CRAN Package Check Results for Package mobsim

Last updated on 2022-03-05 09:51:32 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.2.0 25.79 72.34 98.13 ERROR
r-devel-linux-x86_64-debian-gcc 0.2.0 18.34 55.16 73.50 ERROR
r-devel-linux-x86_64-fedora-clang 0.2.0 131.43 ERROR
r-devel-linux-x86_64-fedora-gcc 0.2.0 114.86 ERROR
r-devel-windows-x86_64-new-UL 0.2.0 59.00 141.00 200.00 ERROR
r-devel-windows-x86_64-new-TK 0.2.0 ERROR
r-patched-linux-x86_64 0.2.0 25.93 78.25 104.18 ERROR
r-release-linux-x86_64 0.2.0 23.46 78.34 101.80 ERROR
r-release-macos-arm64 0.2.0 NOTE
r-release-macos-x86_64 0.2.0 NOTE
r-release-windows-ix86+x86_64 0.2.0 66.00 120.00 186.00 ERROR
r-oldrel-macos-x86_64 0.2.0 NOTE
r-oldrel-windows-ix86+x86_64 0.2.0 66.00 121.00 187.00 ERROR

Check Details

Version: 0.2.0
Check: dependencies in R code
Result: WARN
    Missing or unexported object: 'spatstat.core::rmh'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64-new-UL, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-ix86+x86_64

Version: 0.2.0
Check: Rd cross-references
Result: WARN
    Missing link or links in documentation object 'sim_thomas_coords.Rd':
     '[spatstat.core]{rThomas}'
    
    See section 'Cross-references' in the 'Writing R Extensions' manual.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64-new-UL, r-devel-windows-x86_64-new-TK, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.2.0
Check: LazyData
Result: NOTE
     'LazyData' is specified without a 'data' directory
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64-new-UL, r-devel-windows-x86_64-new-TK, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-ix86+x86_64

Version: 0.2.0
Check: examples
Result: ERROR
    Running examples in 'mobsim-Ex.R' failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: dist_decay
    > ### Title: Distance decay of similarity
    > ### Aliases: dist_decay
    >
    > ### ** Examples
    >
    > sim_com1 <- sim_thomas_community(100, 10000, sigma = 0.1, mother_points = 2)
    > dd1 <- dist_decay(sim_com1, prop_area = 0.005, n_samples = 20)
    Error: 'rmh' is not an exported object from 'namespace:spatstat.core'
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.2.0
Check: re-building of vignette outputs
Result: ERROR
    Error(s) in re-building vignettes:
     ...
    --- re-building 'Biodiversity_Changes.Rmd' using rmarkdown
    --- finished re-building 'Biodiversity_Changes.Rmd'
    
    --- re-building 'Biodiversity_Patterns.Rmd' using rmarkdown
    Quitting from lines 168-172 (Biodiversity_Patterns.Rmd)
    Error: processing vignette 'Biodiversity_Patterns.Rmd' failed with diagnostics:
    'rmh' is not an exported object from 'namespace:spatstat.core'
    --- failed re-building 'Biodiversity_Patterns.Rmd'
    
    --- re-building 'Introduction_mobsim.Rmd' using rmarkdown
    Quitting from lines 118-125 (Introduction_mobsim.Rmd)
    Error: processing vignette 'Introduction_mobsim.Rmd' failed with diagnostics:
    'rmh' is not an exported object from 'namespace:spatstat.core'
    --- failed re-building 'Introduction_mobsim.Rmd'
    
    --- re-building 'Sampling_communities.Rmd' using rmarkdown
    Quitting from lines 58-60 (Sampling_communities.Rmd)
    Error: processing vignette 'Sampling_communities.Rmd' failed with diagnostics:
    'rmh' is not an exported object from 'namespace:spatstat.core'
    --- failed re-building 'Sampling_communities.Rmd'
    
    --- re-building 'Simulating_communities.Rmd' using rmarkdown
    --- finished re-building 'Simulating_communities.Rmd'
    
    SUMMARY: processing the following files failed:
     'Biodiversity_Patterns.Rmd' 'Introduction_mobsim.Rmd'
     'Sampling_communities.Rmd'
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 0.2.0
Check: dependencies in R code
Result: WARN
    Namespace in Imports field not imported from: ‘sads’
     All declared Imports should be used.
    Missing or unexported object: ‘spatstat.core::rmh’
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64-new-TK

Version: 0.2.0
Check: examples
Result: ERROR
    Running examples in ‘mobsim-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: dist_decay
    > ### Title: Distance decay of similarity
    > ### Aliases: dist_decay
    >
    > ### ** Examples
    >
    > sim_com1 <- sim_thomas_community(100, 10000, sigma = 0.1, mother_points = 2)
    > dd1 <- dist_decay(sim_com1, prop_area = 0.005, n_samples = 20)
    Error: 'rmh' is not an exported object from 'namespace:spatstat.core'
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64-new-UL, r-devel-windows-x86_64-new-TK

Version: 0.2.0
Check: re-building of vignette outputs
Result: ERROR
    Error(s) in re-building vignettes:
    --- re-building ‘Biodiversity_Changes.Rmd’ using rmarkdown
    --- finished re-building ‘Biodiversity_Changes.Rmd’
    
    --- re-building ‘Biodiversity_Patterns.Rmd’ using rmarkdown
    Quitting from lines 168-172 (Biodiversity_Patterns.Rmd)
    Error: processing vignette 'Biodiversity_Patterns.Rmd' failed with diagnostics:
    'rmh' is not an exported object from 'namespace:spatstat.core'
    --- failed re-building ‘Biodiversity_Patterns.Rmd’
    
    --- re-building ‘Introduction_mobsim.Rmd’ using rmarkdown
    Quitting from lines 118-125 (Introduction_mobsim.Rmd)
    Error: processing vignette 'Introduction_mobsim.Rmd' failed with diagnostics:
    'rmh' is not an exported object from 'namespace:spatstat.core'
    --- failed re-building ‘Introduction_mobsim.Rmd’
    
    --- re-building ‘Sampling_communities.Rmd’ using rmarkdown
    Quitting from lines 58-60 (Sampling_communities.Rmd)
    Error: processing vignette 'Sampling_communities.Rmd' failed with diagnostics:
    'rmh' is not an exported object from 'namespace:spatstat.core'
    --- failed re-building ‘Sampling_communities.Rmd’
    
    --- re-building ‘Simulating_communities.Rmd’ using rmarkdown
    --- finished re-building ‘Simulating_communities.Rmd’
    
    SUMMARY: processing the following files failed:
     ‘Biodiversity_Patterns.Rmd’ ‘Introduction_mobsim.Rmd’
     ‘Sampling_communities.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64-new-UL, r-devel-windows-x86_64-new-TK

Version: 0.2.0
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘Biodiversity_Changes.Rmd’ using rmarkdown
    --- finished re-building ‘Biodiversity_Changes.Rmd’
    
    --- re-building ‘Biodiversity_Patterns.Rmd’ using rmarkdown
    Quitting from lines 168-172 (Biodiversity_Patterns.Rmd)
    Error: processing vignette 'Biodiversity_Patterns.Rmd' failed with diagnostics:
    ‘rmh’ is not an exported object from ‘namespace:spatstat.core’
    --- failed re-building ‘Biodiversity_Patterns.Rmd’
    
    --- re-building ‘Introduction_mobsim.Rmd’ using rmarkdown
    Quitting from lines 118-125 (Introduction_mobsim.Rmd)
    Error: processing vignette 'Introduction_mobsim.Rmd' failed with diagnostics:
    ‘rmh’ is not an exported object from ‘namespace:spatstat.core’
    --- failed re-building ‘Introduction_mobsim.Rmd’
    
    --- re-building ‘Sampling_communities.Rmd’ using rmarkdown
    Quitting from lines 58-60 (Sampling_communities.Rmd)
    Error: processing vignette 'Sampling_communities.Rmd' failed with diagnostics:
    ‘rmh’ is not an exported object from ‘namespace:spatstat.core’
    --- failed re-building ‘Sampling_communities.Rmd’
    
    --- re-building ‘Simulating_communities.Rmd’ using rmarkdown
    --- finished re-building ‘Simulating_communities.Rmd’
    
    SUMMARY: processing the following files failed:
     ‘Biodiversity_Patterns.Rmd’ ‘Introduction_mobsim.Rmd’
     ‘Sampling_communities.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.2.0
Check: dependencies in R code
Result: NOTE
    Namespace in Imports field not imported from: ‘sads’
     All declared Imports should be used.
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-x86_64

Version: 0.2.0
Check: running examples for arch ‘i386’
Result: ERROR
    Running examples in 'mobsim-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: dist_decay
    > ### Title: Distance decay of similarity
    > ### Aliases: dist_decay
    >
    > ### ** Examples
    >
    > sim_com1 <- sim_thomas_community(100, 10000, sigma = 0.1, mother_points = 2)
    > dd1 <- dist_decay(sim_com1, prop_area = 0.005, n_samples = 20)
    Error: 'rmh' is not an exported object from 'namespace:spatstat.core'
    Execution halted
Flavors: r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.2.0
Check: running examples for arch ‘x64’
Result: ERROR
    Running examples in 'mobsim-Ex.R' failed
    The error most likely occurred in:
    
    > ### Name: dist_decay
    > ### Title: Distance decay of similarity
    > ### Aliases: dist_decay
    >
    > ### ** Examples
    >
    > sim_com1 <- sim_thomas_community(100, 10000, sigma = 0.1, mother_points = 2)
    > dd1 <- dist_decay(sim_com1, prop_area = 0.005, n_samples = 20)
    Error: 'rmh' is not an exported object from 'namespace:spatstat.core'
    Execution halted
Flavors: r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.2.0
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building 'Biodiversity_Changes.Rmd' using rmarkdown
    --- finished re-building 'Biodiversity_Changes.Rmd'
    
    --- re-building 'Biodiversity_Patterns.Rmd' using rmarkdown
    Quitting from lines 168-172 (Biodiversity_Patterns.Rmd)
    Error: processing vignette 'Biodiversity_Patterns.Rmd' failed with diagnostics:
    'rmh' is not an exported object from 'namespace:spatstat.core'
    --- failed re-building 'Biodiversity_Patterns.Rmd'
    
    --- re-building 'Introduction_mobsim.Rmd' using rmarkdown
    Quitting from lines 118-125 (Introduction_mobsim.Rmd)
    Error: processing vignette 'Introduction_mobsim.Rmd' failed with diagnostics:
    'rmh' is not an exported object from 'namespace:spatstat.core'
    --- failed re-building 'Introduction_mobsim.Rmd'
    
    --- re-building 'Sampling_communities.Rmd' using rmarkdown
    Quitting from lines 58-60 (Sampling_communities.Rmd)
    Error: processing vignette 'Sampling_communities.Rmd' failed with diagnostics:
    'rmh' is not an exported object from 'namespace:spatstat.core'
    --- failed re-building 'Sampling_communities.Rmd'
    
    --- re-building 'Simulating_communities.Rmd' using rmarkdown
    --- finished re-building 'Simulating_communities.Rmd'
    
    SUMMARY: processing the following files failed:
     'Biodiversity_Patterns.Rmd' 'Introduction_mobsim.Rmd'
     'Sampling_communities.Rmd'
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-release-windows-ix86+x86_64, r-oldrel-windows-ix86+x86_64

Version: 0.2.0
Check: dependencies in R code
Result: NOTE
    Missing or unexported object: 'spatstat.core::rmh'
Flavor: r-oldrel-windows-ix86+x86_64