Last updated on 2022-02-23 07:52:08 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.2.0 | 6.71 | 60.21 | 66.92 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.2.0 | 5.38 | 47.21 | 52.59 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.2.0 | 84.40 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 1.2.0 | 71.21 | ERROR | |||
| r-devel-windows-x86_64-new-UL | 1.2.0 | 66.00 | 87.00 | 153.00 | ERROR | |
| r-devel-windows-x86_64-new-TK | 1.2.0 | ERROR | ||||
| r-patched-linux-x86_64 | 1.2.0 | OK | ||||
| r-release-linux-x86_64 | 1.2.0 | 5.05 | 56.55 | 61.60 | OK | |
| r-release-macos-arm64 | 1.2.0 | NOTE | ||||
| r-release-macos-x86_64 | 1.2.0 | NOTE | ||||
| r-release-windows-ix86+x86_64 | 1.2.0 | 16.00 | 74.00 | 90.00 | OK | |
| r-oldrel-macos-x86_64 | 1.2.0 | NOTE | ||||
| r-oldrel-windows-ix86+x86_64 | 1.2.0 | 16.00 | 69.00 | 85.00 | OK |
Version: 1.2.0
Check: examples
Result: ERROR
Running examples in 'algaeClassify-Ex.R' failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: phyto_ts_aggregate
> ### Title: Aggregate phytoplankton timeseries based on abundance. Up to 3
> ### grouping variables can be given: e.g. genus, species, stationid,
> ### depth range. If no abundance var is given, will aggregate to
> ### presence/absence of grouping vars.
> ### Aliases: phyto_ts_aggregate
>
> ### ** Examples
>
> data(lakegeneva)
> lakegeneva<-genus_species_extract(lakegeneva,'phyto_name')
> lg.genera=phyto_ts_aggregate(lakegeneva,SummaryType='presence.absence',
+ GroupingVar1='genus')
Error in aggregate.formula(formula = agg.func, data = phyto.data, FUN = fun) :
argument 'x' is missing -- it has been renamed from 'formula'
Calls: phyto_ts_aggregate -> <Anonymous> -> aggregate.formula
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 1.2.0
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from: ‘taxize’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64-new-TK, r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-x86_64
Version: 1.2.0
Check: examples
Result: ERROR
Running examples in ‘algaeClassify-Ex.R’ failed
The error most likely occurred in:
> ### Name: phyto_ts_aggregate
> ### Title: Aggregate phytoplankton timeseries based on abundance. Up to 3
> ### grouping variables can be given: e.g. genus, species, stationid,
> ### depth range. If no abundance var is given, will aggregate to
> ### presence/absence of grouping vars.
> ### Aliases: phyto_ts_aggregate
>
> ### ** Examples
>
> data(lakegeneva)
> lakegeneva<-genus_species_extract(lakegeneva,'phyto_name')
> lg.genera=phyto_ts_aggregate(lakegeneva,SummaryType='presence.absence',
+ GroupingVar1='genus')
Error in aggregate.formula(formula = agg.func, data = phyto.data, FUN = fun) :
argument 'x' is missing -- it has been renamed from 'formula'
Calls: phyto_ts_aggregate -> <Anonymous> -> aggregate.formula
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64-new-UL, r-devel-windows-x86_64-new-TK