2.5Mb
    doc    1.5Mb
    libs   1.2Mb
Running examples in 'dynr-Ex.R' failed
The error most likely occurred in:

> ### Name: coef.dynrModel
> ### Title: Extract fitted parameters from a dynrCook Object
> ### Aliases: coef.dynrCook coef.dynrModel coef<- coef<-.dynrModel
> 
> ### ** Examples
> 
> # Create a minimal cooked model called 'cook'
> require(dynr)
> 
> meas <- prep.measurement(
+ 	values.load=matrix(c(1, 0), 1, 2),
+ 	params.load=matrix(c('fixed', 'fixed'), 1, 2),
+ 	state.names=c("Position","Velocity"),
+ 	obs.names=c("y1"))
> 
> ecov <- prep.noise(
+ 	values.latent=diag(c(0, 1), 2),
+ 	params.latent=diag(c('fixed', 'dnoise'), 2),
+ 	values.observed=diag(1.5, 1),
+ 	params.observed=diag('mnoise', 1))
> 
> initial <- prep.initial(
+ 	values.inistate=c(0, 1),
+ 	params.inistate=c('inipos', 'fixed'),
+ 	values.inicov=diag(1, 2),
+ 	params.inicov=diag('fixed', 2))
> 
> dynamics <- prep.matrixDynamics(
+ 	values.dyn=matrix(c(0, -0.1, 1, -0.2), 2, 2),
+ 	params.dyn=matrix(c('fixed', 'spring', 'fixed', 'friction'), 2, 2),
+ 	isContinuousTime=TRUE)
> 
> data(Oscillator)
> data <- dynr.data(Oscillator, id="id", time="times", observed="y1")
> 
> model <- dynr.model(dynamics=dynamics, measurement=meas,
+ 	noise=ecov, initial=initial, data=data)
> 
> cook <- dynr.cook(model,
+ 	verbose=FALSE, optimization_flag=FALSE, hessian_flag=FALSE)
Warning in file(file, ifelse(append, "a", "w")) :
  cannot open file 'D:/temp/RtmpKSSQ/file18dcc15d337bd.c': No such file or directory
Error in file(file, ifelse(append, "a", "w")) : 
  cannot open the connection
Calls: dynr.cook ... .C2funcaddress -> CompileCode -> write -> cat -> file
Execution halted