Last updated on 2022-03-07 06:48:38 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1-7 | 6.39 | 125.75 | 132.14 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 1.1-7 | 3.90 | 93.92 | 97.82 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 1.1-7 | 162.40 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1-7 | 148.11 | NOTE | |||
| r-devel-windows-x86_64-new-UL | 1.1-7 | 24.00 | 145.00 | 169.00 | NOTE | |
| r-devel-windows-x86_64-new-TK | 1.1-7 | NOTE | ||||
| r-patched-linux-x86_64 | 1.1-7 | 5.57 | 122.04 | 127.61 | NOTE | |
| r-release-linux-x86_64 | 1.1-7 | NOTE | ||||
| r-release-macos-arm64 | 1.1-7 | NOTE | ||||
| r-release-macos-x86_64 | 1.1-7 | NOTE | ||||
| r-release-windows-ix86+x86_64 | 1.1-7 | 9.00 | 149.00 | 158.00 | NOTE | |
| r-oldrel-macos-x86_64 | 1.1-7 | NOTE | ||||
| r-oldrel-windows-ix86+x86_64 | 1.1-7 | 9.00 | 146.00 | 155.00 | NOTE |
Version: 1.1-7
Check: top-level files
Result: NOTE
Non-standard files/directories found at top level:
'docs' 'license.txt' 'status.txt'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64
Version: 1.1-7
Check: dependencies in R code
Result: NOTE
'library' or 'require' call to 'qtl' which was already attached by Depends.
Please remove these calls from your code.
Unexported objects imported by ':::' calls:
'qtl:::c.scanone' 'qtl:::plot.scanone'
See the note in ?`:::` about the use of this operator.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64-new-UL, r-devel-windows-x86_64-new-TK, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64
Version: 1.1-7
Check: R code for possible problems
Result: NOTE
calc.Rsq : write.lm: no visible global function definition for 'combn'
calc.Rsq: no visible global function definition for 'anova'
calc.Rsq: no visible global function definition for 'lm'
calc.Rsq: no visible global function definition for 'as.formula'
define.peak: no visible global function definition for 'png'
define.peak: no visible global function definition for 'abline'
define.peak: no visible global function definition for 'dev.off'
genoplot: no visible global function definition for 'png'
genoplot: no visible global function definition for 'par'
genoplot: no visible global function definition for 'hist'
genoplot: no visible global function definition for 'axis'
genoplot: no visible global function definition for 'abline'
genoplot: no visible global function definition for 'box'
genoplot: no visible global function definition for 'dev.off'
genoplot : gqplot: no visible global function definition for 'png'
genoplot : gqplot: no visible global function definition for 'axis'
genoplot : gqplot: no visible global function definition for 'abline'
genoplot : gqplot: no visible global function definition for 'box'
genoplot : gqplot: no visible global function definition for 'dev.off'
genoplot : gqplot: no visible global function definition for 'matplot'
genoplot: no visible global function definition for 'rainbow'
peaksummary: no visible global function definition for 'pie'
peaksummary: no visible global function definition for 'barplot'
peaksummary: no visible global function definition for 'median'
peaksummary: no visible global function definition for 'var'
peaksummary: no visible global function definition for 'boxplot'
peaksummary: no visible binding for global variable 'median'
peaksummary: no visible binding for global variable 'var'
peaksummary: no visible global function definition for 'hist'
plotRsq: no visible global function definition for 'hist'
Undefined global functions or variables:
abline anova as.formula axis barplot box boxplot combn dev.off hist
lm matplot median par pie png rainbow var
Consider adding
importFrom("grDevices", "dev.off", "png", "rainbow")
importFrom("graphics", "abline", "axis", "barplot", "box", "boxplot",
"hist", "matplot", "par", "pie")
importFrom("stats", "anova", "as.formula", "lm", "median", "var")
importFrom("utils", "combn")
to your NAMESPACE file.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64-new-UL, r-devel-windows-x86_64-new-TK, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-ix86+x86_64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64
Version: 1.1-7
Check: for non-standard things in the check directory
Result: NOTE
Found the following files/directories:
'CATane_4_27_.png' 'CATavz_4_37_.png' 'CATbaa_4_13_.png'
'CATbko_4_36_.png' 'CATbuu_1_45_.png' 'CATbuu_4_45_.png'
'CATbuu_5_45_.png' 'CATbzp_4_50_.png' 'CATbzx_4_29_.png'
'CATdbn_1_18_.png' 'CATdbn_3_18_.png' 'CATdmq_4_49_.png'
'CATepg_4_44_.png' 'CATfgb_4_7_.png' 'CATfgb_5_7_.png'
'CATfnu_4_21_.png' 'CATfnu_5_21_.png' 'CATham_4_14_.png'
'CATham_5_14_.png' 'CATipy_4_19_.png' 'CATjoj_2_22_.png'
'CATjpz_4_35_.png' 'CATjxh_1_31_.png' 'CATlbg_4_40_.png'
'CATlkr_4_32_.png' 'CATlzh_4_43_.png' 'CATntj_4_24_.png'
'CAToti_5_28_.png' 'CATppt_4_4_.png' 'CATppt_5_4_.png'
'CATpsl_4_23_.png' 'CATpyn_4_20_.png' 'CATqoq_4_8_.png'
'CATrck_4_26_.png' 'CATrjo_4_30_.png' 'CATsgu_4_9_.png'
'CATsgu_5_9_.png' 'CATtez_4_34_.png' 'CATudg_4_16_.png'
'CATuhl_4_39_.png' 'CATuhl_5_39_.png' 'CATvbb_4_41_.png'
'CATwgo_4_17_.png' 'CATwgo_5_17_.png' 'CATwrn_4_46_.png'
'CATwwh_4_10_.png' 'CATxmc_2_48_.png' 'CATxni_5_6_.png' 'ID_5_1_.png'
'ae_dotplot_traitxqtl.png' 'ae_siplot_traitxqtl.png'
'histogram_controled_etrait.png' 'histogram_qtl.png'
'lod_dotplot_traitxqtl.png' 'lod_siplot_traitxqtl.png'
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-linux-x86_64