CRAN Package Check Results for Package prider

Last updated on 2022-02-24 06:49:59 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.2 21.66 63.25 84.91 ERROR
r-devel-linux-x86_64-debian-gcc 1.0.2 18.80 47.43 66.23 ERROR
r-devel-linux-x86_64-fedora-clang 1.0.2 110.38 ERROR
r-devel-linux-x86_64-fedora-gcc 1.0.2 94.98 ERROR
r-devel-windows-x86_64-new-UL 1.0.2 35.00 96.00 131.00 ERROR
r-devel-windows-x86_64-new-TK 1.0.2 ERROR
r-patched-linux-x86_64 1.0.2 ERROR
r-release-linux-x86_64 1.0.2 19.69 57.78 77.47 ERROR
r-release-macos-arm64 1.0.2 OK
r-release-macos-x86_64 1.0.2 OK
r-release-windows-ix86+x86_64 1.0.2 56.00 107.00 163.00 ERROR
r-oldrel-macos-x86_64 1.0.2 OK
r-oldrel-windows-ix86+x86_64 1.0.2 58.00 111.00 169.00 ERROR

Check Details

Version: 1.0.2
Check: examples
Result: ERROR
    Running examples in 'prider-Ex.R' failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: prider
    > ### Title: Prider
    > ### Aliases: prider print.prider plot.prider
    >
    > ### ** Examples
    >
    > test_fasta <- system.file('extdata', 'test.fasta', package = 'prider')
    >
    > # Runs Prider with the default values:
    > primer_designs <- prider(test_fasta)
    Preparing primer candidates...
    
    Clustering primers...
    
    Sampling primers...
    
    Eliminating redundancies...
    
    Error in `dplyr::slice_max()`:
    ! Problem while computing indices.
    i The error occurred in group 1: Cumulative_coverage = 0.44.
    Caused by error:
    ! `order_by` must have size 15, not size 1.
    Backtrace:
     x
     1. +-prider::prider(test_fasta)
     2. | \-... %>% dplyr::ungroup(.)
     3. +-dplyr::ungroup(.)
     4. +-dplyr::select(...)
     5. +-dplyr::slice_max(., 1)
     6. +-dplyr:::slice_max.data.frame(., 1)
     7. | +-dplyr::slice(...)
     8. | \-dplyr:::slice.data.frame(...)
     9. | \-dplyr:::slice_rows(.data, ..., caller_env = caller_env(), error_call = current_env())
     10. | \-dplyr:::slice_eval(mask, dots, error_call = error_call)
     11. | +-base::withCallingHandlers(...)
     12. | \-mask$eval_all(quo(impl(!!!dots)))
     13. +-dplyr impl(...)
     14. | \-dplyr:::...elt2(i)
     15. | \-rlang::eval_bare(sym(paste0("..", i)), frame)
     16. +-rlang local(...)
     17. \-base::local(...)
     18. \-base::eval.parent(substitute(eval(quote(expr), envir)))
     19. \-base::eval(expr, p)
     20. \-base::eval(expr, p)
     21. \-base::eval(...)
     22. \-base::eval(...)
     23. +-dplyr:::fix_call(...)
     24. | \-base::withCallingHandlers(...)
     25. \-vctrs::vec_assert(order_by, size = n, arg = "order_by")
     26. \-rlang::abort(...)
    Execution halted
Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.0.2
Check: examples
Result: ERROR
    Running examples in ‘prider-Ex.R’ failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: prider
    > ### Title: Prider
    > ### Aliases: prider print.prider plot.prider
    >
    > ### ** Examples
    >
    > test_fasta <- system.file('extdata', 'test.fasta', package = 'prider')
    >
    > # Runs Prider with the default values:
    > primer_designs <- prider(test_fasta)
    Preparing primer candidates...
    
    Clustering primers...
    
    Sampling primers...
    
    Eliminating redundancies...
    
    Error in `dplyr::slice_max()`:
    ! Problem while computing indices.
    ℹ The error occurred in group 1: Cumulative_coverage = 0.44.
    Caused by error:
    ! `order_by` must have size 15, not size 1.
    Backtrace:
     ▆
     1. ├─prider::prider(test_fasta)
     2. │ └─... %>% dplyr::ungroup(.)
     3. ├─dplyr::ungroup(.)
     4. ├─dplyr::select(...)
     5. ├─dplyr::slice_max(., 1)
     6. ├─dplyr:::slice_max.data.frame(., 1)
     7. │ ├─dplyr::slice(...)
     8. │ └─dplyr:::slice.data.frame(...)
     9. │ └─dplyr:::slice_rows(.data, ..., caller_env = caller_env(), error_call = current_env())
     10. │ └─dplyr:::slice_eval(mask, dots, error_call = error_call)
     11. │ ├─base::withCallingHandlers(...)
     12. │ └─mask$eval_all(quo(impl(!!!dots)))
     13. ├─dplyr impl(...)
     14. │ └─dplyr:::...elt2(i)
     15. │ └─rlang::eval_bare(sym(paste0("..", i)), frame)
     16. ├─rlang local(...)
     17. └─base::local(...)
     18. └─base::eval.parent(substitute(eval(quote(expr), envir)))
     19. └─base::eval(expr, p)
     20. └─base::eval(expr, p)
     21. └─base::eval(...)
     22. └─base::eval(...)
     23. ├─dplyr:::fix_call(...)
     24. │ └─base::withCallingHandlers(...)
     25. └─vctrs::vec_assert(order_by, size = n, arg = "order_by")
     26. └─rlang::abort(...)
    Execution halted
Flavors: r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 1.0.2
Check: examples
Result: ERROR
    Running examples in ‘prider-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: prider
    > ### Title: Prider
    > ### Aliases: prider print.prider plot.prider
    >
    > ### ** Examples
    >
    > test_fasta <- system.file('extdata', 'test.fasta', package = 'prider')
    >
    > # Runs Prider with the default values:
    > primer_designs <- prider(test_fasta)
    Preparing primer candidates...
    
    Clustering primers...
    
    Sampling primers...
    
    Eliminating redundancies...
    
    Error in `dplyr::slice_max()`:
    ! Problem while computing indices.
    ℹ The error occurred in group 1: Cumulative_coverage = 0.44.
    Caused by error:
    ! `order_by` must have size 15, not size 1.
    Backtrace:
     ▆
     1. ├─prider::prider(test_fasta)
     2. │ └─... %>% dplyr::ungroup(.)
     3. ├─dplyr::ungroup(.)
     4. ├─dplyr::select(...)
     5. ├─dplyr::slice_max(., 1)
     6. ├─dplyr:::slice_max.data.frame(., 1)
     7. │ ├─dplyr::slice(...)
     8. │ └─dplyr:::slice.data.frame(...)
     9. │ └─dplyr:::slice_rows(.data, ..., caller_env = caller_env(), error_call = current_env())
     10. │ └─dplyr:::slice_eval(mask, dots, error_call = error_call)
     11. │ ├─base::withCallingHandlers(...)
     12. │ └─mask$eval_all(quo(impl(!!!dots)))
     13. ├─dplyr impl(...)
     14. │ └─dplyr:::...elt2(i)
     15. │ └─rlang::eval_bare(sym(paste0("..", i)), frame)
     16. ├─rlang local(...)
     17. └─base::local(...)
     18. └─base::eval.parent(substitute(eval(quote(expr), envir)))
     19. └─base::eval(expr, p)
     20. └─base::eval(expr, p)
     21. └─base::eval(...)
     22. └─base::eval(...)
     23. ├─dplyr:::fix_call(...)
     24. │ └─base::withCallingHandlers(...)
     25. └─vctrs::vec_assert(order_by, size = n, arg = "order_by")
     26. └─rlang::abort(...)
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64-new-UL, r-devel-windows-x86_64-new-TK

Version: 1.0.2
Check: running examples for arch ‘i386’
Result: ERROR
    Running examples in 'prider-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: prider
    > ### Title: Prider
    > ### Aliases: prider print.prider plot.prider
    >
    > ### ** Examples
    >
    > test_fasta <- system.file('extdata', 'test.fasta', package = 'prider')
    >
    > # Runs Prider with the default values:
    > primer_designs <- prider(test_fasta)
    Preparing primer candidates...
    
    Clustering primers...
    
    Sampling primers...
    
    Eliminating redundancies...
    
    Error in `dplyr::slice_max()`:
    ! Problem while computing indices.
    i The error occurred in group 1: Cumulative_coverage = 0.44.
    Caused by error:
    ! `order_by` must have size 15, not size 1.
    Backtrace:
     x
     1. +-prider::prider(test_fasta)
     2. | \-... %>% dplyr::ungroup(.)
     3. +-dplyr::ungroup(.)
     4. +-dplyr::select(...)
     5. +-dplyr::slice_max(., 1)
     6. +-dplyr:::slice_max.data.frame(., 1)
     7. | +-dplyr::slice(...)
     8. | \-dplyr:::slice.data.frame(...)
     9. | \-dplyr:::slice_rows(.data, ..., caller_env = caller_env(), error_call = current_env())
     10. | \-dplyr:::slice_eval(mask, dots, error_call = error_call)
     11. | +-base::withCallingHandlers(...)
     12. | \-mask$eval_all(quo(impl(!!!dots)))
     13. +-dplyr impl(...)
     14. | \-dplyr:::...elt2(i)
     15. | \-rlang::eval_bare(sym(paste0("..", i)), frame)
     16. +-rlang local(...)
     17. \-base::local(...)
     18. \-base::eval.parent(substitute(eval(quote(expr), envir)))
     19. \-base::eval(expr, p)
     20. \-base::eval(expr, p)
     21. \-base::eval(...)
     22. \-base::eval(...)
     23. +-dplyr:::fix_call(...)
     24. | \-base::withCallingHandlers(...)
     25. \-vctrs::vec_assert(order_by, size = n, arg = "order_by")
     26. \-rlang::abort(...)
    Execution halted
Flavors: r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0.2
Check: running examples for arch ‘x64’
Result: ERROR
    Running examples in 'prider-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: prider
    > ### Title: Prider
    > ### Aliases: prider print.prider plot.prider
    >
    > ### ** Examples
    >
    > test_fasta <- system.file('extdata', 'test.fasta', package = 'prider')
    >
    > # Runs Prider with the default values:
    > primer_designs <- prider(test_fasta)
    Preparing primer candidates...
    
    Clustering primers...
    
    Sampling primers...
    
    Eliminating redundancies...
    
    Error in `dplyr::slice_max()`:
    ! Problem while computing indices.
    i The error occurred in group 1: Cumulative_coverage = 0.44.
    Caused by error:
    ! `order_by` must have size 15, not size 1.
    Backtrace:
     x
     1. +-prider::prider(test_fasta)
     2. | \-... %>% dplyr::ungroup(.)
     3. +-dplyr::ungroup(.)
     4. +-dplyr::select(...)
     5. +-dplyr::slice_max(., 1)
     6. +-dplyr:::slice_max.data.frame(., 1)
     7. | +-dplyr::slice(...)
     8. | \-dplyr:::slice.data.frame(...)
     9. | \-dplyr:::slice_rows(.data, ..., caller_env = caller_env(), error_call = current_env())
     10. | \-dplyr:::slice_eval(mask, dots, error_call = error_call)
     11. | +-base::withCallingHandlers(...)
     12. | \-mask$eval_all(quo(impl(!!!dots)))
     13. +-dplyr impl(...)
     14. | \-dplyr:::...elt2(i)
     15. | \-rlang::eval_bare(sym(paste0("..", i)), frame)
     16. +-rlang local(...)
     17. \-base::local(...)
     18. \-base::eval.parent(substitute(eval(quote(expr), envir)))
     19. \-base::eval(expr, p)
     20. \-base::eval(expr, p)
     21. \-base::eval(...)
     22. \-base::eval(...)
     23. +-dplyr:::fix_call(...)
     24. | \-base::withCallingHandlers(...)
     25. \-vctrs::vec_assert(order_by, size = n, arg = "order_by")
     26. \-rlang::abort(...)
    Execution halted
Flavors: r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64